Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a14
         (681 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0177 + 21365314-21366100,21367451-21367578,21367715-213678...    29   2.6  
08_02_0239 - 14680013-14680291,14680560-14680649,14680654-146810...    29   2.6  
12_01_0609 - 5024933-5025150,5025238-5025375,5025770-5025812           29   4.5  
01_01_1015 + 8029884-8030676,8030755-8030771                           28   7.9  

>09_06_0177 +
           21365314-21366100,21367451-21367578,21367715-21367870,
           21368006-21368196,21369392-21369434,21369537-21369627,
           21369859-21369935,21370278-21370366,21370474-21370657,
           21370885-21371138,21371465-21371567,21371646-21371977,
           21372060-21372504
          Length = 959

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 679 CRYCDKRFKLLHLINDEFKPHSCNRLRTTKIK 584
           C YC ++         E  P  C+RL+T KIK
Sbjct: 360 CEYCKEKAPPFSYSYGEILPFKCHRLKTVKIK 391


>08_02_0239 -
           14680013-14680291,14680560-14680649,14680654-14681047,
           14682052-14682137,14683327-14683465,14683470-14683585
          Length = 367

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 457 VMSTIALAVIRPVPPNKFSQHYEMG 383
           V+  +A  +I+ V PN F+QHY +G
Sbjct: 166 VVHAMAADIIKCVDPNNFAQHYRLG 190


>12_01_0609 - 5024933-5025150,5025238-5025375,5025770-5025812
          Length = 132

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 337 KNYRNIHRIANLVTMIPLILTVLVRIFLLEQKH 239
           KN+  I  +A +V  + +I+ VL  +FLL +KH
Sbjct: 19  KNHTTILIVAIVVPSVVVIIVVLAPLFLLRKKH 51


>01_01_1015 + 8029884-8030676,8030755-8030771
          Length = 269

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 418 GQGVSLRERLWT*PISLHPI*KYRLCSQCILLYNNIHLCSKTQD 549
           G G S    +W   +  H    YRLCS C+LL +    CS   D
Sbjct: 21  GVGCSSSHNVWAHRVR-HNGGVYRLCSSCVLLGHRDAFCSVCLD 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,509,618
Number of Sequences: 37544
Number of extensions: 279985
Number of successful extensions: 603
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)