Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o20
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...   133   2e-31
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...   133   2e-31
AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.    28   8.7  
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P...    28   8.7  

>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score =  133 bits (322), Expect = 2e-31
 Identities = 64/130 (49%), Positives = 81/130 (62%)
 Frame = +1

Query: 205 RQTPPMLKKILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIWL 384
           R + P LK +L+ DVQ++K FV     ++  KSLR HS+ LEISC GI W   W+ FIWL
Sbjct: 2   RTSSPALKYLLEKDVQVSKHFVVAVSNLSFFKSLRIHSRFLEISCDGIAWFVSWIAFIWL 61

Query: 385 FNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSFPSGHASRA 564
            +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSFPSGHASRA
Sbjct: 62  LSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSFPSGHASRA 121

Query: 565 VLISFILIYF 594
               F+L++F
Sbjct: 122 F---FVLLFF 128


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score =  133 bits (322), Expect = 2e-31
 Identities = 64/130 (49%), Positives = 81/130 (62%)
 Frame = +1

Query: 205 RQTPPMLKKILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIWL 384
           R + P LK +L+ DVQ++K FV     ++  KSLR HS+ LEISC GI W   W+ FIWL
Sbjct: 2   RTSSPALKYLLEKDVQVSKHFVVAVSNLSFFKSLRIHSRFLEISCDGIAWFVSWIAFIWL 61

Query: 385 FNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSFPSGHASRA 564
            +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSFPSGHASRA
Sbjct: 62  LSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSFPSGHASRA 121

Query: 565 VLISFILIYF 594
               F+L++F
Sbjct: 122 F---FVLLFF 128


>AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.
          Length = 990

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 288 NCSKVFTEPFSITRDIMSWH 347
           NCSKVF +P ++ R I ++H
Sbjct: 284 NCSKVFCDPSNLQRHIRAYH 303


>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 288 NCSKVFTEPFSITRDIMSWH 347
           NCSKVF +P ++ R I ++H
Sbjct: 402 NCSKVFCDPSNLQRHIRAYH 421


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,318,889
Number of Sequences: 53049
Number of extensions: 469098
Number of successful extensions: 947
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)