Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a14
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   2.3  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   2.3  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.3  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   5.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.3  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 673 YCDKRFKLLHLINDEFKPHSCNRLRT 596
           YC + FK  H  +    P +  RLRT
Sbjct: 68  YCTQDFKKKHKADISGNPRALRRLRT 93


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 673 YCDKRFKLLHLINDEFKPHSCNRLRT 596
           YC + FK  H  +    P +  RLRT
Sbjct: 68  YCTQDFKKKHKADISGNPRALRRLRT 93


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 500 CEHNLYFYIGCSDIGYV 450
           C H LY ++G  D G V
Sbjct: 50  CTHLLYAFVGLRDDGVV 66


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = -3

Query: 679 CRYCDKRFKLLHLINDEFKPHSCNR 605
           C  CD+RF     +    + HS  R
Sbjct: 52  CPVCDRRFSQSSSVTTHMRTHSGER 76


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = -3

Query: 679 CRYCDKRFKLLHLINDEFKPHSCNR 605
           C  CD+RF     +    + HS  R
Sbjct: 308 CPVCDRRFSQSSSVTTHMRTHSGER 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,029
Number of Sequences: 336
Number of extensions: 3310
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)