Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a08
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...   281   2e-76
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...   184   6e-47
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...   132   3e-31
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...   132   3e-31
AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock pr...   132   3e-31
Z68227-2|CAA92509.1|  322|Caenorhabditis elegans Hypothetical pr...    33   0.17 
U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to tran...    31   0.93 
U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to tran...    31   0.93 
Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical pr...    28   1.2  
U39999-12|AAA81110.1|  577|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z70270-4|CAA94225.1|  615|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AL032626-28|CAO82072.1|  337|Caenorhabditis elegans Hypothetical...    28   6.5  
AL032626-8|CAA21528.1|  335|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z81139-3|CAB03482.1|  520|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z74033-3|CAA98477.1|  407|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score =  281 bits (690), Expect = 2e-76
 Identities = 135/157 (85%), Positives = 149/157 (94%)
 Frame = +1

Query: 154 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELY 333
           ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKIRY++LT+PS+LD+GKEL+
Sbjct: 6   ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELF 65

Query: 334 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 513
           IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG
Sbjct: 66  IKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 125

Query: 514 FYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRP 624
           FYS++LVAD+V V SK+NDD+ Y WESSAGGSF VRP
Sbjct: 126 FYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVRP 162


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score =  184 bits (447), Expect = 6e-47
 Identities = 92/163 (56%), Positives = 120/163 (73%), Gaps = 5/163 (3%)
 Frame = +1

Query: 145 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK 324
           ++ E   FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTDP +L   +
Sbjct: 59  SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETE 118

Query: 325 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS----- 489
           E+ +KI  ++    L I DTG+GMT+ DL+NNLGTIA+SGT  F+  L   A  S     
Sbjct: 119 EMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSSDQQQD 178

Query: 490 MIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV 618
           +IGQFGVGFY+++LVADRV V +K+NDD+QY+WES +  SFT+
Sbjct: 179 LIGQFGVGFYAAFLVADRVVVTTKNNDDDQYIWESDS-ASFTI 220


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score =  132 bits (318), Expect = 3e-31
 Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
 Frame = +1

Query: 118 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 297
           +P +     +E +   FQAE   LM ++  + YS+ E+F+RELISN+SDAL+K RY  L 
Sbjct: 31  VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89

Query: 298 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 477
               +  G    I+I  NK++ T+T  DTGIGM + DLV  LGTIAKSG+K F+E  +  
Sbjct: 90  -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147

Query: 478 ADISMIGQFGVGFYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPXSG 633
           A+ ++IGQFGVGFYS+++VAD V V ++    +D +   W  +   S+ +   SG
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG 201


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score =  132 bits (318), Expect = 3e-31
 Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
 Frame = +1

Query: 118 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 297
           +P +     +E +   FQAE   LM ++  + YS+ E+F+RELISN+SDAL+K RY  L 
Sbjct: 31  VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89

Query: 298 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 477
               +  G    I+I  NK++ T+T  DTGIGM + DLV  LGTIAKSG+K F+E  +  
Sbjct: 90  -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147

Query: 478 ADISMIGQFGVGFYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPXSG 633
           A+ ++IGQFGVGFYS+++VAD V V ++    +D +   W  +   S+ +   SG
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG 201


>AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock
           protein 75 protein.
          Length = 222

 Score =  132 bits (318), Expect = 3e-31
 Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
 Frame = +1

Query: 118 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 297
           +P +     +E +   FQAE   LM ++  + YS+ E+F+RELISN+SDAL+K RY  L 
Sbjct: 31  VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89

Query: 298 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 477
               +  G    I+I  NK++ T+T  DTGIGM + DLV  LGTIAKSG+K F+E  +  
Sbjct: 90  -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147

Query: 478 ADISMIGQFGVGFYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPXSG 633
           A+ ++IGQFGVGFYS+++VAD V V ++    +D +   W  +   S+ +   SG
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG 201


>Z68227-2|CAA92509.1|  322|Caenorhabditis elegans Hypothetical
           protein F49C12.4 protein.
          Length = 322

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 19/64 (29%), Positives = 35/64 (54%)
 Frame = +1

Query: 202 INTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIID 381
           +N +  N ++F    ++ +S+  +   YESLT     +  +  +I I+PNK E  +T++ 
Sbjct: 75  LNPYRGNHDLFWSAFVNKTSECDNLKEYESLTIRPVANKDEVKFI-ILPNK-ETNITMVT 132

Query: 382 TGIG 393
            GIG
Sbjct: 133 LGIG 136


>U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform a
           protein.
          Length = 428

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = +3

Query: 333 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 494
           H DH     GHS+DH     +D G   G    NH      S   GS +   H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423


>U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform b
           protein.
          Length = 446

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = +3

Query: 333 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 494
           H DH     GHS+DH     +D G   G    NH      S   GS +   H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441


>Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical
           protein H13N06.5 protein.
          Length = 462

 Score = 28.3 bits (60), Expect(2) = 1.2
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +3

Query: 354 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 494
           + GH++DH + + +D G   +  G+  +      HG +     H H+
Sbjct: 77  DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123



 Score = 20.6 bits (41), Expect(2) = 1.2
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = +3

Query: 321 QRAVHQDHSQQERGHSYDH 377
           Q   HQ H     GH + H
Sbjct: 36  QNVHHQGHGHAHGGHGHAH 54


>U39999-12|AAA81110.1|  577|Caenorhabditis elegans Hypothetical
           protein F41G3.3 protein.
          Length = 577

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 348 QQERGHSYDHRYRYWYDQGRFGEQFGN 428
           +Q+  H YD RY   YD   + E +GN
Sbjct: 48  KQQEAHHYDDRYNNTYDNYDYEEDYGN 74


>Z70270-4|CAA94225.1|  615|Caenorhabditis elegans Hypothetical
           protein C53D6.6 protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 465 SLHESFSTRFRDGSQIVHQIGLGHTNTGIDDRKSALVL 352
           SLH  +  R R+  + V  +GLG  +   DDRK+  V+
Sbjct: 155 SLHFKYEQRLREELRNVEYVGLGCYSWNKDDRKNEQVV 192


>AL032626-28|CAO82072.1|  337|Caenorhabditis elegans Hypothetical
           protein Y37D8A.9b protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 235 LRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL- 411
           LR+++ +  D + +     +     +D   E YIK IP  NE   T+ D  I   +AD+ 
Sbjct: 134 LRKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIK 193

Query: 412 VNNLGTI 432
           + NL  I
Sbjct: 194 ITNLALI 200


>AL032626-8|CAA21528.1|  335|Caenorhabditis elegans Hypothetical
           protein Y37D8A.9a protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 235 LRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL- 411
           LR+++ +  D + +     +     +D   E YIK IP  NE   T+ D  I   +AD+ 
Sbjct: 134 LRKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIK 193

Query: 412 VNNLGTI 432
           + NL  I
Sbjct: 194 ITNLALI 200


>Z81139-3|CAB03482.1|  520|Caenorhabditis elegans Hypothetical
           protein W05H5.3 protein.
          Length = 520

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/67 (22%), Positives = 27/67 (40%)
 Frame = +1

Query: 385 GIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKH 564
           G+GM   D+ ++ GT   +G     +A      + M+G    GF         V   S  
Sbjct: 53  GVGMGANDIADSFGTSVGTGILTVTQAFILATVVEMMGSVASGFSGDGQQLQVVNTESYE 112

Query: 565 NDDEQYV 585
           ++ ++ V
Sbjct: 113 DNPDELV 119


>Z74033-3|CAA98477.1|  407|Caenorhabditis elegans Hypothetical
           protein F38B7.3 protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 339 DHSQQERGHSYDHRYRYWYDQGR-FGEQFGN 428
           D SQQ+  ++Y +  +  YDQG  +G  +GN
Sbjct: 334 DQSQQQSDNNYGNANQDSYDQGNDYGNDYGN 364


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,745,971
Number of Sequences: 27780
Number of extensions: 313629
Number of successful extensions: 903
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)