Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p12
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical pr... 94 8e-20
AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical ... 94 1e-19
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 54 1e-07
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z74038-3|CAA98498.2| 89|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z81477-4|CAB03925.2| 279|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical p... 29 3.2
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 28 5.7
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 28 5.7
Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical pr... 28 7.5
U88169-3|AAK68396.1| 345|Caenorhabditis elegans Hypothetical pr... 28 7.5
U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical pr... 28 7.5
AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidas... 28 7.5
AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical ... 28 7.5
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 23 9.8
>Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical
protein C31E10.7 protein.
Length = 134
Score = 105 bits (252), Expect = 3e-23
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = +1
Query: 211 KNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGHS 390
K +TL E+ +H KS W++I N V+DVTKFL+EHPGG + LLE AG DGT+AFEDVGHS
Sbjct: 5 KQITLKEIAEHNTNKSAWLVIGNKVFDVTKFLDEHPGGCEVLLEQAGSDGTEAFEDVGHS 64
Query: 391 DDARELLKKYKIGTLPPGER 450
DAR + +Y IG + ER
Sbjct: 65 TDARHMKDEYLIGEVVASER 84
>Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical
protein D2023.1b protein.
Length = 103
Score = 94.3 bits (224), Expect = 8e-20
Identities = 45/78 (57%), Positives = 53/78 (67%)
Frame = +1
Query: 217 LTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGHSDD 396
+T EV H E WII+ N VYDVTKF++ HPGG + LLE AG D T AFE VGHS
Sbjct: 6 ITRSEVNMHCSEDDCWIIVGNYVYDVTKFVDLHPGGPEILLEFAGGDATDAFESVGHSMC 65
Query: 397 ARELLKKYKIGTLPPGER 450
AR +L K+KIG+LP ER
Sbjct: 66 ARMMLTKFKIGSLPEDER 83
>AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical
protein W02D3.1 protein.
Length = 141
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Frame = +1
Query: 217 LTLDEVKKHKDE---KSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGH 387
++LDEV KH E +S WI+I VYDVTKFL EHPGG + + ++AGKD T F DVGH
Sbjct: 7 ISLDEVSKHNWEDADQSCWIVISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFLDVGH 66
Query: 388 SDDARELLKKYKIGTLPPGERCKIITDCSK 477
S DA E+ +Y IG LP + K+ T +K
Sbjct: 67 SKDAIEMANEYLIGQLPESDVPKVETAAAK 96
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 199 RKMSKNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFED 378
+++S + E+ KH + W+ + VYDVTK+L+ HPGG LL AG+D T F
Sbjct: 15 KRVSGGVDHVELMKHNTKDDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQ 74
Query: 379 VGHSDDARELLKKYKIG 429
+ +LK +G
Sbjct: 75 YHAWVNYESMLKACVVG 91
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 199 RKMSKNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFED 378
+++S + E+ KH + W+ + VYDVTK+L+ HPGG LL AG+D T F
Sbjct: 51 KRVSGGVDHVELMKHNTKDDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQ 110
Query: 379 VGHSDDARELLKKYKIG 429
+ +LK +G
Sbjct: 111 YHAWVNYESMLKACVVG 127
>Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical
protein H13N06.4a protein.
Length = 541
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 226 DEVKKH-KDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGK--DGTQAFEDVGHSDD 396
+EVKKH KD +W+ + VYDVT F+ HPGG D +L AG D A + +
Sbjct: 85 EEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGG-DKILLAAGAAVDPFWALYSQHKTKE 143
Query: 397 ARELLKKYKIGTLPPGERCKIITD 468
E+L+ Y+IG L + K + D
Sbjct: 144 VLEILEGYRIGKLDVKDVPKPVAD 167
>Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical
protein H13N06.4b protein.
Length = 178
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 226 DEVKKH-KDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGK--DGTQAFEDVGHSDD 396
+EVKKH KD +W+ + VYDVT F+ HPGG D +L AG D A + +
Sbjct: 85 EEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGG-DKILLAAGAAVDPFWALYSQHKTKE 143
Query: 397 ARELLKKYKIGTL 435
E+L+ Y+IG L
Sbjct: 144 VLEILEGYRIGKL 156
>Z74038-3|CAA98498.2| 89|Caenorhabditis elegans Hypothetical
protein F58B4.2 protein.
Length = 89
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +1
Query: 211 KNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGT 363
K T +V++H +W++ + VY++T + +HPGG ++L AGKD T
Sbjct: 10 KEYTRSQVEQHCTHDDLWLLFRDKVYNMTPYFNQHPGGL-AILRYAGKDVT 59
>Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical
protein C25A1.5 protein.
Length = 316
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Frame = +1
Query: 247 DEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKD------GTQAFEDV--GHSDDAR 402
++K + + + YD+ F +HPGGA L +AG++ G + V HS+ A
Sbjct: 7 EKKPLLVQLDGQYYDIADFAPKHPGGAKVLNRLAGEEIGEFIRGEKRIMGVRHEHSEAAY 66
Query: 403 ELLKKYKIGTLPPGE 447
+L++Y + + G+
Sbjct: 67 NMLERYNVNAIQKGD 81
>Z81477-4|CAB03925.2| 279|Caenorhabditis elegans Hypothetical
protein C27C7.5 protein.
Length = 279
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 482 FNFEQSVMILHLSPGGNVPILYFFNNSRASSLCPTSSKAWVPS 354
F+F + L P N+ + NNS A + CPTS PS
Sbjct: 66 FDFGDVSTVEKLDPEENLKVAMKINNSTADTTCPTSISGSFPS 108
>Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical
protein T19B10.3 protein.
Length = 653
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 319 GGADSLLEVAGKDGTQAFEDVGHSDDARELLKKYKI 426
G A+SLL+ +G D G +DDA+E+ +K+
Sbjct: 233 GSAESLLKCGTVEGVFPTVDFGPTDDAKEIENNFKL 268
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 232 VKKHKDEKSVWIIIHNDVYDVTKFLEEHP 318
V+ HK WI HN +Y + EEHP
Sbjct: 470 VQIHKARNDYWINTHNAIYPLKITDEEHP 498
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 232 VKKHKDEKSVWIIIHNDVYDVTKFLEEHP 318
V+ HK WI HN +Y + EEHP
Sbjct: 474 VQIHKARNDYWINTHNAIYPLKITDEEHP 502
>Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -1
Query: 451 IFHLEATFQFCISSTTLEHHHYVPRLQKPGFHPSLPLLTMNQLHLDA--PPKT*SRRKHH 278
I L AT QF +T H +VP P HP+ PL A K SR+ HH
Sbjct: 25 IIFLFATSQF---KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQPHH 81
>U88169-3|AAK68396.1| 345|Caenorhabditis elegans Hypothetical
protein T03F1.6b protein.
Length = 345
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 601 DYQDVNEYGTILERFEILLC 660
D++DV +YGT +E+ E+ +C
Sbjct: 86 DWEDVIKYGTCIEKLELNIC 105
>U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical
protein T03F1.6a protein.
Length = 342
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 601 DYQDVNEYGTILERFEILLC 660
D++DV +YGT +E+ E+ +C
Sbjct: 86 DWEDVIKYGTCIEKLELNIC 105
>AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidase
protein.
Length = 591
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -1
Query: 451 IFHLEATFQFCISSTTLEHHHYVPRLQKPGFHPSLPLLTMNQLHLDA--PPKT*SRRKHH 278
I L AT QF +T H +VP P HP+ PL A K SR+ HH
Sbjct: 25 IIFLFATSQF---KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQPHH 81
>AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -1
Query: 451 IFHLEATFQFCISSTTLEHHHYVPRLQKPGFHPSLPLLTMNQLHLDA--PPKT*SRRKHH 278
I L AT QF +T H +VP P HP+ PL A K SR+ HH
Sbjct: 25 IIFLFATSQF---KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQPHH 81
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 27.5 bits (58), Expect = 9.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1
Query: 400 EHHHYVPRLQKP 365
+HHHYVP++ KP
Sbjct: 1551 DHHHYVPQIAKP 1562
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 400 EHHHYVPRLQKP 365
+ HHYVP + KP
Sbjct: 988 QEHHYVPLIAKP 999
Score = 22.6 bits (46), Expect(2) = 9.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 412 STTLEHHHYVP 380
S L HHHY+P
Sbjct: 940 SNDLSHHHYMP 950
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 23.0 bits (47), Expect(2) = 9.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 400 EHHHYVPRLQKP 365
+ HHYVP + KP
Sbjct: 988 QEHHYVPLIAKP 999
Score = 22.6 bits (46), Expect(2) = 9.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 412 STTLEHHHYVP 380
S L HHHY+P
Sbjct: 940 SNDLSHHHYMP 950
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,737,231
Number of Sequences: 27780
Number of extensions: 294684
Number of successful extensions: 874
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -