Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12a21
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 211 3e-55
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 211 3e-55
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 103 8e-23
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 103 8e-23
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 101 4e-22
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 100 7e-22
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 87 1e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 86 2e-17
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 86 2e-17
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 84 9e-17
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 83 1e-16
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 73 1e-13
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 73 1e-13
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 69 3e-12
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 66 3e-11
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 66 3e-11
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 65 4e-11
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 62 2e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 61 7e-10
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 60 1e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 55 4e-08
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 54 1e-07
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 43 2e-04
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 2.7
AL032639-9|CAA21633.1| 303|Caenorhabditis elegans Hypothetical ... 28 4.7
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 211 bits (515), Expect = 3e-55
Identities = 93/100 (93%), Positives = 97/100 (97%)
Frame = +1
Query: 283 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 462
MALKRI +ELQDLGRDPPAQCSAGP G+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDY
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 463 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTIS 582
PFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALTIS
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTIS 100
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 584 KVLLSICSLLCDP 622
KVLLSICSLLCDP
Sbjct: 101 KVLLSICSLLCDP 113
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 211 bits (515), Expect = 3e-55
Identities = 93/100 (93%), Positives = 97/100 (97%)
Frame = +1
Query: 283 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 462
MALKRI +ELQDLGRDPPAQCSAGP G+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDY
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 463 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTIS 582
PFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALTIS
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTIS 100
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 584 KVLLSICSLLCDP 622
KVLLSICSLLCDP
Sbjct: 101 KVLLSICSLLCDP 113
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 103 bits (248), Expect = 8e-23
Identities = 44/110 (40%), Positives = 73/110 (66%)
Frame = +1
Query: 292 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 471
+R+ R+ + L DPPA S P +++ W+A I GP ++P++ G F L++ F +YP K
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 472 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISXSVALNLLTSMRS 621
PP V F ++++HPN+ ++GSICLDIL+ +WSP ++ +LTS++S
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAA-----ILTSIQS 111
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 103 bits (248), Expect = 8e-23
Identities = 44/110 (40%), Positives = 73/110 (66%)
Frame = +1
Query: 292 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 471
+R+ R+ + L DPPA S P +++ W+A I GP ++P++ G F L++ F +YP K
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 472 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISXSVALNLLTSMRS 621
PP V F ++++HPN+ ++GSICLDIL+ +WSP ++ +LTS++S
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAA-----ILTSIQS 111
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 101 bits (242), Expect = 4e-22
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +1
Query: 283 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTI 444
MALKRI +EL DLGRDPPAQCS G G+DL+HWQATIMGP +SPYQGG+FFLTI
Sbjct: 1 MALKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 100 bits (240), Expect = 7e-22
Identities = 48/96 (50%), Positives = 60/96 (62%)
Frame = +1
Query: 292 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 471
+RI +E Q L DP SA P + ++ I GP DSP+ GGVF L + P +YP
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 472 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTI 579
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQI 102
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +1
Query: 286 ALKRINRELQDLGRDPPAQCSAGPHGED-LFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 462
ALKR+ E ++L PP A P ED F W+ I GP ++ + GVF I FP DY
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 463 PFKPPKVAFTTRIYHPNINSNGSICLDILRA 555
P PPK+ FT I+HPNI ++G +C+ IL A
Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGRVCISILHA 95
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +1
Query: 364 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL 540
E+L + I GP D+PY GG+F L I P YPF PP V F+T+I+HPN++S G ICL
Sbjct: 34 ENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICL 93
Query: 541 DILRAQWSPALTI 579
DIL+ QW+ +LT+
Sbjct: 94 DILKDQWAASLTL 106
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 85.8 bits (203), Expect = 2e-17
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 456
S AL+ + EL++L P + + ++LF W I GP + YQGG F +I FP+
Sbjct: 8 SSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPS 67
Query: 457 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRA 555
+YP+ PP + FTT+++HPN+ NG +C+ IL +
Sbjct: 68 NYPYSPPSMKFTTKVWHPNVYENGDLCISILHS 100
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 83.8 bits (198), Expect = 9e-17
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 INRELQDLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP 474
+ ++L D+ R P SAG D++ W+ ++GP D+ Y+GG F + FP DYP KP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 475 PKVAFTTRIYHPNINSNGSICLDIL 549
PK+ F + I+HPNI+ G++C+ IL
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISIL 92
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 83.4 bits (197), Expect = 1e-16
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Frame = +1
Query: 286 ALKRINRELQDLGR-DPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 462
A +R+ +EL DL A + +L W ++ P PY G F + I FP DY
Sbjct: 3 ATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDY 61
Query: 463 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPALTISXSVALNLLT 609
PFKPPKVAF T+IYHPN++ G CL I+ A+ W PA T + V + LL+
Sbjct: 62 PFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPA-TKTEQVMMALLS 110
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 73.3 bits (172), Expect = 1e-13
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 20/129 (15%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAGPHGE----DLFHWQATIMGPVDSPYQGGVFFLTI 444
S +AL R+ R+ +++ AG H E +L + I GP +PY GG F + +
Sbjct: 16 SNLALARVTRKCKEVANASDIT-EAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKV 74
Query: 445 HFPTDYPFKPPKVA---------------FTTRIYHPNINSN-GSICLDILRAQWSPALT 576
P YPF+PPKV F TRI+HPNI+S G+ICLDIL+ +W+ +LT
Sbjct: 75 DIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLT 134
Query: 577 ISXSVALNL 603
+ +V L+L
Sbjct: 135 L-RTVLLSL 142
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 73.3 bits (172), Expect = 1e-13
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAG--PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHF 450
S A +R+ +EL L + P DL W+ ++G + Y G VF L F
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61
Query: 451 PTDYPFKPPKVAFT--TRIYHPNINSNGSICLDILRAQWSPALTISXSVALNLLTSMRS 621
YPF P+V F T HP+I SNG ICL IL W+PAL++ SV L++L+ + S
Sbjct: 62 GPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQ-SVCLSILSMLSS 119
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 456
S +AL+R+ ++ Q L ++P A P ++ W+ I+G +PY+GG++ + FP
Sbjct: 6 STVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPK 65
Query: 457 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ---WSPALTISXSVALNLLTSM 615
D+PFKPP + T + +N +CL I W+PA T+S ++ L++ M
Sbjct: 66 DFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVS-TIITGLMSFM 118
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +1
Query: 367 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 546
+LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+ +G++CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 547 L--RAQWSPALTI 579
L W P+++I
Sbjct: 97 LDENKDWKPSISI 109
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +1
Query: 367 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 546
+LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+ +G++CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 547 L--RAQWSPALTI 579
L W P+++I
Sbjct: 97 LDENKDWKPSISI 109
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 64.9 bits (151), Expect = 4e-11
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 397 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWS 564
GP D+ Y+ GV+ + + P YPFK P + F +I+HPNI+ ++G++CLD++ W+
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWT 97
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +1
Query: 382 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL-DILRA 555
Q I G ++PY+GG+F L I YPFK P V F T+I+HP+++ +G+ICL D+
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNG 441
Query: 556 QWSPALTI 579
W ++TI
Sbjct: 442 VWPVSMTI 449
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 60.9 bits (141), Expect = 7e-10
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Frame = +1
Query: 391 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-----IYHPNINSNGSICLDIL 549
I GP D+PY G+F I FPT YPF PPK AF T ++PN+ ++G ICL IL
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL 506
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/100 (32%), Positives = 50/100 (50%)
Frame = +1
Query: 247 VESQYNST*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGG 426
+ QYN+ ++R+ +E +L R P A P ++LF W TI G + + ++GG
Sbjct: 1 MSEQYNT---KNAGVRRLMKEAMEL-RQPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGG 56
Query: 427 VFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 546
++ I FP DYP KPP + T + N +CL I
Sbjct: 57 IYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI 94
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1
Query: 400 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR 552
P + Y+GG F I P +Y PP V T+++HPNIN +GSICL ILR
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILR 117
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 456
S A++R+ ++ L +DP A P+ +++ W + G D+P+ GG ++ + F
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKE 76
Query: 457 DYPFKPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTIS 582
++P+ PP + T + +N +CL D W+P T+S
Sbjct: 77 NFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVS 119
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 361 GEDLF-HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC 537
G D++ W T+ GP SP++GG + ++++F +P PP F T ++HPN++ GSI
Sbjct: 64 GADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIY 122
Query: 538 LDILRAQ-WS 564
L +L + WS
Sbjct: 123 LKMLEQEHWS 132
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +1
Query: 289 LKRINRELQDLGRDPPAQCSAGPHGE---DLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 459
L RI +E+ DL ++ E D+F ++ G + Y+ +F LT+ +
Sbjct: 15 LSRIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIGDGVL---YKNMIFTLTLDVNVE 71
Query: 460 YPFKPPKVAFTTRIYHPNINS-NGSICLD-ILRAQWSPALTISXSVALNLL 606
YPFKPP + F +YHPN++ +C +L+ W P T+ V LNL+
Sbjct: 72 YPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTME-DVLLNLI 121
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 370 LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI 534
L W A+I+GP +PY+ ++ L I +YP +PP V FTT+++ +N SNG I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVI 93
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 370 LFHWQATIMGPVDSPYQGGVFFLTIHF-PTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 546
LFH I GPV S Y+GG FF I+ P P+V F T I+HPN+ G+ D+
Sbjct: 63 LFH--VIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN--WDM 118
Query: 547 LRAQW 561
QW
Sbjct: 119 RGIQW 123
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 391 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 543
I GP D+PY+ GVF + + FP +YP P++ F T I++ + S G + ++
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQVHIE 86
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = +1
Query: 307 ELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP--PK 480
E ++ R P P + F W I + GG+F IH P ++P P+
Sbjct: 27 EFVEVCRAPIDGIFVSPSANNKFLWFGVIFVR-KGIFGGGIFRFNIHIPLEFPDASDLPR 85
Query: 481 VAF-TTRIYHPNI-NSNGSICLD 543
V F + ++HP I + +CL+
Sbjct: 86 VIFEQSNLFHPLICTKSKELCLN 108
>Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical
protein C04F12.8 protein.
Length = 272
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 484 AFTTRIYHPNINSNGSICLDILRAQWSPALTISXSVALNLLTSMRS 621
AF+ Y P+++S S+ LR +SP+ + S+AL S+ S
Sbjct: 200 AFSASTYRPSVSSASSLATSSLRRAYSPSSLPASSLALTTSYSLFS 245
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 471 FERVVCREMYGKEENSSLIRTVNWA--HNCGLPMEQIF 364
FER+ C E + +N+ T W HNC +P+EQ+F
Sbjct: 185 FERLACLEQW---KNAKTFETP-WVLVHNCQIPIEQLF 218
>AL032639-9|CAA21633.1| 303|Caenorhabditis elegans Hypothetical
protein Y38F1A.8 protein.
Length = 303
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 277 YFMLSYTDFQLDNETVSQGPLIRDCKMAPCLNAKVPPKSFYVVIVKSQQ 131
YF+++YT + E VS +CK P +N +PP S+ + I + Q+
Sbjct: 59 YFVVAYT-YLFQFEKVSN---FTECKECPNMNITLPPVSYSIGIWQPQK 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,170,360
Number of Sequences: 27780
Number of extensions: 340292
Number of successful extensions: 853
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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