Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11p07
         (643 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    39   5e-05
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    34   0.001
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    30   0.017
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   3.3  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 38.7 bits (86), Expect = 5e-05
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +1

Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHE-PIPYVC-HCGVAYYKSCDLKDHKKL 450
           K  +CP+C+K+F  +  LK H  +H    PY C HC   + +  +L+ H ++
Sbjct: 8   KPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRV 59


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +1

Query: 307 HQCPDCNKKFVHESTLKAHSFVHE-PIPYVCH-CGVAYYKSCDLKDHKK 447
           H+C  C+K F+    L  H   H    PYVC  CG  +  S  LK H +
Sbjct: 176 HKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTR 224



 Score = 30.7 bits (66), Expect = 0.013
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 301 KVHQCPDCNKKFVHESTLKAHSFVH-EPIPYVCH-CGVAYYKSCDLKDHKKL 450
           K +QC  C+K F  +  L  H  +H +  PY C  C  A+  S  L  H ++
Sbjct: 118 KPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRI 169



 Score = 29.1 bits (62), Expect = 0.038
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +1

Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHE-PIPYVCH-CGVAYYKSCDLKDHK 444
           K + C  C K F     LK H+  H    PY C  CG ++  +  LK H+
Sbjct: 202 KPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQ 251



 Score = 25.0 bits (52), Expect = 0.62
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +1

Query: 301 KVHQCPDCNKKF----VHESTLKAHSFVHEPIPYVCH-CGVAYYKSCDLKDH 441
           K +QC  C K F    +++S L++H    E  PY C+ CG  +     L  H
Sbjct: 60  KTYQCLLCQKAFDQKNLYQSHLRSHGKEGED-PYRCNICGKTFAVPARLTRH 110



 Score = 25.0 bits (52), Expect = 0.62
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = +1

Query: 307 HQCPDCNKKFVHESTLKAHSFVHE-PIPYVCH-CGVAYYKSCDLKDHKK 447
           ++C  C + F H   L  H  +H    P+ C  C   + +S  L  H +
Sbjct: 148 YKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMR 196



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 301 KVHQCPDCNKKFVHESTLKAHSFVH 375
           K + C  C K F +   LK H   H
Sbjct: 230 KPYTCDICGKSFGYNHVLKLHQVAH 254


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCH-CGVAYYKSCDLKDH 441
           K   C  C K +V    LK H   H  +P  CH CG A+ +   L+ H
Sbjct: 15  KSFSCKYCEKVYVSLGALKMHIRTH-TLPCKCHLCGKAFSRPWLLQGH 61


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 101 KAYPLSRKQWHN 136
           K YPL   QWHN
Sbjct: 68  KNYPLDVDQWHN 79


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 504 QNENLQTENEICANQEIK 557
           +N+N Q +N +CA  E+K
Sbjct: 28  RNKNPQPKNAVCALNELK 45


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -1

Query: 424 NSCSMQRRSDRHKG*VHERTSAPSTCSHERIFYYNRD 314
           +SC  +    RH+     R     +CS +R   Y +D
Sbjct: 228 SSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKD 264


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 581 FLPRIFLFFNFLICTDFIF 525
           F P +F FFN    + ++F
Sbjct: 422 FFPIVFAFFNLAYWSTYLF 440


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 581 FLPRIFLFFNFLICTDFIF 525
           F P +F FFN    + ++F
Sbjct: 422 FFPIVFAFFNLAYWSTYLF 440


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 101 KAYPLSRKQWHN 136
           K YP    QWHN
Sbjct: 67  KNYPFDVDQWHN 78


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 105 HIRCRENNGTITPRS*GSVRSC 170
           H +CR  N ++TP +    + C
Sbjct: 433 HFQCRYPNASVTPYNKNYTKFC 454


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,245
Number of Sequences: 438
Number of extensions: 3033
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)