Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p21
(727 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0011 + 90859-91169,92075-92622,92701-92803,92899-92998,934... 81 7e-16
11_01_0011 + 95001-95311,96217-96764,96843-96945,97041-97140,975... 81 7e-16
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 46 4e-05
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 37 0.014
04_03_0566 + 17209455-17209565,17210159-17210203,17211456-172115... 37 0.019
03_01_0012 - 101584-101898,102274-102531,102932-103474 35 0.057
05_03_0457 + 14274533-14274879,14275575-14275605 35 0.076
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 34 0.100
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 33 0.23
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 31 0.70
04_03_0629 + 18179065-18179148,18180146-18180287,18180987-181810... 31 0.70
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 31 0.93
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 31 0.93
06_01_0201 - 1546455-1546652,1547124-1547201,1548217-1548402,154... 31 1.2
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 30 1.6
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940... 30 2.2
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 29 3.8
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 29 3.8
03_04_0091 + 17241555-17241602,17241685-17241822,17241901-172421... 29 3.8
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 28 6.6
07_03_0343 + 16975163-16975282,16975483-16975486,16975528-16975652 28 6.6
>12_01_0011 +
90859-91169,92075-92622,92701-92803,92899-92998,
93453-93529,93608-93686,94108-94226,94330-94423
Length = 476
Score = 81.4 bits (192), Expect = 7e-16
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = +1
Query: 508 IDKPSLALNCVGGKSSLEMLRHLQHSGCMVTYGGMSRDPVSIPTSAFIFKNLSFFGFWMT 687
+ +P+L LNCVGG ++ +L+ L+ G MVTYGGMS+ PV++ TS+FIFK+LS GFW+
Sbjct: 357 LPEPALGLNCVGGNAASVILKFLRQGGTMVTYGGMSKKPVTVSTSSFIFKDLSLRGFWLQ 416
Query: 688 AW--NEKAD 708
W ++KA+
Sbjct: 417 KWMSSDKAE 425
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLP-CVP 468
++Y + G P V++ E +G ++V VRMLAAP+NP+D+N ++G YPV+ LP V
Sbjct: 146 VLYDQHGPPDKVLRVAELPAAKIGERDVCVRMLAAPINPSDLNRVEGVYPVRPPLPAAVA 205
Query: 469 GNEGVGIV 492
G EGVG V
Sbjct: 206 GYEGVGQV 213
>11_01_0011 +
95001-95311,96217-96764,96843-96945,97041-97140,
97595-97671,97750-97828,98250-98368,98472-98565
Length = 476
Score = 81.4 bits (192), Expect = 7e-16
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = +1
Query: 508 IDKPSLALNCVGGKSSLEMLRHLQHSGCMVTYGGMSRDPVSIPTSAFIFKNLSFFGFWMT 687
+ +P+L LNCVGG ++ +L+ L+ G MVTYGGMS+ PV++ TS+FIFK+LS GFW+
Sbjct: 357 LPEPALGLNCVGGNAASVILKFLRQGGTMVTYGGMSKKPVTVSTSSFIFKDLSLRGFWLQ 416
Query: 688 AW--NEKAD 708
W ++KA+
Sbjct: 417 KWMSSDKAE 425
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLP-CVP 468
++Y + G P V++ E +G ++V VRMLAAP+NP+D+N ++G YPV+ LP V
Sbjct: 146 VLYDQHGPPDKVLRVAELPAAEIGERDVCVRMLAAPINPSDLNRVEGVYPVRPPLPAAVA 205
Query: 469 GNEGVGIV 492
G EGVG V
Sbjct: 206 GYEGVGQV 213
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 45.6 bits (103), Expect = 4e-05
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 298 YSEFGDPLHVVKYRECQ-VPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVN-LPCVPG 471
Y ++GD V+K + VP + +VLVR+ AA +NP D GK+ + LP VPG
Sbjct: 87 YDDYGDG-SVLKLNDAAAVPDIADDQVLVRVAAAALNPVDAKRRAGKFKATDSPLPTVPG 145
Query: 472 NEGVGIVEEEKKIDKPSLALNCVGGKSSLEMLRHLQHSGCMVTY 603
+ G+V + + K + V G S + L + SG + Y
Sbjct: 146 YDVAGVVVKAGRKVKGLKEGDEVYGNISEKALEGPKQSGSLAEY 189
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +1
Query: 349 VPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIV 492
+PP G EVLV + AA VN AD QG+YP PG E G +
Sbjct: 24 LPPPGEGEVLVGVSAAGVNRADTVQRQGRYPAPPGASPYPGLECSGTI 71
>04_03_0566 +
17209455-17209565,17210159-17210203,17211456-17211569,
17211943-17212081,17212324-17212415,17213245-17213517
Length = 257
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 298 YSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKY-PVKVNLPCVPGN 474
Y+ +G +K+ E VP + EVL+++ AA VNP D + +G P P +P
Sbjct: 79 YTGYGGGAGALKHVEIPVPSVKKHEVLIKVEAASVNPIDWSIQKGMLRPFLPKFPFIPVT 138
Query: 475 EGVGIVEE 498
+ G + E
Sbjct: 139 DVAGEIVE 146
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 35.1 bits (77), Expect = 0.057
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 304 EFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGV 483
E G P V+++ + +V E+ ++ A VN D+ QG Y LP VPG E V
Sbjct: 54 ELGGP-EVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGVYSAP--LPFVPGREAV 110
Query: 484 GIV 492
G+V
Sbjct: 111 GVV 113
>05_03_0457 + 14274533-14274879,14275575-14275605
Length = 125
Score = 34.7 bits (76), Expect = 0.076
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 352 PPLGSQ-EVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
P L S V VR+ A +N A +QGKY + LP VPG++ G V+
Sbjct: 33 PALASPTSVRVRVAATSLNFATYLQVQGKYQERPALPFVPGSDYAGFVD 81
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 34.3 bits (75), Expect = 0.100
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 361 GSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVEE 498
G ++V+V++L + +D++TI+ ++ P VPG+E VG+V E
Sbjct: 31 GDEDVVVKILFCGICHSDLSTIKNEWG-NAKYPVVPGHEIVGVVAE 75
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +1
Query: 340 ECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
+ QV P + EV V++L + D T GK P + PC+ G+E GIVE
Sbjct: 28 DVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGL-FPCILGHEAAGIVE 78
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 322 HVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVK--VNLPCVPGNEGVGIVE 495
+ +K ++PP+G +V VRM A + +D++ ++ V P V G+E G++E
Sbjct: 32 NTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMVIGHECAGVIE 91
Query: 496 E 498
E
Sbjct: 92 E 92
>04_03_0629 +
18179065-18179148,18180146-18180287,18180987-18181078,
18181272-18181964
Length = 336
Score = 31.5 bits (68), Expect = 0.70
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 298 YSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQG--KYPVKVNLPCVPG 471
Y G +K+ E VP EVL+++ AA +NP D +G + + LP +P
Sbjct: 17 YDASGGGAAGLKHVEVPVPSAKKNEVLLKLEAATINPVDWKIQKGMLRPLLPRRLPFIPV 76
Query: 472 NEGVGIV 492
+ G+V
Sbjct: 77 TDVAGVV 83
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 316 PLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
P + E +V P EV +++L + D++ +G+ ++ P + G+E G+VE
Sbjct: 35 PGEALVMEEVEVAPPARMEVRLKVLFTSICHTDLSAWKGENELQRKFPRILGHEAAGVVE 94
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 361 GSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVEEEKK 507
G +V++++L + +D+++I+ ++ P VPG+E G+V E K
Sbjct: 29 GDDDVVIKILYCGICHSDLHSIKNEWK-NATYPLVPGHEIAGVVTEAGK 76
>06_01_0201 -
1546455-1546652,1547124-1547201,1548217-1548402,
1548909-1548919,1549256-1549568
Length = 261
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 148 DYSL*KINSKLDLLGFFNRLSTATSNLVLLCNPHNVLIPDVFALFLNN 5
D+S + LLGF ++AT + LL H+ IPD+ L +N+
Sbjct: 63 DFSFLRARGLRSLLGFLRSTASATDDSQLLLFRHSQSIPDLQVLLVNS 110
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 298 YSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPAD 414
Y +G +K+ E +P EVL++M AA +NP D
Sbjct: 19 YDGYGGGAEGLKHVEVPIPSPKKGEVLIKMEAASINPID 57
>01_06_0737 +
31592562-31592786,31593314-31593541,31593981-31594054,
31594595-31594754,31595979-31596098,31596185-31596293,
31597447-31597628
Length = 365
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRE-CQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVP 468
+V FG P V++ R+ VP L +VLVR A +NP D+ G Y + P +P
Sbjct: 33 VVVPRFGGP-EVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSG-YGRSIFEPVLP 90
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 361 GSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVEEEKK 507
G +V +++L + +D++ I+ ++ + P VPG+E G+V E K
Sbjct: 39 GDDDVAIKILFCGICHSDLHCIKNEWKHSI-YPLVPGHEIAGVVTEVGK 86
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +1
Query: 355 PLGSQEVLVRMLAAPVNPADINTIQGKY------PVKVNLPCVPGNEGVGIV 492
P+ LV+++ A VN +D+N G+Y LP G E VGIV
Sbjct: 314 PVEPHNALVKIIYAGVNASDVNFSAGRYFSGGAKETAARLPLDAGFEAVGIV 365
>03_04_0091 +
17241555-17241602,17241685-17241822,17241901-17242198,
17242281-17242513,17242632-17242827,17242911-17243032,
17243100-17243165,17243373-17243436,17243851-17244176
Length = 496
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +1
Query: 316 PLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
P HVVK E P V + N A+ NT + V + +P N V VE
Sbjct: 266 PKHVVKTVEASEKPSVKSSQTVEITPNDNNDAENNTSNDEQGYSVFVKSLPHNVTVQTVE 325
Query: 496 EEKK 507
EE K
Sbjct: 326 EEFK 329
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = +1
Query: 397 PVNPADINTIQGKYPVKVNLPCVPGNEGVGIVEEEKKIDKPSLALNCVGGKSSLEMLRHL 576
P +++ Y V+V + G V EE ++ +C G + L L L
Sbjct: 385 PYRVSELEKFSADYSVRVVFKEDAAGKVEGTVNEETAHEREKSGPSCFGRDTDLSWLHSL 444
Query: 577 QHSGCMVTYGGMS 615
G +V+ GMS
Sbjct: 445 TRLGGVVSVWGMS 457
>07_03_0343 + 16975163-16975282,16975483-16975486,16975528-16975652
Length = 82
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -3
Query: 260 ACPGIKTS-ACICQYSFNI 207
A PG K S +C+CQYSF I
Sbjct: 31 AAPGRKVSGSCVCQYSFRI 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,424,337
Number of Sequences: 37544
Number of extensions: 409024
Number of successful extensions: 930
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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