Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a04
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   8.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   8.0  

>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 429 LIQVPVTIHLASAGPS 382
           +IQ+PV I L   GP+
Sbjct: 17  IIQIPVIIQLPFCGPN 32


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 615 HFTFSFNLNFCFIELIKLARSASA 544
           HF + F   FC I+      SA+A
Sbjct: 117 HFPYVFGEAFCIIQSFAAETSANA 140


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 236 IDNHHQVFLNYHHYYGPNEIFLHHQH 159
           +DNHH    N+H   G +  FL  +H
Sbjct: 276 LDNHHVHHANHHAILG-HSGFLCERH 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,169
Number of Sequences: 438
Number of extensions: 4163
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)