Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12a05
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 79 5e-17
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 25 0.45
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 25 0.78
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 25 0.78
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.78
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 24 1.4
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 4.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.3
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 78.6 bits (185), Expect = 5e-17
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Frame = +2
Query: 113 ICPRE--EKALGKCLKDALNEYIPKLATGLPEYGVPPSEPLIVPSISIQQSTGPITVTSS 286
IC R +K +C+ +A+ + + LA GL + + P EPL V S+ I +S G +T+
Sbjct: 30 ICDRSLPQKEYNQCIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQE 89
Query: 287 YSDVTVRGPSK-MRIKDVQVNSVHRRVVAKLYIPELKMKGNYKLSGQLLMLPMNGEGQFT 463
Y ++ + G +K + IK+ ++ + ++ Y P++ +YK+ G++L+LP+ G G+
Sbjct: 90 YKNIKLYGLTKNLEIKNYNIDWDKCILSSESYNPQVDFVADYKIEGKVLLLPVRGAGKSN 149
Query: 464 AKYGDIDATVTIILGREPRPNSVDALTCDQLDVNFHVGYASMQLENLFGGD 616
D+ + I + + N L + V F+ ++ ENLF G+
Sbjct: 150 ITMYDLKSHNDIYCEKYEK-NGETYLRIKKHAVKFNPAKVKLRFENLFDGN 199
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 25.4 bits (53), Expect = 0.45
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 174 IYSFKASFRHFPNAFSSLGHIKPPKFI 94
IYS+KA FPN ++ L IK +I
Sbjct: 27 IYSWKALEFAFPNGYAKLAAIKSGSYI 53
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 113 ICPREEKALGKCLKDALNEYIPK 181
+CP+EE + D L Y+P+
Sbjct: 265 LCPQEEACFRLLMNDILRPYVPE 287
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 113 ICPREEKALGKCLKDALNEYIPK 181
+CP+EE + D L Y+P+
Sbjct: 180 LCPQEEACFRLLMNDILRPYVPE 202
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 113 ICPREEKALGKCLKDALNEYIPK 181
+CP+EE + D L Y+P+
Sbjct: 499 LCPQEEACFRLLMNDILRPYVPE 521
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 295 IRVRRSNRDGTS*LLDRNRWNDKRLRWGNP 206
I + N+ T+ + RWND +L+W NP
Sbjct: 71 IEMNLKNQVMTTNVWVEQRWNDYKLKW-NP 99
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 295 IRVRRSNRDGTS*LLDRNRWNDKRLRWGNP 206
I V N+ T+ + WND +L+W NP
Sbjct: 58 IDVNLKNQIMTTNVWVEQEWNDYKLKW-NP 86
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 337 DILNSHLRGPSDRNIRVRRSNRDGTS*LLDRNRWNDKRLRW 215
D+L ++ + I V N+ T+ L W D +LRW
Sbjct: 52 DVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRW 92
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 337 DILNSHLRGPSDRNIRVRRSNRDGTS*LLDRNRWNDKRLRW 215
D+L ++ + I V N+ T+ L W D +LRW
Sbjct: 52 DVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRW 92
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 494 TIILGREPRPNSVDALTCDQLDVNF 568
TI R+P +S D CD + + F
Sbjct: 309 TITHLRDPDHHSTDIQNCDSVKIKF 333
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,938
Number of Sequences: 438
Number of extensions: 3894
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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