Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p14
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09760.1 68414.m01095 U2 small nuclear ribonucleoprotein A, p... 194 5e-50
At3g50690.1 68416.m05546 leucine-rich repeat family protein 47 1e-05
At4g03260.1 68417.m00445 leucine-rich repeat family protein cont... 40 0.001
At1g04210.1 68414.m00411 leucine-rich repeat family protein / pr... 40 0.002
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 39 0.004
At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferlin... 39 0.004
At3g17920.1 68416.m02282 leucine-rich repeat family protein cont... 38 0.005
At1g47890.1 68414.m05333 disease resistance family protein conta... 38 0.005
At1g78230.1 68414.m09116 leucine-rich repeat family protein 38 0.007
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 37 0.016
At1g48540.2 68414.m05428 leucine-rich repeat family protein 36 0.021
At1g48540.1 68414.m05427 leucine-rich repeat family protein 36 0.021
At1g72180.1 68414.m08346 leucine-rich repeat transmembrane prote... 34 0.087
At2g33080.1 68415.m04056 leucine-rich repeat family protein cont... 33 0.15
At3g23010.1 68416.m02901 disease resistance family protein / LRR... 31 1.1
At4g24490.1 68417.m03510 geranylgeranyl transferase alpha subuni... 30 1.4
At1g17440.2 68414.m02133 transcription initiation factor IID (TF... 30 1.4
At1g17440.1 68414.m02132 transcription initiation factor IID (TF... 30 1.4
At5g20690.1 68418.m02457 leucine-rich repeat transmembrane prote... 30 1.9
At4g37810.1 68417.m05350 expressed protein 30 1.9
At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related... 30 1.9
At1g56660.1 68414.m06516 expressed protein 30 1.9
At2g46490.1 68415.m05786 expressed protein (APS2) identical to c... 29 2.5
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 29 3.3
At4g27890.1 68417.m04003 nuclear movement family protein contain... 29 3.3
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 29 4.3
At4g14605.1 68417.m02247 mitochondrial transcription termination... 29 4.3
At4g04220.1 68417.m00598 disease resistance family protein conta... 29 4.3
At2g32680.1 68415.m03995 disease resistance family protein conta... 29 4.3
At1g72460.1 68414.m08379 leucine-rich repeat transmembrane prote... 29 4.3
At4g36080.1 68417.m05136 FAT domain-containing protein / phospha... 28 5.7
At3g42880.1 68416.m04495 leucine-rich repeat transmembrane prote... 28 5.7
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 28 5.7
At4g37920.1 68417.m05362 expressed protein 28 7.5
At4g24760.1 68417.m03545 expressed protein 28 7.5
At3g20190.1 68416.m02559 leucine-rich repeat transmembrane prote... 28 7.5
At1g74180.1 68414.m08591 leucine-rich repeat family protein cont... 28 7.5
At1g70940.1 68414.m08184 auxin transport protein, putative (PIN3... 28 7.5
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 28 7.5
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 28 7.5
At1g33950.1 68414.m04208 avirulence-responsive family protein / ... 28 7.5
At1g02290.1 68414.m00171 expressed protein 28 7.5
At4g33330.1 68417.m04740 glycogenin glucosyltransferase (glycoge... 27 9.9
At4g28490.1 68417.m04076 leucine-rich repeat transmembrane prote... 27 9.9
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 27 9.9
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 27 9.9
At2g14960.1 68415.m01701 auxin-responsive GH3 family protein sim... 27 9.9
>At1g09760.1 68414.m01095 U2 small nuclear ribonucleoprotein A,
putative identical to U2 small nuclear ribonucleoprotein
A' (U2 snRNP-A') [Arabidopsis thaliana]
SWISS-PROT:P43333; supported by
cDNA:gi_16649064_gb_AY059902.1_
Length = 249
Score = 194 bits (473), Expect = 5e-50
Identities = 97/202 (48%), Positives = 138/202 (68%), Gaps = 2/202 (0%)
Frame = +3
Query: 6 KIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPN 185
KIP IENLGAT DQFDTID SDN+I KL+ FP L RL +L+NNNRI RI NL ++P
Sbjct: 30 KIPVIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLINNNRITRINPNLGEFLPK 89
Query: 186 LESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFRK 365
L S++LTNN + L ++DPL+++PKL+ LSL+ N + K +YR YV K+ LR+LDF K
Sbjct: 90 LHSLVLTNNRLVNLVEIDPLASIPKLQYLSLLDNNITKKANYRLYVIHKLKSLRVLDFIK 149
Query: 366 IKQKERDEANTLFKSRKGKEIQREIAKK--AKTFVPGGNMPDPKVTNLTPQEIHKIREAI 539
IK KER EA +LF S++ +E ++++++ K N PKV T ++I I+ AI
Sbjct: 150 IKAKERAEAASLFSSKEAEEEVKKVSREEVKKVSETAENPETPKVVAPTAEQILAIKAAI 209
Query: 540 KNASSLQEVERLTRMLQSGQIP 605
N+ +++E+ RL + L+ GQ+P
Sbjct: 210 INSQTIEEIARLEQALKFGQVP 231
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +3
Query: 78 IRKLDGFPLLKRLKCILLNNNRI-VRIGENLEHYIPNLESVILTNNNISELGDLDPLSTL 254
+ L+ FP L L+ ++L++NRI V + +E + + + L+NN I + DL PL+ L
Sbjct: 60 VSSLEQFPRLGNLQKLILSDNRITVGLEFLVEAGLDSFCDLDLSNNRIQFVEDLAPLAEL 119
Query: 255 PKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEAN 395
KL +L L PV YR+ V + L+ LD + ER E++
Sbjct: 120 -KLVSLDLYECPVTRLKDYRSRVFGLIKTLKYLDKTDAEGNERPESD 165
>At4g03260.1 68417.m00445 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 677
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/86 (33%), Positives = 43/86 (50%)
Frame = +3
Query: 30 GATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTN 209
GA ++ S N I ++G L RL+ + L+ NRI+R+G L +L+ + L
Sbjct: 437 GALPRGLHALNLSKNSISVIEGLRELTRLRVLDLSYNRILRLGHGLAS-CSSLKELYLAG 495
Query: 210 NNISELGDLDPLSTLPKLRTLSLMHN 287
N ISE ++ L L KL L L N
Sbjct: 496 NKISE---IEGLHRLLKLTVLDLRFN 518
>At1g04210.1 68414.m00411 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1112
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 39 LDQFDTIDFSDNDIRKLDG-FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNN 215
L + +D S N I+ L L L + + +NR++ + L + NLES+ ++NN
Sbjct: 175 LKSLEYLDLSFNKIKSLPNEIGYLSSLTFLKVAHNRLMELSPVLA-LLQNLESLDVSNNR 233
Query: 216 ISELGDLDPLSTLPKLRTLSLMHN 287
++ L LD L+ +P+L+ L+L +N
Sbjct: 234 LTTLHPLD-LNLMPRLQILNLRYN 256
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +3
Query: 261 LRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEA 392
L+ +S +P+ ++ HYR Y+ +P+L++LD I++ +RD+A
Sbjct: 324 LKYISSKASPICSEKHYRMYMINSLPKLQVLDNLAIRKSDRDKA 367
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 78 IRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISEL-GDLDPLSTL 254
I KL+ +L ++L+ NRIV GE+ +P L + + + +S+L L L
Sbjct: 138 IHKLNIVGEFTQLHTLILDKNRIVGFGEDCFSCMPKLTYLSMCDTLVSDLWTSAAALLKL 197
Query: 255 PKLRTL 272
P L+ L
Sbjct: 198 PSLKEL 203
>At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferling
(PFI) almost identical to tubulin folding cofactor E
(Pfifferling; PFI) GI:20514267 from [Arabidopsis
thaliana]; identical to cDNA tubulin folding cofactor E,
GI:20514266
Length = 531
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/119 (22%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Frame = +3
Query: 72 NDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHY---------IPNLESVILTNNNISE 224
+++ KL P L++L LN N++ RI +++ P+L ++L NNI +
Sbjct: 277 SEVLKLSQLPCLEQL---YLNKNKLSRIFQSVNGTESSEKGSDPFPSLSCLLLGANNIGD 333
Query: 225 LGDLDPLSTLPKLRTLSLMHNPVANK---NHYRAYVAFKMPELRLLDFRKIKQKERDEA 392
L +D L+ P+L + L NP+++ R + ++ ++++L+ +++ +E+ ++
Sbjct: 334 LASVDALNGFPQLVDIRLSENPISDPVRGGVPRFVLVARLTKVQVLNGSEVRAREKKDS 392
>At3g17920.1 68416.m02282 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 962
Score = 38.3 bits (85), Expect = 0.005
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Frame = +3
Query: 9 IPQIENLGATLDQFDTIDFSD--NDIRKLD-GFPLLKRLKCIL----LNNNRIVRIGENL 167
+P +E+L + ++F +D N ++ LD GF L+++ + NN + + +
Sbjct: 190 LPAVESLDLSRNKFAKVDNLRRCNKLKHLDLGFNQLRKISHLSEVGKFRNNALTTL-RGI 248
Query: 168 EHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVA--FKMPE 341
E+ + +LE + ++ N IS+ +L+ L +L L L L NP+ YRA+V +P
Sbjct: 249 EN-LKSLEGLDVSFNLISDFSELEFLGSLSFLTDLWLEGNPICCARWYRAHVLSYVYLPN 307
Query: 342 LRLLDFRKIKQKERDEANTLFKSRKGK 422
LD + I +E + + RK +
Sbjct: 308 DLKLDGKHIGNREFWKRQVVVTRRKSQ 334
>At1g47890.1 68414.m05333 disease resistance family protein contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1019
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +3
Query: 48 FDTIDFSDNDIR-KL-DGFPLLKRLKCILLNNNRIV-RIGENLEHYIPNLESVILTNNNI 218
+ ID S N + K+ D LLK L+ + +++N I +L + + NLES+ ++ NNI
Sbjct: 833 YTAIDLSGNQLHGKIPDSIGLLKELRILNMSSNGFTGHIPSSLAN-LKNLESLDISQNNI 891
Query: 219 SELGDLDP-LSTLPKLRTLSLMHN 287
S G++ P L TL L +++ HN
Sbjct: 892 S--GEIPPELGTLSSLAWINVSHN 913
>At1g78230.1 68414.m09116 leucine-rich repeat family protein
Length = 676
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 57 IDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDL 236
++ S N I ++G L RL+ + L+ NRI RIG+ L + ++ + L N IS ++
Sbjct: 473 LNLSKNKISVIEGLRDLTRLRVLDLSYNRISRIGQGLSN-CTLIKELYLAGNKIS---NV 528
Query: 237 DPLSTLPKLRTLSLMHNPVA 296
+ L L KL L L N +A
Sbjct: 529 EGLHRLLKLIVLDLSFNKIA 548
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +3
Query: 66 SDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPL 245
+DN+I + LLK L ++L+ N I IG++L + NL + L++ I +G L
Sbjct: 115 NDNEISSICKLDLLKDLNSLVLSRNPISEIGDSLSK-LKNLSKISLSDCRIKAIG--SSL 171
Query: 246 STLPKLRTLSLMHNPV 293
+ L+ L L +N +
Sbjct: 172 KSCSDLKELRLANNEI 187
>At1g48540.2 68414.m05428 leucine-rich repeat family protein
Length = 1051
Score = 36.3 bits (80), Expect = 0.021
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Frame = +3
Query: 6 KIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLK-RLKCILLNNNRIVRIGENLEHYIP 182
K +++NL + +D N +R + + L ++L NN + + +E+ +
Sbjct: 202 KFVKVDNL-RRCTKLKHLDLGFNHLRTVSYLSQVSCHLVKLVLRNNALTTL-RGIEN-LK 258
Query: 183 NLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYV--AFKMPELRLLD 356
+L+ + ++ N IS +L+ L +L +L+ L L NPV YRA+V +P+ LD
Sbjct: 259 SLQGLDVSYNIISNFSELEFLWSLSQLKELWLEGNPVCCARWYRAHVFSYVALPDELKLD 318
Query: 357 FRKIKQKE 380
++I +E
Sbjct: 319 GKQIGTRE 326
>At1g48540.1 68414.m05427 leucine-rich repeat family protein
Length = 1063
Score = 36.3 bits (80), Expect = 0.021
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Frame = +3
Query: 6 KIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLK-RLKCILLNNNRIVRIGENLEHYIP 182
K +++NL + +D N +R + + L ++L NN + + +E+ +
Sbjct: 202 KFVKVDNL-RRCTKLKHLDLGFNHLRTVSYLSQVSCHLVKLVLRNNALTTL-RGIEN-LK 258
Query: 183 NLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYV--AFKMPELRLLD 356
+L+ + ++ N IS +L+ L +L +L+ L L NPV YRA+V +P+ LD
Sbjct: 259 SLQGLDVSYNIISNFSELEFLWSLSQLKELWLEGNPVCCARWYRAHVFSYVALPDELKLD 318
Query: 357 FRKIKQKE 380
++I +E
Sbjct: 319 GKQIGTRE 326
>At1g72180.1 68414.m08346 leucine-rich repeat transmembrane protein
kinase, putative similar to GI:3641252 from [Malus x
domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))
Length = 977
Score = 34.3 bits (75), Expect = 0.087
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +3
Query: 57 IDFSDNDI--RKLDGFPLLKRLKCILLNNNRIV-RIGENLEHYIPNLESVILTNNNIS-- 221
ID SDN++ L L ++L NNR +I L + N+E + L+NNN+S
Sbjct: 415 IDLSDNELTGEVSPQIGLSTELSQLILQNNRFSGKIPRELGR-LTNIERIYLSNNNLSGE 473
Query: 222 ---ELGDLDPLSTL 254
E+GDL LS+L
Sbjct: 474 IPMEVGDLKELSSL 487
>At2g33080.1 68415.m04056 leucine-rich repeat family protein
contains leucine rich-repeat domain Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 740
Score = 33.5 bits (73), Expect = 0.15
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = +3
Query: 39 LDQFDTIDFSDNDIRKL--DGFPLLKRLKCILLNNNRIV-RIGENLEHYIPNLESVILTN 209
L+ + IDFS N + LLK L + L+NN I +L + LES+ L+
Sbjct: 601 LNSYSAIDFSGNRLEGQIPKSIGLLKELIALNLSNNAFTCHIPLSLAN-ATELESLDLSR 659
Query: 210 NNISELGDL-DPLSTLPKLRTLSLMHNPVANKNH 308
N +S G + + L TL L +++ HN + +NH
Sbjct: 660 NQLS--GTIPNGLKTLSFLAYINVSHNKLKGENH 691
>At3g23010.1 68416.m02901 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; contains similarity to
Cf-2.2 [Lycopersicon pimpinellifolium]
gi|1184077|gb|AAC15780
Length = 595
Score = 30.7 bits (66), Expect = 1.1
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +3
Query: 48 FDTIDFSDNDIR-KLDG-FPLLKRLKCILLNNNRIV-RIGENLEHYIPNLESVILTNNNI 218
F+ IDFS N + G LL L+ + L+ N I +L + I NLES+ L+ NN+
Sbjct: 430 FNAIDFSGNRFSGHIPGSIGLLSELRLLNLSGNAFTGNIPPSLAN-ITNLESLDLSRNNL 488
Query: 219 SELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYV 323
S G++ P+S L LS + N + NH +
Sbjct: 489 S--GEI-PIS----LGKLSFLSNTNFSYNHLEGLI 516
>At4g24490.1 68417.m03510 geranylgeranyl transferase alpha
subunit-related / RAB geranylgeranyltransferase alpha
subunit-related low similarity to SP|Q08602 [Rattus
norvegicus]
Length = 683
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 57 IDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIG--ENLEHYIPNLESVILTNNNISE 224
+D S N++ +G ++ L C+ L++NRI ++L H + L+ + +++N+I +
Sbjct: 543 LDLSHNELHSTEGLEAMQLLSCLNLSHNRIRSFSALDSLRH-VKQLKVLDVSHNHIGK 599
>At1g17440.2 68414.m02133 transcription initiation factor IID
(TFIID) subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam
profile PF03847: Transcription initiation factor TFIID
subunit A
Length = 683
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Frame = +3
Query: 420 KEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEIHKIREAI-----------KNASSLQEV 566
K+I + K +PG + D + T P ++HK R A+ NAS+ +E
Sbjct: 584 KDILLHLEKNLHLTIPGFSSEDKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKET 643
Query: 567 ERLTRMLQSGQ----IPGQKPLQPVTQTNGQH 650
R + +G P Q Q V+QT+G H
Sbjct: 644 MRQAMVNPNGPNHLLRPSQSSEQLVSQTSGPH 675
>At1g17440.1 68414.m02132 transcription initiation factor IID
(TFIID) subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam
profile PF03847: Transcription initiation factor TFIID
subunit A
Length = 683
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Frame = +3
Query: 420 KEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEIHKIREAI-----------KNASSLQEV 566
K+I + K +PG + D + T P ++HK R A+ NAS+ +E
Sbjct: 584 KDILLHLEKNLHLTIPGFSSEDKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKET 643
Query: 567 ERLTRMLQSGQ----IPGQKPLQPVTQTNGQH 650
R + +G P Q Q V+QT+G H
Sbjct: 644 MRQAMVNPNGPNHLLRPSQSSEQLVSQTSGPH 675
>At5g20690.1 68418.m02457 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase PRK1,
tomato, PIR:T07865
Length = 659
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 87 LDGFPLLKRLKCILLNNNRIVRIGENLEHY--IPNLESVILTNNNIS-ELGDLDPLSTLP 257
+D L LK I L+NN + L H+ + L+S++L+NN+ S E+ D D +
Sbjct: 89 VDDLKDLPNLKTIRLDNNLL---SGPLPHFFKLRGLKSLMLSNNSFSGEIRD-DFFKDMS 144
Query: 258 KLRTLSLMHN 287
KL+ L L HN
Sbjct: 145 KLKRLFLDHN 154
>At4g37810.1 68417.m05350 expressed protein
Length = 128
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 169 SKFSPILTILLLFNRIHFNLFSSGKP 92
S S L ILL+ N HF+L ++G+P
Sbjct: 5 SNMSSFLLILLILNSTHFSLMANGRP 30
>At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 328
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 495 TNLTPQEIHKIREAIKNASSLQEVERLTRMLQSGQIPGQKPLQPVTQTNGQHEDE-EMDT 671
T +TP + K + + L V + P +KPL+ V T+ + E+E E +
Sbjct: 35 TLVTPSTVKKSSDVASTSKKLSGVASPAKKPSGVTSPVKKPLEAVASTSSEEEEEDEPSS 94
Query: 672 DQANG 686
D +G
Sbjct: 95 DSESG 99
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 285 NPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEANTLFKSRKGKEIQRE 437
N A+K V+ + EL D +K K+KE+DE+ T K +K K+ +++
Sbjct: 150 NKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQ 200
>At2g46490.1 68415.m05786 expressed protein (APS2) identical to cDNA
Aps2, partial cds GI:4519894
Length = 134
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 130 NRIHFNLFSSGKPSSFLMSLSEKSIVSN*SSVAP 29
N + NLFSS SS L SLS S +SN +S P
Sbjct: 75 NIMAMNLFSSSSSSSNLQSLSSSSSLSNLASDLP 108
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 249 TLPKLRTLSLMHNPVANKNHYRAYV-AFKMPELRLLDFRKIKQKERDEANTLFKS--RKG 419
T+PK + + P ++ A A K+ E RLL+ + K+KE +EA + K +
Sbjct: 100 TMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEESRRKEKEEEEAKQMKKQLLEEK 159
Query: 420 KEIQREIAKKAK 455
+ + R++ ++AK
Sbjct: 160 EALIRKLQEEAK 171
>At4g27890.1 68417.m04003 nuclear movement family protein contains
Pfam profile: PF03593 nuclear movement protein
Length = 293
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +3
Query: 372 QKERDEANTLFKSRKGKEIQREIAKKA--KTFVPGGNMPDPKVTNLTPQEIHKIREAIKN 545
+K+ E + K+ RE KK K V + PK +L P E+ K +E
Sbjct: 45 KKDTAEKEIVAAVMAAKQRLREAEKKKLEKESVKSMEVEKPKKDSLKPTELEKPKEESLM 104
Query: 546 ASSLQEVERLTRMLQSGQIPGQK 614
A+ E+E+ +SG I K
Sbjct: 105 ATDPMEIEKPKEEKESGPIVPNK 127
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 RLKCILLNNNRIVRIGENLEHYIPNLESVILT-NNNISELGDLDPLSTL 254
+L+ +LL +NR+ +I ++P L + L+ N N+ EL PL +L
Sbjct: 528 KLETLLLRDNRLRKISREFLSHVPILMVLDLSLNPNLIELPSFSPLYSL 576
>At4g14605.1 68417.m02247 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 444
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -3
Query: 201 KSQTLNLVYNVPNSLLSSRSCYYS-IEYIS-TFLAVENRQAF*CRCPRSLSYQIDRA*HP 28
K+Q ++ P L SR S +E++S T L E RCP +SY ++ P
Sbjct: 282 KNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRP 341
Query: 27 DFRFVESYN 1
+ S N
Sbjct: 342 TMEYFRSLN 350
>At4g04220.1 68417.m00598 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-2A [Lycopersicon
pimpinellifolium] gi|3894389|gb|AAC78594
Length = 811
Score = 28.7 bits (61), Expect = 4.3
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Frame = +3
Query: 39 LDQFDTIDFSDNDIRKL--DGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNN 212
L + TID +N + D L L + L+ N++ + H + NLE++ L NN
Sbjct: 225 LTKLKTIDLQNNFLSSKIPDDIGNLVNLSTLSLSMNKLSGGIPSSIHNLKNLETLQLENN 284
Query: 213 NISELGDLDP--LSTLPKLRTLSLM-HNPVANKNHYRAYVAFKMPELRL 350
N G++ L L KL+ L L +N + N+ + FK+ L L
Sbjct: 285 N-GLSGEIPAAWLFGLQKLKVLRLEGNNKLQWNNNGYVFPQFKLTHLSL 332
>At2g32680.1 68415.m03995 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 890
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 183 NLESVILTNNNISELGDL-DPLSTLPKLRTLSLMHNPVANK 302
NLE V L NNN+ G + D L LRTL + HN + K
Sbjct: 529 NLELVYLRNNNLE--GSIPDALCDGASLRTLDVSHNRLTGK 567
>At1g72460.1 68414.m08379 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00560 leucine
rich repeat (5 copies), PF00069 eukaryotic protein
kinase domain
Length = 644
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 39 LDQFDTIDFSDNDIR-KLDGFPLLKRLKCILLNNNRIV-RIGENLEHYIPNLESVILTNN 212
L TI +N + F L LK + ++ NR I + + +L+ L+NN
Sbjct: 89 LPSLRTISIMNNSFSGDIPEFNRLTALKSLYISGNRFSGNIPSDYFETMVSLKKAWLSNN 148
Query: 213 NISELGDLDPLSTLPKLRTLSLMHN 287
+ S L + +TLP L L L +N
Sbjct: 149 HFSGLIPISLATTLPNLIELRLENN 173
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 231 DLDPLSTLPKLRTLSLMHN 287
D+ PL LP LRT+S+M+N
Sbjct: 82 DVAPLKDLPSLRTISIMNN 100
>At4g36080.1 68417.m05136 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF00454: Phosphatidylinositol 3-
and 4-kinase, PF02259: FAT domain, PF02260: FATC domain
Length = 3839
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +3
Query: 51 DTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELG 230
+ +D ++ND R+ +++ L L N+N + + +N+++ + L S T + +SEL
Sbjct: 1183 NNVDEANNDARRQSFQDVVEYLATELFNSNASITVRKNVQNCLALLAS--RTGSEVSEL- 1239
Query: 231 DLDPL 245
L+PL
Sbjct: 1240 -LEPL 1243
>At3g42880.1 68416.m04495 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase PRK1,
Lycopersicon esculentum, PIR:T07865
Length = 633
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +3
Query: 105 LKRLKCILLNNNRIVRIGENLEHY-IPNLESVILTNNNIS-ELGDLDPLSTLPKLRTLSL 278
L L+ I L+NN + G + +P L+S++L+NN+ S E+ D D P+L+ + L
Sbjct: 90 LPNLRTIRLDNNLLS--GPLPPFFKLPGLKSLLLSNNSFSGEIAD-DFFKETPQLKRVFL 146
Query: 279 MHNPVANK 302
+N ++ K
Sbjct: 147 DNNRLSGK 154
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 332 FECHICPIMVFV-GNWIVHE**CSQLW*CT 246
F C C + V G+W HE C +LW CT
Sbjct: 265 FSCGKCGKALAVKGDWRTHEKNCGKLWYCT 294
>At4g37920.1 68417.m05362 expressed protein
Length = 673
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 450 AKTFVPGGN--MPDPKVTNLTPQEIHKIREAIKNASSLQEVERLTRMLQSGQIPGQKPLQ 623
A F PG + DPK TP+E+HK + + +A L + E T + ++ Q+ +Q
Sbjct: 577 ATAFSPGDDHEAKDPKALYTTPKELHKWIKIMLDAYHLNKEE--TDIKEAKQMSQPIVIQ 634
Query: 624 PVTQTNGQHEDEEMD 668
+ EDE +D
Sbjct: 635 RLFILKDTIEDEYLD 649
>At4g24760.1 68417.m03545 expressed protein
Length = 365
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 168 EHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPV 293
E+Y E++IL ++ +D + LP+LR S++H+P+
Sbjct: 132 ENYGAKQENIILYGQSVGSGPTVDLAARLPRLRA-SILHSPI 172
>At3g20190.1 68416.m02559 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAA33715
[Petunia integrifolia]
Length = 679
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 231 DLDPLSTLPKLRTLSLMHN 287
DL+PL+ + LRTLS M+N
Sbjct: 111 DLEPLAAIKNLRTLSFMNN 129
>At1g74180.1 68414.m08591 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 951
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +3
Query: 105 LKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSL 278
L +L+ + L++N++ + + +LE + L++NN L+PL+ L KL+ L
Sbjct: 258 LNKLRVLDLSSNQLSGNLPASFNSLESLEYLSLSDNNFEGFFSLNPLANLTKLKVFRL 315
>At1g70940.1 68414.m08184 auxin transport protein, putative (PIN3)
similar to auxin transport protein [Arabidopsis
thaliana] gi|5817301|gb|AAD52695
Length = 640
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +2
Query: 509 SRNP*DPRSNQECIIPTGGRTS-----DKNVAVWSDS 604
++NP D +NQ+ +PTGG+++ + ++ VWS +
Sbjct: 328 NKNPKDVNTNQQTTLPTGGKSNSHDAKELHMFVWSSN 364
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 332 FECHICPIMVFV-GNWIVHE**CSQLW*CT 246
F C +C V G+W HE C +LW C+
Sbjct: 262 FACRMCGKAFAVKGDWRTHEKNCGKLWYCS 291
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 332 FECHICPIMVFV-GNWIVHE**CSQLW*C 249
F C +C ++ V G+W HE C + W C
Sbjct: 229 FSCRLCGKLLAVKGDWRTHEKNCGKRWVC 257
>At1g33950.1 68414.m04208 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana), NTGP4
GB:AAD09518 (Nicotiana tabacum); contains Pfam profile:
PF00735 cell division protein (members of this family
bind GTP)
Length = 311
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +1
Query: 526 SEKQSRMHHPYRRSNV*QECCSLVRFQGKNLYSP*HKQMVNMKMRKWTRIKQTDSS*VNK 705
SEK + H N +EC + ++ Q LY KQM +K + ++K
Sbjct: 225 SEKLRKHHEELESKNYSEECAAEMKNQSLILYKENLKQMSEQLEKKLKDAAEAQEKALSK 284
Query: 706 IHSLNMRIKLAV 741
+ N + LA+
Sbjct: 285 MTQENNELNLAL 296
>At1g02290.1 68414.m00171 expressed protein
Length = 443
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 342 LRLLDFRKIKQKERDEANTLFKS-RKGKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEI 518
L+LLD ++ KE D A FK+ K ++R K+ TF G+ + +T + +
Sbjct: 178 LKLLDLNRVPSKEMDSATCRFKTPNVVKPVERN-RSKSLTFPRSGSSKNSLKIKITKEGV 236
Query: 519 HK 524
+
Sbjct: 237 FR 238
>At4g33330.1 68417.m04740 glycogenin glucosyltransferase
(glycogenin)-related similar to glycogenin
glucosyltransferase (glycogenin-1) (EC 2.4.1.186) from
Homo sapiens [SP|P46976], Mus musculus [SP|Q9R062],
Oryctolagus cuniculus [GI:165513]; contains Pfam profile
PF01501: Glycosyl transferase family 8
Length = 593
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 258 KLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFRKI 368
KLR + + NP+A K+ Y Y K +L D+ K+
Sbjct: 352 KLRRIIRIRNPLAEKDSYNEYNYSKFRLWQLTDYDKV 388
>At4g28490.1 68417.m04076 leucine-rich repeat transmembrane protein
kinase, putative
Length = 999
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 174 YIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLL 353
++P+L S+ L NN+I+ D T L +L L N + + F +P L+ L
Sbjct: 87 HLPSLHSLSLYNNSINGSLSADDFDTCHNLISLDLSENLLVGS--IPKSLPFNLPNLKFL 144
Query: 354 D 356
+
Sbjct: 145 E 145
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 27.5 bits (58), Expect = 9.9
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Frame = +3
Query: 144 IVRIGENLEHYIPNLESVILTNNNISELGDL-------DPLSTLPKLRTLSLMHNPVANK 302
+++ GE E +LE + N + + +L + L T ++ T L + V+ K
Sbjct: 1 MIQTGEEDEEKATSLEVEFASGNGVDDEEELRLQWATVERLPTFKRVTTALLARDEVSGK 60
Query: 303 NHYRAYVAFKMPELRLLDFRKIKQKERDEANTLFKSRK 416
+ E RLL +KQ E D L K RK
Sbjct: 61 GRVIDVTRLEGAERRLLIEMLVKQIEDDNLRLLRKIRK 98
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 57 IDFSDNDIRKLDGFPL--LKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNIS 221
+D S N++ F + LK+L+ ++L NN+++ + IPNL+ + L N +S
Sbjct: 121 LDLSFNELSGDIPFSISKLKQLEQLILKNNQLIGPIPSTLSQIPNLKILDLAQNKLS 177
>At2g14960.1 68415.m01701 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 590
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 237 PNHQVLRYCCLLKSQTLNLVY 175
P+H+ L CCL ++LN VY
Sbjct: 492 PSHETLTRCCLGMEESLNSVY 512
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,925,360
Number of Sequences: 28952
Number of extensions: 337936
Number of successful extensions: 1070
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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