Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o08
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.2  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   8.2  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   8.2  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 470 FCSNYPINRLVIIGAFIFILHHKL 399
           F  N+P    ++I  FIF+  + L
Sbjct: 7   FGKNFPSTSFILINYFIFLYFNSL 30


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
          protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 3  LFVIVVPTCDSIEDY 47
          LFV+V  TC   EDY
Sbjct: 7  LFVLVTITCVIAEDY 21


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
          protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 3  LFVIVVPTCDSIEDY 47
          LFV+V  TC   EDY
Sbjct: 7  LFVLVTITCVIAEDY 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,987
Number of Sequences: 438
Number of extensions: 4553
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)