Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11p15
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.8  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 152 YSTFVC*TYYTKLLTVT 102
           YS +V  TYY +L T+T
Sbjct: 60  YSIYVRHTYYRRLYTIT 76


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 152 YSTFVC*TYYTKLLTVT 102
           YS +V  TYY +L T+T
Sbjct: 60  YSIYVRHTYYRRLYTIT 76


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 22   PPRVLSHFGYLLI*VSRYLKWIAGVSW 102
            P + +   GY +  +S+YL WIA +++
Sbjct: 2487 PSKAVMDAGYDVPALSQYLDWIAVMTY 2513



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 22   PPRVLSHFGYLLI*VSRYLKWIA 90
            P R +   GY +  +S+YL WIA
Sbjct: 1989 PSRRVVDAGYDVPTLSKYLDWIA 2011


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
 Frame = +1

Query: 22  PPRVLSH--FGYLLI*VSR---YLKWIAGVSWVTVSN 117
           PP V+    FG   + VS    Y KW++ +SW    N
Sbjct: 562 PPLVIPFLLFGGFFLNVSSIPIYFKWLSFLSWFRYGN 598


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
 Frame = +1

Query: 22  PPRVLSH--FGYLLI*VSR---YLKWIAGVSWVTVSN 117
           PP V+    FG   + VS    Y KW++ +SW    N
Sbjct: 562 PPLVIPFLLFGGFFLNVSSIPIYFKWLSFLSWFRYGN 598


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,972
Number of Sequences: 336
Number of extensions: 3637
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)