Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p19
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 278 1e-73
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 276 3e-73
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 272 7e-72
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 194 2e-48
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 191 2e-47
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 190 2e-47
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 163 4e-39
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 158 1e-37
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 155 1e-36
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 145 1e-33
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 144 2e-33
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 123 8e-30
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 111 2e-23
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 109 5e-23
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 62 1e-11
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 67 4e-10
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 61 3e-08
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 60 7e-08
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 59 1e-07
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 58 3e-07
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 56 1e-06
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 53 6e-06
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 53 7e-06
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 52 2e-05
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 52 2e-05
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 50 4e-05
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 49 1e-04
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 48 2e-04
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 46 0.001
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 44 0.003
UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyc... 43 0.008
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 43 0.008
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 42 0.014
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 40 0.056
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 39 0.13
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 38 0.23
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 34 2.8
UniRef50_UPI0000DAF6F6 Cluster: glucosamine fructose-6-phosphate... 33 4.9
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 33 8.6
UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A7EB45 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 8.6
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 278 bits (681), Expect = 1e-73
Identities = 132/192 (68%), Positives = 152/192 (79%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LGDEWKGYV R+ GGNDKQGFPMKQG++TN RVRLL+SKGHSCYRPRR GERKRKSVRGC
Sbjct: 41 LGDEWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGC 100
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 364
IVD+ LSVL+LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R
Sbjct: 101 IVDSQLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRR 160
Query: 365 VLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQR 544
LP KEGK K + KAPKIQRLVTPVVLQ A+YAKLLA+R
Sbjct: 161 PLPEKEGK---KAKSKAPKIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLLAKR 217
Query: 545 KKESKVRRQEEI 580
KE+K +R E++
Sbjct: 218 AKEAKEKRHEQL 229
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 276 bits (677), Expect = 3e-73
Identities = 139/192 (72%), Positives = 156/192 (81%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LG+EWKGYV+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGC
Sbjct: 41 LGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGC 100
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 364
IVDANLSVL LVIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++
Sbjct: 101 IVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRK 160
Query: 365 VLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQR 544
L KEGK KPR KAPKIQRLVTP VLQ AEYAKLLA+R
Sbjct: 161 PL-NKEGK---KPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKR 216
Query: 545 KKESKVRRQEEI 580
KE+K +RQE+I
Sbjct: 217 MKEAKEKRQEQI 228
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 272 bits (666), Expect = 7e-72
Identities = 129/192 (67%), Positives = 152/192 (79%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LGDEWKGYV ++AGGNDKQGFPMKQGVLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGC
Sbjct: 41 LGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGC 100
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 364
IVD NLS LAL++V+KG ++IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR
Sbjct: 101 IVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKR 160
Query: 365 VLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQR 544
LP K+GK KPR KAPKIQRL+TPVVLQ +EAEY K+L R
Sbjct: 161 PLPEKDGK---KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLR 217
Query: 545 KKESKVRRQEEI 580
+++ ++RR+ +
Sbjct: 218 RRQERIRRRSRL 229
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 194 bits (473), Expect = 2e-48
Identities = 100/191 (52%), Positives = 123/191 (64%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
+G+E+ GYV R+ GGNDKQGFPM QGVLTN+RVRLL KG CYRPR+ GE++RKSVRGC
Sbjct: 82 IGEEFLGYVFRITGGNDKQGFPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGC 141
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 364
IV +LS L L +V+KG EIPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+ R
Sbjct: 142 IVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGR 201
Query: 365 VLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQR 544
+ +N K R PKIQRLVT L EY K+L +
Sbjct: 202 AI-----SKNGKNRFIKPKIQRLVTEKRLLRKRTLIAKKEKRRLEKKKVIKEYKKVLNKY 256
Query: 545 KKESKVRRQEE 577
+ E + E+
Sbjct: 257 RNELLTKTDED 267
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 191 bits (465), Expect = 2e-47
Identities = 96/186 (51%), Positives = 125/186 (67%), Gaps = 3/186 (1%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LGDE+KGYV ++AGGNDK GFPMKQGV+ RVRLL+S+GHSC+ RR G RKRKSVRGC
Sbjct: 41 LGDEFKGYVFKIAGGNDKDGFPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGC 100
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYV 355
IV ++ VLAL IV+KG EI GLT +PR+LGPKRA+ I+KLF L KEDD +++ V
Sbjct: 101 IVGPDMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSV 160
Query: 356 VKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLL 535
++R +GK+ R K PKIQRL+TP + +++ EY K L
Sbjct: 161 IRRTFKTAKGKD----RTKCPKIQRLITPERILRKKVYKAEKTQRYVKTNAAKEEYEKFL 216
Query: 536 AQRKKE 553
++ KK+
Sbjct: 217 SEWKKQ 222
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 190 bits (464), Expect = 2e-47
Identities = 92/148 (62%), Positives = 114/148 (77%), Gaps = 3/148 (2%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LG+E+KGYVL++ GGNDKQGFPM+QGVL RVR+LM KGH YRPR+DGE KRKS+RGC
Sbjct: 41 LGEEYKGYVLKITGGNDKQGFPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGC 100
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYV 355
IV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D V++ +
Sbjct: 101 IVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNL 160
Query: 356 VKRVLPAKEGKENAKPRHKAPKIQRLVT 439
++R K+GK+ R KAPKIQRLVT
Sbjct: 161 IRRTWTTKDGKK----RQKAPKIQRLVT 184
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 163 bits (396), Expect = 4e-39
Identities = 87/188 (46%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Frame = +2
Query: 8 GDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRG 181
G E+KGY+ R+ GG+DK GFPM GVL +SRV LL+ +G + R GER+RK+VRG
Sbjct: 43 GSEFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRG 102
Query: 182 CIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVK 361
C++ ++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+YVV+
Sbjct: 103 CVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVR 162
Query: 362 RVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQ 541
R + K GK K R KAPKIQRL+TP V + EY +L+A
Sbjct: 163 RRV-VKSGK---KDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIAS 218
Query: 542 RKKESKVR 565
++ + R
Sbjct: 219 NRRALRQR 226
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 158 bits (384), Expect = 1e-37
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Frame = +2
Query: 2 QLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 181
+LG ++KGY+ R+ GG DKQGFPMKQGV+T R+RLL+ G SCYRPR+DGERKRK+VRG
Sbjct: 40 KLGGQFKGYLFRIGGGFDKQGFPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRG 99
Query: 182 CIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLS-KEDDVRRYVV 358
CI+ +S L V+++KG +EI GLT VPRR GPKRAS +R +F ++ + D + V+
Sbjct: 100 CIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVL 159
Query: 359 KRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLA 538
KR K GK +PK+QRL+T + +Y LL
Sbjct: 160 KR--EVKPGK------FTSPKVQRLITARRVARKNRMLKERKEKREATKKKAEQYQALLK 211
Query: 539 QRKKE 553
Q++K+
Sbjct: 212 QQQKQ 216
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 155 bits (375), Expect = 1e-36
Identities = 68/120 (56%), Positives = 95/120 (79%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LGDE+KGY+L++ GG DK GFPM GV TN+RVRLL+ + CY+P R+GER+RK+VRG
Sbjct: 40 LGDEFKGYILKITGGCDKDGFPMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGA 99
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 364
IV ++SVL ++V+KG EI G+T+ +P R GP+RAS RKLFNLS++DDV+++V++R
Sbjct: 100 IVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 145 bits (351), Expect = 1e-33
Identities = 82/192 (42%), Positives = 112/192 (58%), Gaps = 5/192 (2%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LG+E+ G R+ GGND QGFPM QGVL + R RLL+ +G CY RR+GERKRKS+RGC
Sbjct: 47 LGEEYAGCTFRITGGNDAQGFPMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGC 106
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL--SKEDDVRRYVV 358
IV +L L++V+V G + +PGLTD VP+RL PKRASKIR+LF L +K D + +V
Sbjct: 107 IVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRASKIRRLFGLPTTKVDPKDQMLV 166
Query: 359 KRV---LPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAK 529
+ L + +N + + K PK+QR+VT EY
Sbjct: 167 CELIKELGHEVTLKNGEKKLKYPKVQRVVTDEKYARKQRVIAEKKEIMRKSLQQLEEYKA 226
Query: 530 LLAQRKKESKVR 565
LL++ K+ +R
Sbjct: 227 LLSRMGKQHNIR 238
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 144 bits (348), Expect = 2e-33
Identities = 80/137 (58%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
Frame = +2
Query: 35 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLA 214
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 215 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKE-GKE 391
L +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D RV+ ++E G +
Sbjct: 116 LQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKAD--------RVISSEEHGPQ 167
Query: 392 N-AKPRHKAPKIQRLVT 439
K R KAPKIQRLVT
Sbjct: 168 RYGKKRQKAPKIQRLVT 184
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 123 bits (297), Expect(2) = 8e-30
Identities = 70/139 (50%), Positives = 88/139 (63%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR
Sbjct: 41 LGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKY 99
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 364
V+AN+S L LV+++K P RLGP R+S I K++ L +EDD
Sbjct: 100 TVEANVSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD-------E 142
Query: 365 VLPAKEGKENAKPRHKAPK 421
V+P K + + K R A K
Sbjct: 143 VIPVKLQRRHQKKRQNATK 161
Score = 29.9 bits (64), Expect(2) = 8e-30
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 515 AEYAKLLAQRKKESKVRR 568
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 111 bits (267), Expect = 2e-23
Identities = 59/144 (40%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LG+E++G ++ + GG+D QGFPM G LT RVR L+SKG + YR RR G R+RKSVRG
Sbjct: 26 LGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGS 85
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 364
IV + VL L+I+R G +EI GLT+ P++ K+RK+F + E+ ++
Sbjct: 86 IVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRN 145
Query: 365 VLPAK--EGKENAKPRHKAPKIQR 430
+L ++ + K+ K RH +++R
Sbjct: 146 ILKSECDDPKKIPKIRHNGKRMKR 169
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 109 bits (263), Expect = 5e-23
Identities = 62/152 (40%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVR 178
+G EW + + GG DKQGFPMK+G+L+ SRV++L+ KG + R + GER RKSVR
Sbjct: 41 IGKEWDKSIFIITGGQDKQGFPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVR 100
Query: 179 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 358
GCIV +SVL + ++ ++ +T+ N + L KR+S +RK+ L+K DD+R++ +
Sbjct: 101 GCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYI 159
Query: 359 KRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQ 454
K AK+ K KIQRL+TP+ +Q
Sbjct: 160 K---IAKDFKNKV-------KIQRLITPIKIQ 181
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 62.5 bits (145), Expect(2) = 1e-11
Identities = 43/108 (39%), Positives = 59/108 (54%)
Frame = +2
Query: 98 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 277
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 278 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 421
RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 29.9 bits (64), Expect(2) = 1e-11
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 515 AEYAKLLAQRKKESKVRR 568
AEY KLL +RKKESK R
Sbjct: 112 AEYVKLLVKRKKESKANR 129
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 66.9 bits (156), Expect = 4e-10
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 115
LG+EWKGY++R++GGNDKQGFPMKQ VLT+ R+ LL+
Sbjct: 41 LGEEWKGYMVRISGGNDKQGFPMKQDVLTHDRIHLLL 77
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Frame = +2
Query: 239 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLP-AKEGKENAK 400
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKE--K 137
Query: 401 PRHKAPKIQRL 433
+ + K QRL
Sbjct: 138 RQEQIAKRQRL 148
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +2
Query: 20 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDAN 199
KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G R+RK+VRG + +
Sbjct: 43 KGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKGLRRRKTVRGNTIADD 101
Query: 200 LSVLALVIVRKGAQEI 247
+S + + + +G Q +
Sbjct: 102 ISQINVKVSERGEQTL 117
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +2
Query: 26 YVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLS 205
Y L++ GG D+ GFPM+ + +R RLL+S G +RP+ G RKRK VRG ++ ++
Sbjct: 48 YELKITGGTDRDGFPMRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDIL 106
Query: 206 VLALVIVRKG 235
+ V+V+ G
Sbjct: 107 QINTVVVKHG 116
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Frame = -3
Query: 355 DITTYIIFFAKVEQLTDFGSTFGT*TAGYISISQSRNFLGTLAHNNKSQDREIGVNNTST 176
D+ +IFF + E+LT+ T T + I ++R+ L N++ Q + ++ +T
Sbjct: 95 DVLADVIFFGQSEELTNLARTLRTTETRHFGIGEARDVGVALLDNDQVQHGNVLGDDATT 154
Query: 175 ----N*FTFSLSIAARSVT*VAL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 11
+ FT + ++AA + AL H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 155 ARLASAFTLASAVAAEAAR--ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +2
Query: 32 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVL 211
L++ GG DK GFPM+ V RV++L+S+G +RPR GER++K+V G + N+ +
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQV 119
Query: 212 ALVIV 226
+ IV
Sbjct: 120 NMKIV 124
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +2
Query: 32 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 181
L + GG DK GFPM+ + RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 53.2 bits (122), Expect = 6e-06
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Frame = +2
Query: 65 FPMKQGVLTNSRVRLLMSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 241
F MKQ VL + RV LL++ HS Y+P R E S++ V +S+L +VI+ G +
Sbjct: 50 FSMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRK 108
Query: 242 EIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK--EGKENAKPRHKA 415
+IPG T +R PKR +I+ F++S +K VL K + K++ KPR K
Sbjct: 109 DIPGQT-----KRWAPKRWRRIQS-FSVS---------LKTVLSTKKPQNKDSKKPRPKT 153
Query: 416 PKIQ 427
K+Q
Sbjct: 154 HKVQ 157
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/80 (30%), Positives = 48/80 (60%)
Frame = +2
Query: 14 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 193
E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y + G R+RKS+RG +
Sbjct: 40 ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEKGLRRRKSLRGNTIS 98
Query: 194 ANLSVLALVIVRKGAQEIPG 253
+++++ +V G+ + G
Sbjct: 99 KDITLINTKVVEYGSAPLGG 118
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +2
Query: 23 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 202
GY L + GG+D GFPM + + R+L+S G + PR GER+RK+VRG + ++
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVRGNTITHDI 204
Query: 203 SVLALVIV 226
+ VIV
Sbjct: 205 VQINTVIV 212
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +2
Query: 32 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVL 211
L++ GG+D GFPM+ V+ ++ ++L+S G + P +GER+RK++RG + + +
Sbjct: 150 LKITGGSDNSGFPMRFDVIGAAKRKILLS-GPPGFYPNENGERRRKTIRGNTISQEIVQI 208
Query: 212 ALVIVR 229
+IVR
Sbjct: 209 NTIIVR 214
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +2
Query: 20 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDAN 199
KG L + GG+D+ GFPM+ + + R L+S G + PR GER+RK+VRG + +
Sbjct: 167 KGLQLEIRGGSDESGFPMRPDIPGPVKKRALLS-GPPGFWPREKGERRRKTVRGNTISED 225
Query: 200 LSVLALVIVRK 232
+ + IV++
Sbjct: 226 IVQINTKIVKQ 236
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = +2
Query: 23 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 202
GY + + GG+D G PM++ V + + +L+ +G + + P DGERKR +VRG V +
Sbjct: 47 GYTVEITGGSDDAGRPMREDVDGSDLMEVLL-EGGAGFNPDEDGERKRVTVRGKEVSEAV 105
Query: 203 SVLALVIVRKGAQEIPGL 256
+ L + I G + + L
Sbjct: 106 AQLNVAIDEHGEEPVAEL 123
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 23 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 190
G ++ GG D G PM GV + R ++L++ G + PR GER+RKSVRG ++
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVR 178
LG+++ + GG+DKQGF +K+ + T R+++ + KG R +R K+++VR
Sbjct: 40 LGEDFSRNEFLINGGHDKQGFLLKKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVR 99
Query: 179 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLF 319
G I+ + +S + LV + +E + ++L KR +K++ LF
Sbjct: 100 GGILSSEISSINLVKLPNNVKE--SSVFPSKEQKLA-KRVTKLKTLF 143
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +2
Query: 23 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 202
GY +++ GG D GF MK + R R+L + G Y P+ G+R+RK +RG + ++
Sbjct: 47 GYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLPGQRRRKMMRGKEIAPDI 105
Query: 203 SVLALVIVRKGAQEIPGL 256
+ +V G++ I L
Sbjct: 106 VQVNAKVVEYGSKSIKAL 123
>UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyces
maris DSM 8797|Rep: Pseudouridine synthase -
Planctomyces maris DSM 8797
Length = 352
Score = 42.7 bits (96), Expect = 0.008
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +2
Query: 56 KQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 235
++G K+GV S ++ L +G S + E + + +R + V+ LV +R G
Sbjct: 171 RKGVRFKEGVFRVSGLKYLKKQGKSAFLELTLHEGQNREIRRMMARIGHKVIQLVRIRFG 230
Query: 236 AQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKP-RHK 412
+ L G RRL K+R+L N D+R ++GK+NA P + +
Sbjct: 231 PLNLGKLKTGE-SRRLSDTELKKLRQLLNEKHSPDIRH---------RKGKKNAAPAKTR 280
Query: 413 APK 421
AP+
Sbjct: 281 APR 283
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/75 (32%), Positives = 44/75 (58%)
Frame = +2
Query: 23 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 202
GY +++ GG+ GF M+ + T + ++L+ K S YR ++G RKR + RG I+ +++
Sbjct: 47 GYKMKITGGSSVDGFAMRPDLQTQGKKQILV-KYTSGYR-GKNGIRKRITARGSIIGSDI 104
Query: 203 SVLALVIVRKGAQEI 247
+ + L I + G I
Sbjct: 105 TQINLKITQYGPTPI 119
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 41.9 bits (94), Expect = 0.014
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +2
Query: 23 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 178
GY + + GG+D+ G P ++ + R +LL+++G + P +GERKRK +R
Sbjct: 47 GYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVMEGERKRKMIR 97
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 39.9 bits (89), Expect = 0.056
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 20 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG-CIVDA 196
KG +R+ GG+ +G PM GV + + +++ G Y P + G +K+K VRG I D+
Sbjct: 51 KGAKIRITGGSGIEGAPMHPGVPGPVK-KYILADGPPGYWPPKKGMKKKKLVRGNTISDS 109
Query: 197 NLSVLALVIVRKGAQEIPGLTDG 265
+ + A+++ K P + G
Sbjct: 110 IVQINAVIVYPKDYTGPPAIPLG 132
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 32 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 181
+R+ GG+DK G PM+ V +R +L+S+G R G R RK VRG
Sbjct: 54 IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGGRTRKLVRG 102
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 37.9 bits (84), Expect = 0.23
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 32 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 202
L++ GG+DK G PM+ + +R +L+SKG + G+R RK +RG V +
Sbjct: 48 LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQRVRKLMRGNTVSEEI 103
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 22 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKG 123
G C RWR ++ + DE G + PC+ DV+G
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRG 50
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 34.3 bits (75), Expect = 2.8
Identities = 19/101 (18%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +2
Query: 68 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV-DANLSVLALVIVRKGAQE 244
P K+ ++T++R ++L+ +SCY PR G+ + ++ + + ++++ +++ K Q
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHRLYNIYSLLAKEFDVTICSIIEANKQYQN 464
Query: 245 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 367
+ + D + + P+ R + K+ Y V +
Sbjct: 465 L--VLDNGLKQICIPQSTEHARYQWEAEKKVGANLYDVAMI 503
>UniRef50_UPI0000DAF6F6 Cluster: glucosamine fructose-6-phosphate
aminotransferase (isomerizing); n=1; Campylobacter
concisus 13826|Rep: glucosamine fructose-6-phosphate
aminotransferase (isomerizing) - Campylobacter concisus
13826
Length = 610
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 657 NTVDHFCGALWLELLESRIEADRLRLISSWRRTLDSFFLCASNLAYSASED 505
NT+ CGA+WL L + +A L + +T D LC N S D
Sbjct: 168 NTLKKVCGAIWLSLANNAAKASELESVEEILKTNDLKALCFINQKDKLSRD 218
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 215 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 355
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 164 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKE 334
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKD 283
>UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1146
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 260 DGNVPRRLGPKRASKIRK-LFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQR 430
D + + PK+ S +K + + S EDD K++L + + E KPR K+P+ +R
Sbjct: 1012 DSSDEEEIKPKQKSPQKKPILSSSSEDDAIPPPKKKLLDSSDDDEEIKPRQKSPQKKR 1069
>UniRef50_A7EB45 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 700
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 291 NVLPKSVSCSTLAKKMMYVVMSSNACSQPRKEK 389
+V+P+S + S L++ M+ SN S+PRKEK
Sbjct: 69 SVMPESRNSSLLSQSAMFATQVSNRISEPRKEK 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,723,327
Number of Sequences: 1657284
Number of extensions: 13249775
Number of successful extensions: 37685
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 36385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37642
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -