Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11o18
(632 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 38 0.005
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 32 0.45
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_58772| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_37094| Best HMM Match : PH (HMM E-Value=0.0005) 30 1.8
SB_4927| Best HMM Match : DUF590 (HMM E-Value=0) 30 1.8
SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2) 29 2.4
SB_7996| Best HMM Match : efhand (HMM E-Value=1.4) 29 2.4
SB_16029| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_46136| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03) 29 4.1
SB_13245| Best HMM Match : Ion_trans (HMM E-Value=3.3e-25) 28 5.5
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 28 5.5
SB_18852| Best HMM Match : Chitin_bind_4 (HMM E-Value=7.4) 28 7.2
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 241 VDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVN-MKPRKHVVAENANPKQI 417
+++L T KI+T LE R L K ++ + EK + R+VN ++ K++V + N +
Sbjct: 1414 LEDLRTSTAKIST--LEQQIRDLTKDRNSLDEKIEELRRQVNTLRDEKNIVERDLNELKS 1471
Query: 418 EALYLNKTVKSLSQTLETI 474
+ Y N+ ++S +T+E +
Sbjct: 1472 KIDYYNQEIESRDKTIEDL 1490
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -3
Query: 537 SFYFTCTKSFCITAFSFGFFIYSL*CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRF 370
S + C +FCI A S L C F FV ++ LYL +RIF +V RF
Sbjct: 1912 SLRYICLCAFCIFALSVSLRYLCL-CAICIFAVFVSLRYLYLCGIRIFALSVSLRF 1966
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 31.9 bits (69), Expect = 0.45
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Frame = +1
Query: 172 KNMEHSRVECELPTK-----MAHLDIMEVDELNTDVPKI--NTPVLELSPRVLRKRKSLM 330
K +E R + E PT+ + ++E EL V K P+ + R +K + +
Sbjct: 5459 KKVEEVRPKTEKPTEREAKSLKEKPLVEEKELTVSVEKAVEEKPLEKPITRKEKKVEEVK 5518
Query: 331 PEKSKPSNRRVNMKPRKHVVAENANP----KQIEALYLNKTVKSLSQTLETIYEEPKAE 495
P+K KP+ R K +V E P K +E L K + + +E + +PK E
Sbjct: 5519 PKKEKPTEREAKPLEEKPLVEEKELPVSAEKAVEEKPLEKPIARKEKKVEEV--QPKKE 5575
Score = 31.5 bits (68), Expect = 0.59
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Frame = +1
Query: 172 KNMEHSRVECELPTK-----MAHLDIMEVDELNTDVPKI--NTPVLELSPRVLRKRKSLM 330
K +E + + E PT+ + ++E EL V K P+ + R +K + +
Sbjct: 5618 KKVEEVKPKTEKPTEREAKPLKEKPLVEEKELTVSVEKAVEEKPLEKPITRKEKKVEEVK 5677
Query: 331 PEKSKPSNRRVNMKPRKHVVAENANP----KQIEALYLNKTVKSLSQTLETIYEEPKAE 495
P+K KP+ R +K +V E P K +E L K + + +E + +PK E
Sbjct: 5678 PKKEKPTEREAKSLDKKPLVEEKELPVSAKKAVEEKPLEKPITREEKKVEEV--KPKTE 5734
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +1
Query: 310 RKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLNKTVKSLSQTLETIYEEPK 489
+K + + P+K KP+ RR K +V E P E + K ++ E EE K
Sbjct: 5353 KKVEEVKPKKEKPTERRAKPLEEKPLVEEKELPVSAEKVVEEKPLEKQITRKEKTAEEVK 5412
Query: 490 AESG 501
+ G
Sbjct: 5413 PKKG 5416
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +1
Query: 244 DELNTDVPKI--NTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQI 417
+EL K+ P+ + R +K + + P+K KP+ R KH+V E P
Sbjct: 5118 EELPISAEKVVEEKPLEKPIARKEKKVEKVKPKKEKPTEREAKPLEEKHLVEEKELPVSA 5177
Query: 418 EALYLNKTV-KSLSQTLETIYE-EPKAE 495
E + K + K +++ + + E +PK E
Sbjct: 5178 EKVVEEKPLEKPITRKEDKVEEVKPKKE 5205
Score = 29.5 bits (63), Expect = 2.4
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Frame = +1
Query: 172 KNMEHSRVECELPTK-----MAHLDIMEVDELNTDVPKI--NTPVLELSPRVLRKRKSLM 330
K +E + + E PT+ + ++E EL K P+ + R +K + +
Sbjct: 6054 KKVEEVKPKTEKPTEREAKPLKEKPLVEEKELTVSAEKAVEEKPLEKPITREEKKVEEVK 6113
Query: 331 PEKSKPSNRRVNMKPRKHVVAENANP----KQIEALYLNKTVKSLSQTLETIYEEPKAE 495
P+K KP+ R +K +V E P K +E L K + + +E + +PK E
Sbjct: 6114 PKKEKPTEREAKPLDKKPLVEEKELPVSAKKAVEEKPLGKPITRKEKKVEEV--KPKKE 6170
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +1
Query: 172 KNMEHSRVECELPTK-----MAHLDIMEVDELNTDVPKI--NTPVLELSPRVLRKRKSLM 330
K +E + + E PT+ + ++E EL V K P+ + R +K + +
Sbjct: 6212 KKVEEVKPKKEKPTEREAKPLKEKPLVEEKELTVSVEKAVEEKPLEKPIARKEKKVEKVK 6271
Query: 331 PEKSKPSNRRVNMKPRKHVVAE 396
P+K KP+ R KH+V E
Sbjct: 6272 PKKEKPTEREAKPLEEKHLVEE 6293
Score = 28.7 bits (61), Expect = 4.1
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 232 IMEVDELNTDVPKINTPVLELSPRVLRKRK--SLMPEKSKPSNRRVNMKPRKHVVAENAN 405
++E DEL K+ L + RK K + P+K KP+ R + K +V E
Sbjct: 5273 LVEKDELPVSAEKV-VEENPLEKPITRKEKVEEVKPKKEKPTVREAKSREVKPLVEEKEL 5331
Query: 406 P----KQIEALYLNKTVKSLSQTLETIYEEPKAE 495
P K +E L K + + +E + +PK E
Sbjct: 5332 PVSAEKAVEEEPLEKPITGKEKKVEEV--KPKKE 5363
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 310 RKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLNKTVKSLSQTLETIYE-EP 486
+K + + P+K KP+ R K +V ++ P E + ++ E + E +P
Sbjct: 5248 KKGEEVKPKKEKPTEREAKPLEEKPLVEKDELPVSAEKVVEENPLEKPITRKEKVEEVKP 5307
Query: 487 KAESGDTEAFGARKIKRLL 543
K E +R++K L+
Sbjct: 5308 KKEKPTVREAKSREVKPLV 5326
Score = 28.3 bits (60), Expect = 5.5
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Frame = +1
Query: 172 KNMEHSRVECELPTK-----MAHLDIMEVDELNTDVPKI--NTPVLELSPRVLRKRKSLM 330
K +E + + E PT+ + ++E EL V K P+ + R +K + +
Sbjct: 5724 KKVEEVKPKTEKPTEREAKPLKEKPLVEEKELTVSVEKAVEEKPLEKPITRKEKKVEEVK 5783
Query: 331 PEKSKPSNRRVNMKPRKHVVAENANP----KQIEALYLNKTVKSLSQTLETIYEEPKAE 495
P+K KP+ R + K V E P + +E L K + + +E + +PK E
Sbjct: 5784 PKKEKPTEREAKPREVKPFVEEKELPVSAGQAVEEKPLEKPIARKEKKVEEV--KPKKE 5840
Score = 27.9 bits (59), Expect = 7.2
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Frame = +1
Query: 172 KNMEHSRVECELPTK-----MAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKS---L 327
K +E + + E PT+ + ++E EL K+ L ++ RK K+ +
Sbjct: 5353 KKVEEVKPKKEKPTERRAKPLEEKPLVEEKELPVSAEKV-VEEKPLEKQITRKEKTAEEV 5411
Query: 328 MPEKSKPSNRRVNMKPRKHVVAENANP----KQIEALYLNKTVKSLSQTLETIYEEPKAE 495
P+K KP +R K +V E P K +E L K + + +E + PK E
Sbjct: 5412 KPKKGKPMDREAKPLEEKPLVEEKELPVSAEKAVEEKPLEKPITRKEKKVEEV--RPKTE 5469
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 106 KFTPFASDRGTIMKN*ID--I*R*KNMEHSRVECELPTKMAHLDIMEVDELNTDVPKINT 279
K TP D T++K +D + K + ++ E + K ++VDE N V K++
Sbjct: 171 KVTPLERDYVTLLKEWVDKDLDLSKEVNETKKEVQETKKEVQETKIKVDETNEVVHKMDG 230
Query: 280 PVLELSPRVLRKRKSLMPEKSKPSNRRVNMK 372
+ E+S + + L K + S+++VN K
Sbjct: 231 KLSEMSLKAEKMAVDLASLKEEFSSKKVNSK 261
>SB_58772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/59 (22%), Positives = 27/59 (45%)
Frame = +1
Query: 241 VDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQI 417
V+ + V K+ T R+++ R ++PE KP R ++ H V + +++
Sbjct: 36 VETTPSSVTKVKTTQTVAKSRIIKTRTEVLPESQKPEIRDISQSETDHEVPPRSPTERV 94
>SB_37094| Best HMM Match : PH (HMM E-Value=0.0005)
Length = 1007
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = -3
Query: 540 QSFYFTCTKSFCITAFSFGFFIYSL*CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFHIH 361
QS F K C A+ F++ L + + S V + C Y +WV F ++ F I
Sbjct: 722 QSTIFPPVKDICNKAYEAEFYMCPLCDKQCPYWSLV-VNCPYAIWVHAFDNDSTVVFAIF 780
Query: 360 SAV*RFAF--FWH*RLSFTQNSW 298
++ F FW R + W
Sbjct: 781 MSIWATVFLEFWKRRQAVLAYEW 803
>SB_4927| Best HMM Match : DUF590 (HMM E-Value=0)
Length = 936
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = -3
Query: 540 QSFYFTCTKSFCITAFSFGFFIYSL*CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFHIH 361
QS F K C A+ F++ L + + S V + C Y +WV F ++ F I
Sbjct: 351 QSTIFPPVKDICNKAYEAEFYMCPLCDKQCPYWSLV-VNCPYAIWVHAFDNDSTVVFAIF 409
Query: 360 SAV*RFAF--FWH*RLSFTQNSW 298
++ F FW R + W
Sbjct: 410 MSIWATVFLEFWKRRQAVLAYEW 432
>SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)
Length = 356
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +1
Query: 202 ELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRK 381
E P + A + + +N+ P+ + +S R K+ + EKS VN+K +
Sbjct: 40 ENPAESAITRTLGIRNVNSAEPRTHVKKTSISKRKHAKKHKVKHEKSDDKKSHVNVKKGE 99
Query: 382 HVVAE----NANPKQIEALYLNKTVKSLSQTLETIY-EEPKAESG 501
+V+ + + N + + +K +KS L T++ E+ K E+G
Sbjct: 100 NVLNKTRDSSKNRTRRASEKGSKKLKSRKHGLPTLHAEKDKVENG 144
>SB_7996| Best HMM Match : efhand (HMM E-Value=1.4)
Length = 570
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 376 RKHVVAENANPKQIEAL--YLNKTVKSLSQTLETIYEEPKAESGDTEAFGARKIKRLLTF 549
R+ +V + +N + + YL K + TL+ + E K ++GD F R ++R L
Sbjct: 209 RRSIVEDESNKSAFQHVLEYLEKNDDE-TVTLDELLEILKHKAGDDGVFAKRTLQRQLET 267
Query: 550 QLGNQYT 570
GN+ T
Sbjct: 268 HYGNRVT 274
>SB_16029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 295 SPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQIE 420
+PR L ++ +P S P R +P K + EN+NP+++E
Sbjct: 214 NPRELEPLRTRIPVNSNPRKR----EPTKTRIRENSNPRELE 251
>SB_46136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/89 (28%), Positives = 36/89 (40%)
Frame = +1
Query: 229 DIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANP 408
+ ME D+ N V + V + +LR + + E K +V RKH N P
Sbjct: 74 EAMETDQANQSVSDLEGIVQSMGSEILRLQSLVSAEDDKMLRYKVENIRRKH----NYIP 129
Query: 409 KQIEALYLNKTVKSLSQTLETIYEEPKAE 495
+E L L L +E EE KA+
Sbjct: 130 LIMEMLKLLAKKGELVPLVEKAKEEQKAK 158
>SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03)
Length = 1832
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 146 RIKLIYDAEKTWNTREWSASYQLKW 220
++ + YD E+ W TREW A Y W
Sbjct: 58 KVLVEYDGEE-WTTREWLAVYTKSW 81
>SB_13245| Best HMM Match : Ion_trans (HMM E-Value=3.3e-25)
Length = 816
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 105 EIYAFCERSWNHNEELN*YMTLKKHGTLESGVRVTN 212
+ YAFCE NHN E++ +M L+++ ++ TN
Sbjct: 607 DTYAFCEEKGNHNGEVH-HMILEENSKEKNHFSKTN 641
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Frame = +1
Query: 277 TPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVV---------AENANPKQIEAL- 426
T ++++ L + K MP K + + R N+K K + ++N++ Q+ AL
Sbjct: 289 TELVDVLSAELTEVKEAMPSKKEIPDMRNNLKDLKSSINEVKKQTDDSQNSHASQLSALE 348
Query: 427 -YLNKTVKSLSQTLETIYEEPKA--ESGDTEAFGARKI 531
+++ K+L+Q L+ + P A + + E F +KI
Sbjct: 349 KTVDEMKKALNQQLKDVSNRPAATVDMAEVEKFVGKKI 386
>SB_18852| Best HMM Match : Chitin_bind_4 (HMM E-Value=7.4)
Length = 143
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 310 RKRKSLMPEKSKPSNRRVNMKPRKHVV 390
R R+ L P+ S P + ++++PR H++
Sbjct: 64 RPRRDLNPQSSDPKSDALSIRPRGHII 90
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,573,583
Number of Sequences: 59808
Number of extensions: 337209
Number of successful extensions: 769
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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