Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o19
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.18 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.18 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   6.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   6.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   6.6  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 345 YIQVPESSCS-FLLNINDPILFQSRHNPMNV 256
           Y+ +PE+  S FLL    P+  + +  PMNV
Sbjct: 562 YLCMPENQDSQFLLEYRGPVTMKGKSEPMNV 592


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 345 YIQVPESSCS-FLLNINDPILFQSRHNPMNV 256
           Y+ +PE+  S FLL    P+  + +  PMNV
Sbjct: 562 YLCMPENQDSQFLLEYRGPVTMKGKSEPMNV 592


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +1

Query: 232  FVAWIPHLHIHGIVSR 279
            F++W+P L  +GI+++
Sbjct: 1231 FISWLPPLEPNGIITK 1246


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +1

Query: 232  FVAWIPHLHIHGIVSR 279
            F++W+P L  +GI+++
Sbjct: 1227 FISWLPPLEPNGIITK 1242


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 346 VYSGTGIVMFLLVKYK 299
           +Y G   ++FLL+++K
Sbjct: 127 LYGGNSTIIFLLIRFK 142


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 143 WHQSRILQLNNIRT 184
           W++ R L+ +NIRT
Sbjct: 330 WNEHRTLERHNIRT 343


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 347 NNTCQI*LSNVKKLYLRKFCG 409
           N  C      VKK +  K+CG
Sbjct: 92  NKNCNAGSLTVKKNFANKYCG 112


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 143 WHQSRILQLNNIRT 184
           W++ R L+ +NIRT
Sbjct: 330 WNEHRTLERHNIRT 343


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 143 WHQSRILQLNNIRT 184
           W++ R L+ +NIRT
Sbjct: 330 WNEHRTLERHNIRT 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,318
Number of Sequences: 438
Number of extensions: 2940
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)