BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11p08 (526 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 149 2e-36 AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 149 2e-36 X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 141 6e-34 BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 62 6e-10 AY051415-1|AAK92839.1| 382|Drosophila melanogaster GH09360p pro... 30 1.7 AE014297-77|AAF52133.1| 382|Drosophila melanogaster CG9855-PA p... 30 1.7 AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-P... 29 2.9 >AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p protein. Length = 252 Score = 149 bits (361), Expect = 2e-36 Identities = 78/135 (57%), Positives = 94/135 (69%) Frame = +2 Query: 122 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 301 PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y E Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63 Query: 302 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNG 481 Y E+ EI+L R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNG Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123 Query: 482 VFVXLNKATVNMLRI 526 VF+ LNKAT+NMLRI Sbjct: 124 VFIKLNKATINMLRI 138 >AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA protein. Length = 252 Score = 149 bits (361), Expect = 2e-36 Identities = 78/135 (57%), Positives = 94/135 (69%) Frame = +2 Query: 122 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 301 PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y E Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63 Query: 302 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNG 481 Y E+ EI+L R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNG Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123 Query: 482 VFVXLNKATVNMLRI 526 VF+ LNKAT+NMLRI Sbjct: 124 VFIKLNKATINMLRI 138 >X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal protein protein. Length = 239 Score = 141 bits (341), Expect = 6e-34 Identities = 73/125 (58%), Positives = 88/125 (70%) Frame = +2 Query: 152 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIR 331 LPAVPES LK + LK+ + +K+E RAE+Y EY E+ EI+ Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 60 Query: 332 LARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVXLNKATV 511 L R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNGVF+ LNKAT+ Sbjct: 61 LRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATI 120 Query: 512 NMLRI 526 NMLRI Sbjct: 121 NMLRI 125 >BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p protein. Length = 227 Score = 61.7 bits (143), Expect = 6e-10 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%) Frame = -1 Query: 526 DT*HIHSSLIQXYKHTIVYLAQSKQLQNFTDLR*NLVDTTDSDDKCQFGFPGNVVVATIA 347 D H+ L+Q +HT+V L Q++QLQN DL +LVDT D+DDK QFG G+V + + Sbjct: 59 DAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLGSHLVDTADTDDKGQFGLGGHVELVALL 118 Query: 346 CLSG*SDFITF-LDAVFLDVL 287 + D F LD + L +L Sbjct: 119 GQATQLDLALFRLDVLILVLL 139 >AY051415-1|AAK92839.1| 382|Drosophila melanogaster GH09360p protein. Length = 382 Score = 30.3 bits (65), Expect = 1.7 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +2 Query: 218 LQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYV-PGEAKLAF 394 L++ LK++ +KKR I E+ ++ + + + ARQ R V P E + A Sbjct: 310 LKIYLKQKQYGRRKKRRIVDYTEENIRNFMHRNNNSAAAARQERLPEQRPVPPAERRDAV 369 Query: 395 VIRIRG 412 + R RG Sbjct: 370 ITRQRG 375 >AE014297-77|AAF52133.1| 382|Drosophila melanogaster CG9855-PA protein. Length = 382 Score = 30.3 bits (65), Expect = 1.7 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +2 Query: 218 LQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYV-PGEAKLAF 394 L++ LK++ +KKR I E+ ++ + + + ARQ R V P E + A Sbjct: 310 LKIYLKQKQYGRRKKRRIVDYTEENIRNFMHRNNNSAAAARQERLPEQRPVPPAERRDAV 369 Query: 395 VIRIRG 412 + R RG Sbjct: 370 ITRQRG 375 >AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-PA protein. Length = 448 Score = 29.5 bits (63), Expect = 2.9 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +2 Query: 221 QVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRL 334 ++ + + ++K +EI++ YV+EYR ++ +E RL Sbjct: 367 ELRILEQKKLLQKHKEIYEERMTYVQEYRAQKEEEQRL 404 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,392,157 Number of Sequences: 53049 Number of extensions: 359775 Number of successful extensions: 997 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 977 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 994 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1949978112 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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