Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a05
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81057-5|CAB02917.2|  846|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z78541-1|CAB01740.1|  452|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    28   4.6  

>Z81057-5|CAB02917.2|  846|Caenorhabditis elegans Hypothetical
           protein F10D11.6 protein.
          Length = 846

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +2

Query: 359 RVVAKLYIPELKMKGNYKLSGQLL-MLPMNGEGQFTAKYGDIDATVTIILGREPRPNSVD 535
           R+V ++   +L + GN  L GQ++ +LP+   G           TV + + R PR   V 
Sbjct: 131 RIVLQVQNVDLGVTGN--LGGQIVVLLPIALSGIVQLNIHQATITVQLAIERGPRGPYVR 188

Query: 536 ALTCDQLDVNFHVGYASMQLEN 601
            L+CD       +GYA   +EN
Sbjct: 189 LLSCD-----MQIGYADAYIEN 205


>Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical
           protein F48C11.2 protein.
          Length = 708

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 173 IPKLATGLPEYGVPPSEPLIVPSISIQQSTGPITVTSSYSDV 298
           IP +A G  +Y V  SE +I+P  +IQ     ITV   +  V
Sbjct: 332 IPIVAPGKMDYDVEKSEAVILPPPAIQPEPVYITVPEKHESV 373


>Z78541-1|CAB01740.1|  452|Caenorhabditis elegans Hypothetical
           protein F19D8.1 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 91  FYKLWWFYMSERRKGVGEMSERRFERVYP*ISHRTAGIW 207
           F  +++ YMS    G+G++  RR + + P + + T G+W
Sbjct: 259 FDSVYFSYMSLTTIGLGDIVPRRMDFLLPTLIYITIGLW 297


>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = +2

Query: 122 REEKALGKCLKDALNEYIPKLATGLPEYGVPPSEPLIVPSISIQQSTGPITVTSSYSD 295
           + E+  G+   + + E IP   T     G PP+      S S Q STG  T TSSY +
Sbjct: 222 KPEEIEGEDEYEDVEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQN 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,253,163
Number of Sequences: 27780
Number of extensions: 312820
Number of successful extensions: 1016
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)