BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11p14 (743 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 4e-44 SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 76 3e-14 SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07) 63 2e-10 SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053) 60 2e-09 SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 57 1e-08 SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07 SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 52 4e-07 SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0) 48 8e-06 SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20) 45 6e-05 SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05) 45 7e-05 SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 45 7e-05 SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038) 43 3e-04 SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001 SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 38 0.007 SB_29143| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011 SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011 SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 36 0.026 SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026 SB_29258| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046 SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 34 0.14 SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 33 0.18 SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) 32 0.56 SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021) 31 0.75 SB_39091| Best HMM Match : dsDNA_bind (HMM E-Value=2.3) 31 0.99 SB_5481| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3 SB_4285| Best HMM Match : DUF735 (HMM E-Value=2.4) 31 1.3 SB_5397| Best HMM Match : LRR_1 (HMM E-Value=1.9) 30 1.7 SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3 SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3 SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 29 4.0 SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 29 4.0 SB_46639| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 5.3 SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08) 29 5.3 SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 29 5.3 SB_8597| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3 SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.0 SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 28 7.0 SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 28 7.0 SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05) 28 7.0 SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_53259| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2 SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2 SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36) 28 9.2 SB_32795| Best HMM Match : tRNA_anti (HMM E-Value=4.8e-11) 28 9.2 >SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 740 Score = 175 bits (425), Expect = 4e-44 Identities = 101/227 (44%), Positives = 135/227 (59%), Gaps = 6/227 (2%) Frame = +3 Query: 6 KIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPN 185 KI IEN+GATLDQFDTIDFSDNDIRK++GFPLLKRLK ILLNNNR+ R+ E L +PN Sbjct: 520 KISVIENMGATLDQFDTIDFSDNDIRKIEGFPLLKRLKTILLNNNRVCRVAEGLGECLPN 579 Query: 186 LESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFRK 365 LES+ILTNN + EL DL+PL ++ LR L + + K+ Y + + Sbjct: 580 LESIILTNNAMQELKDLEPLESVKSLRYLRIQGHAQQRKSSEYFYCKLHKLSPYEIGGKP 639 Query: 366 IKQKERDEANTLFKSRKGKEIQREI--AKKAKTFVPGGNMPDPKVTNLTP----QEIHKI 527 I R E KG ++++ + K KTF PG N P +V P +++ I Sbjct: 640 INDNRRKEMQL-----KGCFLEKKAPPSSKPKTFTPGENPPAKRVEQKPPPPPSRDVAAI 694 Query: 528 REAIKNASSLQEVERLTRMLQSGQIPGQKPLQPVTQTNGQHEDEEMD 668 + AI NA SL EV+ L R+L++GQ+PG V T H++EEM+ Sbjct: 695 KAAIANAKSLDEVQGLERLLKAGQVPG------VVPTQQSHDEEEME 735 >SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) Length = 335 Score = 76.2 bits (179), Expect = 3e-14 Identities = 46/133 (34%), Positives = 73/133 (54%) Frame = +3 Query: 9 IPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNL 188 I +IE L ++ +D S N+I ++G L +LK + L NNRI +I EN++ + NL Sbjct: 77 IEKIEGLDMLVN-LQWLDLSFNNIEVIEGLDKLTKLKDLTLYNNRITKI-ENMDS-LTNL 133 Query: 189 ESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFRKI 368 + NN++ +L ++ L LRTL+L NP + Y+ YV +P+L LDFR I Sbjct: 134 HVFSIGNNSLKQLDNVIYLRRFKNLRTLNLSFNPFCEDSKYKEYVIAHLPDLVYLDFRLI 193 Query: 369 KQKERDEANTLFK 407 + R+ A +K Sbjct: 194 DETAREAATERYK 206 >SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07) Length = 534 Score = 63.3 bits (147), Expect = 2e-10 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 2/127 (1%) Frame = +3 Query: 9 IPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLE-HYIPN 185 + ++ENL LD DT++ S+N IR ++ L L + + +NR+ G+ E Sbjct: 46 LKKVENL-EELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGDIKELASCQK 104 Query: 186 LESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANK-NHYRAYVAFKMPELRLLDFR 362 L V L+ N I + +D L+ +P L L+L+ NPV K +YR + K+ L+ LD R Sbjct: 105 LSIVDLSYNKIDDPNIVDVLAEMPNLSVLNLIGNPVIKKIKNYRKNMILKLKNLKYLDDR 164 Query: 363 KIKQKER 383 + +ER Sbjct: 165 PVFPRER 171 >SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053) Length = 377 Score = 60.1 bits (139), Expect = 2e-09 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 1/125 (0%) Frame = +3 Query: 123 ILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDL-DPLSTLPKLRTLSLMHNPVAN 299 + L +N ++ + L H + LE ++L N +++L D+ L + +L L+L +NP+A Sbjct: 170 VYLQDNMLIEVNGLLRH-LTCLEVLMLNGNQLTKLTDVVHELRAMQRLHDLNLFNNPLAQ 228 Query: 300 KNHYRAYVAFKMPELRLLDFRKIKQKERDEANTLFKSRKGKEIQREIAKKAKTFVPGGNM 479 YR+YV ++ L++LD R++ Q ER K++K E RE+ K+ +F + Sbjct: 229 DYDYRSYVIHRIKSLKILDRREVLQAER------IKAQKKYEPDREMVKETVSFGRRVDG 282 Query: 480 PDPKV 494 P KV Sbjct: 283 PPQKV 287 >SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) Length = 192 Score = 57.2 bits (132), Expect = 1e-08 Identities = 27/71 (38%), Positives = 43/71 (60%) Frame = +3 Query: 180 PNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDF 359 PNL+ + L NNIS+L ++D L+ LP L T+SL NP+ + +H++ Y K+ L L F Sbjct: 110 PNLKILCLQGNNISDLHEIDKLAALPNLHTISLQGNPIEDDDHFKCYTTSKL--LHLKKF 167 Query: 360 RKIKQKERDEA 392 ++D+A Sbjct: 168 NSAPLTKQDKA 178 >SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1152 Score = 53.6 bits (123), Expect = 2e-07 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 5/142 (3%) Frame = +3 Query: 6 KIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPN 185 +I ++NL L + S++ +++L G LK + +N I +I ENL + Sbjct: 27 EIEVLQNLDC-LPHLTELCVSESSLKELSGIDKCTNLKKVYFYDNHISKI-ENLSS-LTR 83 Query: 186 LESVILTNNNISELGDLDPLSTLPKLRTLSLMH-----NPVANKNHYRAYVAFKMPELRL 350 L + L NNNI + DL L LP L++LSL NPV+ +Y ++ F +P+L Sbjct: 84 LTVLWLNNNNIQAIEDLTNLVHLPHLKSLSLKDPTYGPNPVSLLCNYATHLLFHLPKLTR 143 Query: 351 LDFRKIKQKERDEANTLFKSRK 416 LD + K E S+K Sbjct: 144 LDSYDVDNKALKELAEATVSKK 165 Score = 29.1 bits (62), Expect = 4.0 Identities = 24/67 (35%), Positives = 36/67 (53%) Frame = +3 Query: 93 GFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTL 272 GF L+ + L N I + E L P L+ + L++NN++ L D L LP+LR L Sbjct: 1067 GFESCSSLEELSLEGNCISKF-EGLVRN-PKLKWLNLSSNNLTIL-DTGMLERLPELRYL 1123 Query: 273 SLMHNPV 293 SL +N + Sbjct: 1124 SLENNNI 1130 >SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) Length = 219 Score = 52.4 bits (120), Expect = 4e-07 Identities = 35/104 (33%), Positives = 54/104 (51%) Frame = +3 Query: 87 LDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLR 266 L FP L L+ + L++NRI +NL P L + L+ N I +L L+PL L L+ Sbjct: 53 LKNFPKLPNLRKLELSDNRISSGLQNLTG-SPKLTHLSLSGNKIKDLETLEPLEKLSNLK 111 Query: 267 TLSLMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEANT 398 +L L + V N + Y+ V +P LR LD + E +E ++ Sbjct: 112 SLDLFNCEVTNVDDYKNKVFELIPSLRYLDGCDKEGNEAEETDS 155 >SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0) Length = 480 Score = 48.0 bits (109), Expect = 8e-06 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 20/136 (14%) Frame = +3 Query: 9 IPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLN-----NNRIVRIGENLEH 173 I IENL + L + + + N I +++G L L + L +NRIV + + LEH Sbjct: 343 IKVIENLNS-LTKLEKLYLVQNKIGRIEGLEHLTELTMVELGANKIRSNRIVEL-KGLEH 400 Query: 174 YIPNLESVILTNNNISELG---------------DLDPLSTLPKLRTLSLMHNPVANKNH 308 + +LE + +++N I E+ DLD L+ PKL T+ L NP++ Sbjct: 401 -LESLEELYISHNGIEEIKGLESLFNDNQLKHWEDLDELAKCPKLHTVYLERNPLSRDTA 459 Query: 309 YRAYVAFKMPELRLLD 356 YR V +P L+ +D Sbjct: 460 YRRKVKLALPALKQID 475 >SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20) Length = 681 Score = 45.2 bits (102), Expect = 6e-05 Identities = 34/95 (35%), Positives = 53/95 (55%) Frame = +3 Query: 9 IPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNL 188 I I++L A L + +D DN I ++ G LK L+ ++L NRI +I NLE + L Sbjct: 175 IRNIQHL-ANLRRLIFLDIYDNQIEEISGLSSLKSLRVLMLGKNRIRKI-NNLE-ALTKL 231 Query: 189 ESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPV 293 + + L N IS+ ++ LS L +LR L+L N + Sbjct: 232 DVLDLHGNRISK---IENLSHLTELRVLNLAGNEI 263 Score = 45.2 bits (102), Expect = 6e-05 Identities = 30/92 (32%), Positives = 51/92 (55%) Frame = +3 Query: 177 IPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLD 356 + NL+ + L+ N IS D++ L+ + LSL NP A+ Y+ V + LR LD Sbjct: 322 LSNLQRLFLSFNCISRFEDINCLTRSTSITELSLDGNPFASDVTYKQTVLKSVTCLRQLD 381 Query: 357 FRKIKQKERDEANTLFKSRKGKEIQREIAKKA 452 ++I ++ER A + +RK +E ++E+ K A Sbjct: 382 MKRITEEERRIA--MVMARKEEEKKKEVNKLA 411 >SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05) Length = 252 Score = 44.8 bits (101), Expect = 7e-05 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 111 RLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNP 290 RLK + L+ N I + + +E + LE++ L NNIS L DL L L L+ L L NP Sbjct: 49 RLKNLDLSRNAIQSL-QGVES-LQLLETLNLYYNNISYLQDLSALKYLTNLKELDLRLNP 106 Query: 291 VA-NKNHYRAYVAFKMPELRLL 353 V N+ YR Y+ +P L+ L Sbjct: 107 VTKNEPDYRLYIVHLLPSLKRL 128 >SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) Length = 288 Score = 44.8 bits (101), Expect = 7e-05 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 3/120 (2%) Frame = +3 Query: 57 IDFSDNDIRKLDGFPL-LKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGD 233 +D S N I+ + P L+ LK ++LN+N + + L+ + +E I N +S L + Sbjct: 131 LDLSHNSIQFVSATPRDLRHLKSLILNHNNLQSLS-GLDCLVGLIELGI-AENRVSTLTE 188 Query: 234 LDPLSTLPKLRTLSLMHNPVANKNHYRAYV--AFKMPELRLLDFRKIKQKERDEANTLFK 407 L+ + +LR LS+ NP+ + +YR + F ++ +LD + +ER N FK Sbjct: 189 FSKLTCMSQLRYLSVNGNPLTRETYYRVKIFHYFNGKDI-VLDNKSKTVRERARLNQHFK 247 >SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038) Length = 92 Score = 42.7 bits (96), Expect = 3e-04 Identities = 24/68 (35%), Positives = 34/68 (50%) Frame = +3 Query: 153 IGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFK 332 I N I LES + +N + DLD L+ PKL T+ L NP++ YR V Sbjct: 21 ISHNGIEEIKGLES-LFNDNQLEHWEDLDELAKCPKLHTVYLERNPLSRDTAYRRKVKLA 79 Query: 333 MPELRLLD 356 +P L+ +D Sbjct: 80 LPALKQID 87 >SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3259 Score = 41.1 bits (92), Expect = 0.001 Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 6/208 (2%) Frame = +3 Query: 9 IPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNL 188 I + +LG L + + LDG L L + L N I + + NL Sbjct: 745 ISTVRDLGTCLTNLRMLWMCRCSLSDLDGISSLSSLAELYLAFNDISDVSP--VSMLDNL 802 Query: 189 ESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFRK- 365 + + L N + E+ ++ L+ L+ L+L NPV H A EL D+RK Sbjct: 803 QVLDLEGNLVDEIAQVEFLTLCSSLKCLNLEGNPVCTAPHPDA----SEEELASYDYRKA 858 Query: 366 IKQ-----KERDEANTLFKSRKGKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEIHKIR 530 + Q + D+ L + GK + R++ AK G +PD +T + H I Sbjct: 859 VHQAVPSLRFLDDEPFLVEKVDGKPVLRDMPDSAK----GVRIPDHLIT-----DWHIIN 909 Query: 531 EAIKNASSLQEVERLTRMLQSGQIPGQK 614 E IK ++ E+ R SG P + Sbjct: 910 EGIKAVDVAEDDEKANRP-SSGNRPSSR 936 >SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) Length = 481 Score = 38.3 bits (85), Expect = 0.007 Identities = 30/98 (30%), Positives = 45/98 (45%) Frame = +3 Query: 9 IPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNL 188 I +I+NL + + DN+I K+ L + L NN+I RI E L+H L Sbjct: 41 IDEIDNL-SMCKNLSVLYLYDNNISKIKNLGFAGNLTHLYLQNNKISRI-EGLDH-CRRL 97 Query: 189 ESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANK 302 + L N+I+ + LD L L +L + H P K Sbjct: 98 SKLYLGGNSITVIEGLDKLENLRELH-MEKQHLPPGEK 134 Score = 29.1 bits (62), Expect = 4.0 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Frame = +3 Query: 105 LKRLKCIL-LNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDP-LSTLPKLRTLSL 278 L + C+L ++ N I I E + N+ +N ++++ +L ++ P L L + Sbjct: 145 LSKCLCVLNISENNIDSIDEL--QCLTNMTQFFTEHNLLADMKELSRVMAAWPYLWRLEV 202 Query: 279 MHNPVANKNHYRAYVAFKMPELRLLDFRKI 368 NP+ K YR + L +LD ++I Sbjct: 203 SGNPLCQKKKYRDRIIVMSNSLVMLDGKEI 232 >SB_29143| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 123 Score = 37.5 bits (83), Expect = 0.011 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +3 Query: 270 LSLMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEA 392 LS + + YR Y+ K+P+L+ LD R +K++ER EA Sbjct: 11 LSFTDHDEEDYQRYRYYILHKLPKLKFLDSRTVKEQERQEA 51 >SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1465 Score = 37.5 bits (83), Expect = 0.011 Identities = 23/61 (37%), Positives = 32/61 (52%) Frame = +3 Query: 114 LKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPV 293 LK + LNNN + RI + LE + L NNNI+EL D + P L+ L + N + Sbjct: 190 LKSLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITEL-DQRLFTRTPSLKLLFVSFNSL 248 Query: 294 A 296 A Sbjct: 249 A 249 Score = 33.5 bits (73), Expect = 0.18 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Frame = +3 Query: 54 TIDFSDNDIRKL--DGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISEL 227 ++D S N + L D F L L+ + L+ NR+ I E H + L+ + L NNN+ Sbjct: 120 SLDLSANRLSSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTF 179 Query: 228 GDLDPLSTLPKLRTLSLMHN 287 + TL L++L L +N Sbjct: 180 SERTLQGTL-SLKSLQLNNN 198 Score = 29.5 bits (63), Expect = 3.0 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +3 Query: 96 FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISEL--GDLDPLSTLPKLRT 269 F L+ L+ + LNNN I + + L P+L+ + ++ N+++ L G LST K Sbjct: 208 FRNLRGLEILYLNNNNITELDQRLFTRTPSLKLLFVSFNSLATLPRGLFYSLSTDAK--- 264 Query: 270 LSLMHNP 290 +SL +NP Sbjct: 265 VSLHNNP 271 >SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) Length = 1466 Score = 36.3 bits (80), Expect = 0.026 Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 2/170 (1%) Frame = +3 Query: 162 NLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPV-ANKNHYRAYVAFKMP 338 NLE +PN+ES+ ++N I E+ L+ LS +L L L HN + A + A K+ Sbjct: 964 NLESLLPNIESLNWSHNCIEEINHLESLS---ELEVLDLSHNKLRAIPTNLNA----KLG 1016 Query: 339 ELRLLDFRKIKQKERDEANTLFKSRKGKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEI 518 +R L+ + D L+ S +++ + + + V G++P + +L + Sbjct: 1017 NIRKLNLANNQLSCVDGLEKLY-SLVELDLRSNLLTEVSSVVLIGDLPCLENLHLEGNPL 1075 Query: 519 HKIRE-AIKNASSLQEVERLTRMLQSGQIPGQKPLQPVTQTNGQHEDEEM 665 K ++ S E RL + GQ P + ++ V++ + +D E+ Sbjct: 1076 TKESSYRVRVLSGFGERARLVSL--DGQPPSDREMKKVSELLSREQDFEI 1123 >SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 672 Score = 36.3 bits (80), Expect = 0.026 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%) Frame = +3 Query: 18 IENLGATLDQFDTIDFSDNDI----RKLDGFPLLKRLKCILLNNNRIVRIGENLEHY--- 176 ++N+ +L + ID S N++ R F LK +K I L+ N++ G L Sbjct: 462 LDNVVPSLKLLEHIDLSRNNLSNWTRMTSTFDGLKSIKHINLSANKMCDAGVGLLAKALV 521 Query: 177 -IPNLESVILTNNNISELGDL---DPLSTLPKLRTLSLMHNPVANK 302 + NLE + L N I+ G + D LS L +L LSL N +ANK Sbjct: 522 NLSNLEVLHLAWNEITCEGAILLADSLSGLTRLEALSLKSNKIANK 567 >SB_29258| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 487 Score = 35.5 bits (78), Expect = 0.046 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%) Frame = +3 Query: 39 LDQFDTIDFSDNDIRKLD-GFPLLKR---LKCILLNNNRIVRIGEN-LEHYIPNLESVIL 203 + QF +D+ D D D G L R ++C+ L+N +I + YIPN+E + L Sbjct: 271 IQQF-VVDYCDRDHEITDIGVTALARFCDIRCLHLSNGQISDNALLVIAEYIPNIEDLSL 329 Query: 204 TNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFR 362 + +S++G + + KL +L ++HN ++ AF + DFR Sbjct: 330 EFSQVSDVGIFKLMQSCRKLESL-VVHNSDNHERGITDASAFMIGHYACEDFR 381 >SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) Length = 575 Score = 33.9 bits (74), Expect = 0.14 Identities = 24/68 (35%), Positives = 34/68 (50%) Frame = +3 Query: 90 DGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRT 269 +G + L + L NN I I + + NL+S+ L +NNIS L + + LP L Sbjct: 122 NGLQMFTNLINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNIS-LWEGNISRDLPSLEI 180 Query: 270 LSLMHNPV 293 L L NPV Sbjct: 181 LELDGNPV 188 >SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) Length = 2996 Score = 33.5 bits (73), Expect = 0.18 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Frame = +3 Query: 6 KIPQIENLGATLDQFDTIDFSDNDIRKLDGFPL--LKRLKCILLNNNRIVRIGENLEHYI 179 KI IEN GA +D S+N I ++D L L L +LLNNN++ + + + Sbjct: 362 KIVAIEN-GAFPLNLRVMDLSNNKIGRIDKIVLKDLVNLNSLLLNNNQLTILPNGGDFHN 420 Query: 180 PNLESVILTNNNISEL 227 ++ + L NN ++ + Sbjct: 421 KQIDRLDLKNNRLTTI 436 >SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) Length = 632 Score = 31.9 bits (69), Expect = 0.56 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = +3 Query: 183 NLESVILTNNNISEL-GDLDPLSTLPKLRTLSLMHNPVA 296 +L S+ L+ NN+ +L ++ L TLPKLR L + NP+A Sbjct: 206 HLLSLDLSCNNLPDLYSTINTLKTLPKLRNLVMQGNPLA 244 >SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021) Length = 198 Score = 31.5 bits (68), Expect = 0.75 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = +3 Query: 9 IPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGE 161 + ++ENL LD DT++ S+N IR ++ L L + + +NR+ G+ Sbjct: 138 LKKMENL-EELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGD 187 >SB_39091| Best HMM Match : dsDNA_bind (HMM E-Value=2.3) Length = 227 Score = 31.1 bits (67), Expect = 0.99 Identities = 21/79 (26%), Positives = 36/79 (45%) Frame = +3 Query: 276 LMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEANTLFKSRKGKEIQREIAKKAK 455 L H+P NKN +A + +LR L K+ + + D + K + + +E A++ Sbjct: 133 LWHSPETNKNGLLRQIAEREDKLRKLKMVKMYRTKNDLTDLQKLIDKWRNVSQEAAERLL 192 Query: 456 TFVPGGNMPDPKVTNLTPQ 512 T + P PK+ L Q Sbjct: 193 TKIK--KEPSPKMKELLDQ 209 >SB_5481| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 366 Score = 30.7 bits (66), Expect = 1.3 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%) Frame = +3 Query: 438 IAKKAKTFVPGGNMPDPKV-TNLTPQEIHKIREAIKNASSLQEVERLTRMLQSGQIPGQK 614 + K + +V G N P P + T LT I+ + N+ +L R T + S +P Q+ Sbjct: 277 VPKALEPYVVGANAPSPPLATPLTQGAIN----STNNSRALSRTSR-TSSMASDSLPSQR 331 Query: 615 PLQPVTQTNGQHEDEEMDTD 674 + P + + E D+D Sbjct: 332 TISPCSYPSSPASVSEADSD 351 >SB_4285| Best HMM Match : DUF735 (HMM E-Value=2.4) Length = 267 Score = 30.7 bits (66), Expect = 1.3 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Frame = +3 Query: 99 PLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSL 278 P+LK + + + +GE L+ I L++++ T + + ++ TL + S Sbjct: 131 PVLKNARLVPVPQGGTENMGE-LD--IKVLQNLLSTTSESTSNPSMEGCITLETSLSRSA 187 Query: 279 MHNPVANKNHYRAYVAFKMPELRLLDFR--KIKQKERDEANTL 401 A N Y+ Y AFKMP RL + I + E+D+ T+ Sbjct: 188 SKKTEAEVNKYKQYHAFKMPITRLRSHQILAINRAEQDKILTV 230 >SB_5397| Best HMM Match : LRR_1 (HMM E-Value=1.9) Length = 193 Score = 30.3 bits (65), Expect = 1.7 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +3 Query: 213 NISELGDLDPLST-LPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLD 356 +IS+L L+ L P LRTL L NP+ + + Y V P L LD Sbjct: 131 DISKLSALEALQGGCPGLRTLDLRGNPICHSDTYPKDVIALFPNLTKLD 179 >SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 825 Score = 29.9 bits (64), Expect = 2.3 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Frame = +3 Query: 96 FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNIS-ELGDLD-PLSTLPKLRT 269 F L LK + L NNRI I + + +LE + L+NN+IS + +++ P L L + Sbjct: 152 FKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNNDISWTVEEMNGPFRGLTNLAS 211 Query: 270 LSLMHNPV 293 L L N + Sbjct: 212 LRLDGNRI 219 >SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 688 Score = 29.9 bits (64), Expect = 2.3 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +3 Query: 105 LKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISEL 227 L+ L+ + L N + + E L +PNL+ + L NN+I+E+ Sbjct: 39 LQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNHINEV 79 Score = 29.1 bits (62), Expect = 4.0 Identities = 28/117 (23%), Positives = 50/117 (42%) Frame = +3 Query: 96 FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLS 275 F L LK + L NN I + ENL + L++++L NNI L + +T+P Sbjct: 60 FERLPNLKWLDLRNNHINEVPENLGAH-RCLKNLLLEGNNIRTL-PFELGATVPD----- 112 Query: 276 LMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEANTLFKSRKGKEIQREIAK 446 P+ + + ++P + + + + D TL + +K K+ E K Sbjct: 113 --QQPIVTEYECLSPEKVRLPPIIQAAASRSRNRTLDSPETLLQGQKAKQFVHEKQK 167 >SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) Length = 212 Score = 29.1 bits (62), Expect = 4.0 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +3 Query: 81 RKLDGFPLL--KRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTL 254 R+L FPL R +LLN+NR+ + + + N+ ++ L N I E+ + L Sbjct: 100 RRLRNFPLPLPPRTSTLLLNDNRLSLLRYDFFLGLNNIRTLNLRRNGIKEI-EFGAFRNL 158 Query: 255 PKLRTLSLMHN 287 L +L L N Sbjct: 159 TALESLYLFRN 169 >SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1243 Score = 29.1 bits (62), Expect = 4.0 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +3 Query: 39 LDQFDTIDFSDNDIRKLDG-FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNN 212 L++ + SDN+I L L+ L+ + L++NR++ + + L ++ L + + NN Sbjct: 189 LEKLQVLILSDNEIGALPADLNALENLRELYLDDNRLMSLPKKLHEFLTGLYILDINNN 247 >SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4529 Score = 29.1 bits (62), Expect = 4.0 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Frame = +3 Query: 459 FVPGGNMPDPKVTNLTPQEIHKIREAIKNASSLQEVERLTRMLQSGQIPGQKPLQ--PVT 632 FVPG DP + +I ++R + Q + R +Q GQ+ LQ V Sbjct: 2261 FVPGALPADPNNPQMLQPQIAQMRPQAPDMMQQQLMMEYQRRMQQRHDLGQQTLQYDKVV 2320 Query: 633 QTNGQHEDEEMDTDQANG 686 Q Q + +M +Q G Sbjct: 2321 QELHQQQGVQMQVNQPQG 2338 >SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) Length = 685 Score = 29.1 bits (62), Expect = 4.0 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +2 Query: 515 NP*DPRSNQECIIPTGGRTSDKNVAVWSDSRAKTFTARDT 634 N D ++ I TGG T+D+++ W+ S T + DT Sbjct: 544 NSNDNNTSSSGIEATGGGTADRHIRFWNGSTGATLNSVDT 583 >SB_46639| Best HMM Match : G_glu_transpept (HMM E-Value=0) Length = 566 Score = 28.7 bits (61), Expect = 5.3 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +3 Query: 15 QIENLGATLDQFDTIDFSDNDIRKLD 92 Q++ L T DQ D +DF+++ + KLD Sbjct: 240 QLDKLDFTEDQLDKLDFTEDQLDKLD 265 Score = 28.3 bits (60), Expect = 7.0 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +3 Query: 15 QIENLGATLDQFDTIDFSDNDIRKLD 92 Q++ L T DQ D +DF+++ + KLD Sbjct: 250 QLDKLDFTEDQLDKLDFTEDKLGKLD 275 >SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08) Length = 537 Score = 28.7 bits (61), Expect = 5.3 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +3 Query: 183 NLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 287 NL ++IL+NN I + D + L LR LSL HN Sbjct: 48 NLVTLILSNNEIIAI-DENAFQGLTSLRNLSLSHN 81 >SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) Length = 1182 Score = 28.7 bits (61), Expect = 5.3 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +3 Query: 441 AKKAKTFVPGGNMPDPKVTNLTPQEIHKIREAIKNASSLQEV-ERLTRMLQSGQIPGQKP 617 AKKA G+MPDPK T L + + K A SL + + L +L+ ++ +K Sbjct: 1061 AKKAPAKSKKGSMPDPKQTTL----FASMGKTSKEAQSLSDSDDELGSLLEKQKVSPKKK 1116 Query: 618 LQPVTQTNGQHEDEEMDTDQA 680 P + + D+D+A Sbjct: 1117 SSPKKKGKAP-SSKSADSDEA 1136 >SB_8597| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 632 Score = 28.7 bits (61), Expect = 5.3 Identities = 16/64 (25%), Positives = 33/64 (51%) Frame = +3 Query: 93 GFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTL 272 G ++ R++ L I ++ E +E ++P+ S+I N+ L + ++ + KL T Sbjct: 60 GSSIVTRMQATLCATRIIRKVPELMEIFVPSTRSLISERNHGVLLTGITLVTVMCKLNTE 119 Query: 273 SLMH 284 +L H Sbjct: 120 TLQH 123 >SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 2639 Score = 28.3 bits (60), Expect = 7.0 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 3/29 (10%) Frame = -2 Query: 151 LTILLLFNRIHFN---LFSSGKPSSFLMS 74 +T+LLLFN +H N L +SGKP +F S Sbjct: 1618 VTLLLLFNLVHTNERPLDNSGKPLTFYPS 1646 >SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) Length = 695 Score = 28.3 bits (60), Expect = 7.0 Identities = 21/74 (28%), Positives = 32/74 (43%) Frame = +3 Query: 393 NTLFKSRKGKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEIHKIREAIKNASSLQEVER 572 N F+S ++ R IAK TF P + P + NL I A NA+S + Sbjct: 273 NLKFESFSKDDLDRIIAKFLVTFTPDDDSPADPLANLR-NAIQGNVPASANATSNSTADS 331 Query: 573 LTRMLQSGQIPGQK 614 + R G + G++ Sbjct: 332 VKRSAIKGMLYGEQ 345 >SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) Length = 791 Score = 28.3 bits (60), Expect = 7.0 Identities = 17/50 (34%), Positives = 31/50 (62%) Frame = +3 Query: 138 NRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 287 N+I ++ E+++ ++ NLE +IL+NN + +L + L KLR L + N Sbjct: 735 NQISKLPEDIQ-WLVNLEVLILSNNLLKKLP--RGIGALRKLRVLDIEEN 781 >SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05) Length = 1200 Score = 28.3 bits (60), Expect = 7.0 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +3 Query: 153 IGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRA 317 + E ++ L+ +IL NNI E G + L LP++ L L +N N +A Sbjct: 818 VNEFCDNNSQKLKHLILPVNNIGERGCKELLGLLPQILVLDLGYNRRVNDECMKA 872 >SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 379 Score = 28.3 bits (60), Expect = 7.0 Identities = 17/50 (34%), Positives = 31/50 (62%) Frame = +3 Query: 138 NRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 287 N+I ++ E+++ ++ NLE +IL+NN + +L + L KLR L + N Sbjct: 310 NQISKLPEDIQ-WLVNLEVLILSNNLLKKLP--RGIGALRKLRVLDIEEN 356 >SB_53259| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 345 Score = 27.9 bits (59), Expect = 9.2 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +2 Query: 530 RSNQECIIPTGGRTSDKNVAVWSDSRAKTFTARDTNKW 643 RSNQ+ I T R SDK S+ +T +KW Sbjct: 52 RSNQDIKIETLSRDSDKTEVSQSEDNTETDATNKKSKW 89 >SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1820 Score = 27.9 bits (59), Expect = 9.2 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -3 Query: 309 NGFCWQLDCA*VIMFAALVMYLMDPNH--QVLRYCCLLKSQTLNLVYNVPNSLLSSRS 142 NGFCW C V F+ + + + P + V R ++K +++ + N + R+ Sbjct: 264 NGFCWSPSCLSVPYFSTALSWYLKPENIGHVRRLIEIIKQFRESILQTIANMRMGVRA 321 >SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36) Length = 852 Score = 27.9 bits (59), Expect = 9.2 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +3 Query: 129 LNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 287 L+NNRI + + +L+++ L+ NNISE+ L + L +L L +N Sbjct: 628 LSNNRITSVPVGMPCLATSLQTLNLSGNNISEVKTLAQFPS--SLSSLDLSNN 678 >SB_32795| Best HMM Match : tRNA_anti (HMM E-Value=4.8e-11) Length = 305 Score = 27.9 bits (59), Expect = 9.2 Identities = 16/62 (25%), Positives = 28/62 (45%) Frame = +3 Query: 357 FRKIKQKERDEANTLFKSRKGKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEIHKIREA 536 F KI + + +A L++ K K +RE + K N+ D + + P E + + Sbjct: 113 FEKIAKAQLKKATKLYQQEKRKSEEREKKEAEKAQQREKNLEDARNITIKPDESLPVAKQ 172 Query: 537 IK 542 IK Sbjct: 173 IK 174 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,430,374 Number of Sequences: 59808 Number of extensions: 478607 Number of successful extensions: 1354 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 1237 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1345 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2010148439 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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