Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a14
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026208-3|AAB71267.3|  903|Caenorhabditis elegans Hypothetical ...    31   0.58 
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr...    28   5.4  

>AF026208-3|AAB71267.3|  903|Caenorhabditis elegans Hypothetical
           protein F52D1.1 protein.
          Length = 903

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 494 VHNVYCYITIYTCV--LKLRTSNMADAIVTTVLYFSGSQSVAAVW 622
           VHNVY +    +    LK R++N     V +  +F+GSQ  AAVW
Sbjct: 523 VHNVYGFHQHSSTFEGLKARSNNEVRPFVLSRSFFAGSQRTAAVW 567


>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical
           protein W09D10.2 protein.
          Length = 1335

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -3

Query: 418 PPNKFSQ---HYEMGALTNTKSMFLQSIIKKNYRNIHRIANLVTMIPLILTVLVRIF 257
           PP ++ Q    Y    ++ TK   L  I K  +  +HR ANL  +  +IL +++  F
Sbjct: 16  PPPRYEQPNRKYCGNRISTTKYSVLTFIPKNLFEQLHRAANLYFIFIVILNMIIGAF 72


>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
           protein T14E8.1c protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +2

Query: 425 AYHCESDCGHNLYRYTLYKNIGYVHNVYCYITIYTCVLKLRTSNMADAIVTTVLYFSGSQ 604
           AYH +S   HN +  T ++  G+V+ V     I+   + L   +     VT V+ F  + 
Sbjct: 196 AYHADSSFIHNNHALTGFEREGFVYFVMTASQIFEPEVFLHDQSNNKVTVTKVIRFCATD 255

Query: 605 SVA 613
             A
Sbjct: 256 QTA 258


>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
           protein T14E8.1b protein.
          Length = 1030

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +2

Query: 425 AYHCESDCGHNLYRYTLYKNIGYVHNVYCYITIYTCVLKLRTSNMADAIVTTVLYFSGSQ 604
           AYH +S   HN +  T ++  G+V+ V     I+   + L   +     VT V+ F  + 
Sbjct: 196 AYHADSSFIHNNHALTGFEREGFVYFVMTASQIFEPEVFLHDQSNNKVTVTKVIRFCATD 255

Query: 605 SVA 613
             A
Sbjct: 256 QTA 258


>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
           protein T14E8.1a protein.
          Length = 1086

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +2

Query: 425 AYHCESDCGHNLYRYTLYKNIGYVHNVYCYITIYTCVLKLRTSNMADAIVTTVLYFSGSQ 604
           AYH +S   HN +  T ++  G+V+ V     I+   + L   +     VT V+ F  + 
Sbjct: 196 AYHADSSFIHNNHALTGFEREGFVYFVMTASQIFEPEVFLHDQSNNKVTVTKVIRFCATD 255

Query: 605 SVA 613
             A
Sbjct: 256 QTA 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,441,279
Number of Sequences: 27780
Number of extensions: 287184
Number of successful extensions: 640
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)