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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11p18
         (699 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g16440.1 68418.m01921 isopentenyl-diphosphate delta-isomerase...   155   2e-38
At3g02780.1 68416.m00270 isopentenyl-diphosphate delta-isomerase...   152   2e-37
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains...    33   0.18 
At2g03610.1 68415.m00321 F-box family protein contains F-box dom...    33   0.24 
At5g12970.1 68418.m01487 C2 domain-containing protein contains I...    30   1.3  
At5g06850.1 68418.m00774 C2 domain-containing protein contains I...    29   3.0  
At5g47390.1 68418.m05840 myb family transcription factor contain...    28   5.2  
At4g10470.1 68417.m01719 expressed protein                             28   5.2  
At1g51570.1 68414.m05804 C2 domain-containing protein contains I...    28   5.2  
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic...    28   6.8  
At2g40840.1 68415.m05042 glycoside hydrolase family 77 protein c...    27   9.0  

>At5g16440.1 68418.m01921 isopentenyl-diphosphate delta-isomerase I
           / isopentenyl diphosphate:dimethylallyl diphosphate
           isomerase I (IPP1) identical to SP|Q38929
          Length = 233

 Score =  155 bits (377), Expect = 2e-38
 Identities = 75/165 (45%), Positives = 107/165 (64%), Gaps = 6/165 (3%)
 Frame = +3

Query: 213 GLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGP-DGDVLLHRAFSVFLFNKRGDM 389
           G++  Q   + +D C+LVDE D  +G  TK  CH +   + + LLHRAFSVFLFN + ++
Sbjct: 8   GMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKYEL 67

Query: 390 FLQRRSSQKVTYPDYYTNACCSHPLY-----IDEKPEEIITAARRRMNHELGIPLDQLDP 554
            LQ+RS  KVT+P  +TN CCSHPLY     I+E    +  AA+R++  ELGI  + +  
Sbjct: 68  LLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDVPV 127

Query: 555 ELFTFMTRVHYHDPGDGVWGEHEIDHILFFQSDVKVKPNSDEISE 689
           + FT + R+ Y  P DG WGEHE+D++LF   DVK++PN DE++E
Sbjct: 128 DEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAE 172


>At3g02780.1 68416.m00270 isopentenyl-diphosphate delta-isomerase II
           / isopentenyl diphosphate:dimethylallyl diphosphate
           isomerase II (IPP2) identical to isopentenyl
           diphosphate:dimethylallyl diphosphate isomerase (IPP2)
           GB:U49259 [Arabidopsis thaliana]
          Length = 284

 Score =  152 bits (368), Expect = 2e-37
 Identities = 74/165 (44%), Positives = 106/165 (64%), Gaps = 6/165 (3%)
 Frame = +3

Query: 213 GLELAQAEALDKDICLLVDEKDNFIGTATKRECHKV-GPDGDVLLHRAFSVFLFNKRGDM 389
           G++  Q   + +D C+LVDE D  +G  +K  CH +   +   LLHRAFSVFLFN + ++
Sbjct: 59  GMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSKYEL 118

Query: 390 FLQRRSSQKVTYPDYYTNACCSHPLY-----IDEKPEEIITAARRRMNHELGIPLDQLDP 554
            LQ+RS+ KVT+P  +TN CCSHPLY     I +    +  AA+R++  ELGI  + +  
Sbjct: 119 LLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLLDELGIVAEDVPV 178

Query: 555 ELFTFMTRVHYHDPGDGVWGEHEIDHILFFQSDVKVKPNSDEISE 689
           + FT + R+ Y  P DG WGEHE+D++LF   DVKV+PN DE++E
Sbjct: 179 DEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAE 223


>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 451

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
 Frame = +3

Query: 30  NEDLGIHCYLYYIVM*KCNSVKFIHTKMLVRKLTRSL-WSTLRVEKRFLASEPVKPATLD 206
           N D+    YL Y+V  +  S+K    K++V     SL W T  ++  +  +E   PAT D
Sbjct: 145 NWDVVTGSYLRYVVE-EGKSIKARKKKVMVLMNNPSLNWKT-SMKGLWTCTEFEHPATFD 202

Query: 207 KDGLELAQAEALDKDICLLVDEKDNF--IGTATKRECHKVGPDG 332
              +++ + + + +D+    D K+ +  IG A KR     GP G
Sbjct: 203 TLAMDIDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPG 246


>At2g03610.1 68415.m00321 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 216

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 23/73 (31%), Positives = 35/73 (47%)
 Frame = +3

Query: 438 TNACCSHPLYIDEKPEEIITAARRRMNHELGIPLDQLDPELFTFMTRVHYHDPGDGVWGE 617
           TN   +HP   DEKP+E I   R+ +  E G  ++++         R   HD GDG+   
Sbjct: 108 TNPYSNHPFRFDEKPQEYIW-KRKIVIAESGEMMNEMLIFGHGVTMRAQVHDVGDGI--- 163

Query: 618 HEIDHILFFQSDV 656
            + D I F + D+
Sbjct: 164 -KRDSICFVEDDL 175


>At5g12970.1 68418.m01487 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 769

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 14  VKLLTERRSRDTLLFILYCNVKV*FSKIHTYENVGQKANKITVEHPKSREKI 169
           + LL+ R  R T LF+L+C +      +  ++ V   A    + HP+ R K+
Sbjct: 699 LSLLSWRDPRATTLFVLFCLIAAIVLYVTPFQVVALLAGIYVLRHPRFRHKL 750


>At5g06850.1 68418.m00774 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 669

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 20  LLTERRSRDTLLFILYCNVKV*FSKIHTYENVGQKANKITVEHPKSREKI 169
           LL+ R  R T LF+++C V      +  ++ +        + HPK R K+
Sbjct: 601 LLSWRDPRATCLFVIFCLVAAMILYVTPFKIIALAGGMFWMRHPKFRSKM 650


>At5g47390.1 68418.m05840 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA-binding domain
          Length = 365

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 483 RASHLCTVDGCSKHLCSNRDMLLFGLISSEGTYHLSC*RG 364
           R SH C  +G +   C NR + LFG+  +EG+   S   G
Sbjct: 4   RCSH-CNHNGHNSRTCPNRGVKLFGVRLTEGSIRKSASMG 42


>At4g10470.1 68417.m01719 expressed protein
          Length = 388

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 591 DPGDGVWGEHEIDHILFFQSDVKVKPNSD 677
           DP D +W +   D       D K+ PN D
Sbjct: 29  DPEDSLWSDFTFDFSFLTSEDHKISPNDD 57


>At1g51570.1 68414.m05804 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 776

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 20  LLTERRSRDTLLFILYCNVKV*FSKIHTYENVGQKANKITVEHPKSREKI 169
           LL+ R  R T LF+L+C +      I  ++ V        + HP+ R K+
Sbjct: 708 LLSWRDPRATALFVLFCLIAAVILYITPFQVVAFAIGLYVLRHPRLRYKL 757


>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
           to heat shock protein 101 GI:6715468 GB:AAF26423 from
           [Arabidopsis thaliana]
          Length = 911

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 429 DYYTNACCSHPLYIDEKPEEIITAARRRMNHELGIPLDQLDPE 557
           D    AC +  + +D +PEEI    R+RM  +L I L  L+ E
Sbjct: 393 DLVDEACANVRVQLDSQPEEIDNLERKRM--QLEIELHALERE 433


>At2g40840.1 68415.m05042 glycoside hydrolase family 77 protein
           contains Pfam profiles PF02446:
           4-alpha-glucanotransferase, PF00686: Starch binding
           domain; contains a non-consensus AT-AC intron between at
           intron 5
          Length = 955

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +3

Query: 528 GIPLDQLDPELFTFMTRVHYHDPGDGVWGEHEIDHILFFQSDVKVKPNSDE 680
           GIP  Q  PE+  F+ R H   P   +W    +  ++  + +   +P ++E
Sbjct: 837 GIPPSQCIPEITHFILRQHVEAP--SMWAIFPLQDMMALKEEYTTRPATEE 885


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,253,958
Number of Sequences: 28952
Number of extensions: 326607
Number of successful extensions: 831
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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