Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12a21
(623 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 202 2e-53
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 105 7e-24
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 103 2e-23
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 103 3e-23
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 103 3e-23
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 93 2e-20
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 93 3e-20
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 91 1e-19
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 90 2e-19
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 83 2e-17
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 74 2e-14
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 73 4e-14
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 67 2e-12
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 49 6e-07
SPAC23G3.09 |taf4||transcription factor TFIID complex subunit Ta... 28 1.3
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 27 2.9
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 3.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 6.7
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 25 6.7
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 25 8.9
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 202 bits (494), Expect = 2e-53
Identities = 89/100 (89%), Positives = 93/100 (93%)
Frame = +1
Query: 283 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 462
MALKRINREL DLG+DPP+ CSAGP G+DLFHWQATIMGP DSPY GGVFFL+IHFPTDY
Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDY 60
Query: 463 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTIS 582
PFKPPKV FTTRIYHPNINSNGSICLDILR QWSPALTIS
Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTIS 100
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 584 KVLLSICSLLCDP 622
KVLLSICSLL DP
Sbjct: 101 KVLLSICSLLTDP 113
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 105 bits (251), Expect = 7e-24
Identities = 46/115 (40%), Positives = 73/115 (63%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 456
S A +R+ R+ + + +DPPA SA P +++ W A I+GP D+P++ G F L + F
Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDE 61
Query: 457 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISXSVALNLLTSMRS 621
YP KPP V F + ++HPN+ +NG +CLDIL+ +WSP ++ +LTS++S
Sbjct: 62 QYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAA-----ILTSIQS 111
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 103 bits (248), Expect = 2e-23
Identities = 45/101 (44%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +1
Query: 292 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 471
+RI +EL D+ +D A +D+ H + GP +PY+GG F + I P DYPF+
Sbjct: 7 RRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFR 66
Query: 472 PPKVAFTTRIYHPNINS-NGSICLDILRAQWSPALTISXSV 591
PPK+ F T+IYHPN++S G+ICLDIL+ QWSP T+ ++
Sbjct: 67 PPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSAL 107
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 103 bits (246), Expect = 3e-23
Identities = 48/100 (48%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Frame = +1
Query: 283 MAL-KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 459
MAL KRI +E++ L RDPP A P ++L +++ T+ GP S Y+GG F L + P +
Sbjct: 1 MALPKRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDE 60
Query: 460 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTI 579
YP PP V F T+IYHPN++ G ICL L+ WSPAL I
Sbjct: 61 YPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQI 100
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 103 bits (246), Expect = 3e-23
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 456
S + +R+ +E DL P ++LFHW T +GP DS Y GG F ++ FP
Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPL 64
Query: 457 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPALTISXSVALNLLTSMR 618
DYPF+PP + FTTRIYHPN +S G++CL IL+ Q + P++ + SV +L +R
Sbjct: 65 DYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKL-RSVLEQILQLLR 118
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 93.5 bits (222), Expect = 2e-20
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +1
Query: 367 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 543
D+FHW+A I GP ++PY+GG + L IH YP PP V F T+I HPNI+ +NG +C+D
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMD 92
Query: 544 ILRAQWSPALTI 579
IL+ WSPA ++
Sbjct: 93 ILKTHWSPAWSL 104
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 93.1 bits (221), Expect = 3e-20
Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 INRELQDLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP 474
+ ++L+++ ++PP S G + +F W+ I+GP D+ Y+GG F T+ FP DYP P
Sbjct: 10 LRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMP 69
Query: 475 PKVAFTTRIYHPNINSNGSICLDIL 549
PK+ FTT I+HPN++ NG +C+ IL
Sbjct: 70 PKMKFTTEIWHPNVHPNGEVCISIL 94
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 91.1 bits (216), Expect = 1e-19
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Frame = +1
Query: 292 KRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 468
KR+ EL L SA P + +L HW TI GP D+ Y+G F +++ FP +YP+
Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPY 90
Query: 469 KPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISXSVALNL 603
PP + FT+ ++HPN++ +G+ICLDIL+ +WS + ++ L+L
Sbjct: 91 SPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQ-TILLSL 134
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 90.2 bits (214), Expect = 2e-19
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +1
Query: 283 MALKRINRELQDLGRDPPAQCSAGPHGED-LFHWQATIMGPVDSPYQGGVFFLTIHFPTD 459
MAL+R+ +E ++L + P +AGP ED F W I GP +P++GG++ T+ FP+D
Sbjct: 5 MALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSD 64
Query: 460 YPFKPPKVAFTTRIYHPNINSNGSICLDILRA 555
YP PP + F +HPN+ +G++C+ IL A
Sbjct: 65 YPLGPPTLKFECEFFHPNVYKDGTVCISILHA 96
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 83.4 bits (197), Expect = 2e-17
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPP-----AQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLT 441
S + R+ E + RD P C + G DL +W+ I G + ++GG++ LT
Sbjct: 2 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLT 61
Query: 442 IHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ--WSPALTI 579
+ FP +YP +PPK FT ++HPN+ +G++CL IL + W PA+TI
Sbjct: 62 MAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITI 109
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 73.7 bits (173), Expect = 2e-14
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +1
Query: 397 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSP 567
GP ++PY GG++ + + P++YP+K P + F RI+HPNI+ +GS+CLD++ WSP
Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSP 95
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 72.5 bits (170), Expect = 4e-14
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 456
S+ A KR+ +E L ++P A P E++ W I GP D+PY+GG + T+ FP
Sbjct: 3 SKGAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPP 62
Query: 457 DYPFKPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISXSVALNLLTSMRS 621
DYPFKPP + T +N +CL D W+P+ +S ++ + L++ M S
Sbjct: 63 DYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNPSWMVS-TILVGLVSFMTS 117
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 67.3 bits (157), Expect = 2e-12
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 400 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTI 579
P + Y+GG F I +YP PPKV +IYHPNI+ G++CL+ILR W+P L +
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNL 119
Query: 580 -SXSVALNLL 606
S V L L
Sbjct: 120 NSILVGLQFL 129
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 48.8 bits (111), Expect = 6e-07
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Frame = +1
Query: 337 AQCSAGPHGED---LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 507
+ CS G D L W ATI+GP S ++ ++ L IH +YP PP V F +RI
Sbjct: 24 SSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINL 83
Query: 508 PNIN-SNGSI---CLDILRAQWSPALTISXSVALNLLTSMRS 621
P ++ G + +D LR W ++ +V L+L M S
Sbjct: 84 PGVDGETGKVNPHKIDCLR-HWKREYSME-TVLLDLKKEMAS 123
>SPAC23G3.09 |taf4||transcription factor TFIID complex subunit
Taf4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 274 NSQMALKRINRELQDLGRDPPAQCSAG---PHGEDLFHWQATIMGPVDSPYQGGVF 432
+S A K I+ + Q+ + A AG P G + W AT M P+ +P GG F
Sbjct: 246 SSSAAAKNISEDAQNRMTNATASIMAGSALPSGGKKYSWMATDMTPM-TPAVGGGF 300
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 26.6 bits (56), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +2
Query: 338 HNVRQAHTVKIC---SIGKPQLWAQLTVLIKEEFSSLPYISLQTTLSNHQ 478
H V +T C ++ P LWA L + F Y L+T N+Q
Sbjct: 406 HTVFSGYTTVWCPQNAVFVPGLWANLATRYRASFMLTDYAGLKTIAYNYQ 455
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 454 TDYPFKPPKVAFTTRIYHPNINSN 525
TD FKP + T +++P+I +N
Sbjct: 113 TDKKFKPNDTSITANVFNPSIQNN 136
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 6.7
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 162 DFGGTFAFRQGAILQSLIKGPWL 230
D G+ +FR+G ++++L G W+
Sbjct: 943 DDNGSLSFREGVLVEALRNGYWI 965
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +1
Query: 352 GPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 504
G HG LF M P PY+G T H + ++ + TT Y
Sbjct: 146 GYHGNTLFALSVGGMKPRKQPYEGVFSHTTSHVSPCFEYRYKENGETTEEY 196
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.0 bits (52), Expect = 8.9
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 361 RVGLPNIVLVDPCPDL 314
RV L +IV ++PCPD+
Sbjct: 113 RVRLGDIVTINPCPDI 128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,678,572
Number of Sequences: 5004
Number of extensions: 57329
Number of successful extensions: 142
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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