Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11p23
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    25   2.9  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    25   2.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.9  

>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 260 KVWLLSML*MLFIDVVSNEE 201
           KVWLL+ + + F+D V ++E
Sbjct: 3   KVWLLASVVLAFLDFVKSQE 22


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 260 KVWLLSML*MLFIDVVSNEE 201
           KVWLL+ + + F+D V ++E
Sbjct: 3   KVWLLASVVLAFLDFVKSQE 22


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +1

Query: 145 IELDEESYIQNETSLINIDSSLETTSINNIYSIDNSHTLEKKGNKKKESTST 300
           IE   ++YI        I + L+  +   I S+DN+      G+K+ ES  T
Sbjct: 696 IEAKNDAYIPKGGDKKIISTKLQWNAKPKIGSLDNASHKPGGGDKRIESIKT 747


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,876
Number of Sequences: 2352
Number of extensions: 11588
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)