SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o06
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein.               37   0.079
BX537969-1|CAD97933.1|  995|Homo sapiens hypothetical protein pr...    37   0.079
BC024153-1|AAH24153.1|  930|Homo sapiens RNA binding motif prote...    37   0.079
BC008733-1|AAH08733.1|  930|Homo sapiens RNA binding motif prote...    37   0.079
BC004181-1|AAH04181.1|  930|Homo sapiens RNA binding motif prote...    37   0.079
BC003089-1|AAH03089.1|  852|Homo sapiens RNA binding motif prote...    37   0.079
BC000681-1|AAH00681.1|  541|Homo sapiens RBM10 protein protein.        37   0.079
AL513366-5|CAI41701.1|  930|Homo sapiens RNA binding motif prote...    37   0.079
AL513366-4|CAI41700.1|  853|Homo sapiens RNA binding motif prote...    37   0.079
AK222858-1|BAD96578.1|  330|Homo sapiens zinc finger protein 265...    33   0.73 
BC039814-1|AAH39814.1|  320|Homo sapiens zinc finger, RAN-bindin...    32   1.7  
AL512443-2|CAH70059.1|  320|Homo sapiens zinc finger, RAN-bindin...    32   1.7  
AL512443-1|CAH70058.1|  330|Homo sapiens zinc finger, RAN-bindin...    32   1.7  
AL136945-1|CAB66879.1|  311|Homo sapiens hypothetical protein pr...    32   1.7  
AF065392-1|AAD09747.1|  311|Homo sapiens ZIS2 protein.                 32   1.7  
AF065391-1|AAD09746.1|  337|Homo sapiens ZIS1 protein.                 32   1.7  
AB209568-1|BAD92805.1|  316|Homo sapiens zinc finger protein 265...    32   1.7  
BC108734-1|AAI08735.1|  409|Homo sapiens testis expressed 13A pr...    32   2.2  
BC042547-1|AAH42547.1|  409|Homo sapiens TEX13A protein protein.       32   2.2  
AF285597-1|AAK31976.1|  409|Homo sapiens testis protein TEX13A p...    32   2.2  
U73168-1|AAB42216.1|  698|Homo sapiens partial CDS, human putati...    30   9.0  
U23946-1|AAA99715.1|  815|Homo sapiens LUCA15 protein.                 30   9.0  
BX537671-1|CAD97806.1|  681|Homo sapiens hypothetical protein pr...    30   9.0  
AL358780-2|CAI13978.2|  818|Homo sapiens novel protein (FLJ16611...    30   9.0  
AK131456-1|BAD18601.1|  762|Homo sapiens protein ( Homo sapiens ...    30   9.0  
AF103802-1|AAF02422.2|  815|Homo sapiens lung cancer tumor suppr...    30   9.0  
AF091263-1|AAD04159.1|  815|Homo sapiens RNA binding motif prote...    30   9.0  
AB234866-1|BAE93016.1|  827|Homo sapiens DLN-1 protein.                30   9.0  

>D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein.
          Length = 1010

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 297 DWLCNKCGVQNFKRREKCFK--CGVPKSE 323


>BX537969-1|CAD97933.1|  995|Homo sapiens hypothetical protein
           protein.
          Length = 995

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 281 DWLCNKCGVQNFKRREKCFK--CGVPKSE 307


>BC024153-1|AAH24153.1|  930|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 930

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 216 DWLCNKCGVQNFKRREKCFK--CGVPKSE 242


>BC008733-1|AAH08733.1|  930|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 930

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 216 DWLCNKCGVQNFKRREKCFK--CGVPKSE 242


>BC004181-1|AAH04181.1|  930|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 930

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 216 DWLCNKCGVQNFKRREKCFK--CGVPKSE 242


>BC003089-1|AAH03089.1|  852|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 852

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 139 DWLCNKCGVQNFKRREKCFK--CGVPKSE 165


>BC000681-1|AAH00681.1|  541|Homo sapiens RBM10 protein protein.
          Length = 541

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 88  DWLCNKCGVQNFKRREKCFK--CGVPKSE 114


>AL513366-5|CAI41701.1|  930|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 930

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 216 DWLCNKCGVQNFKRREKCFK--CGVPKSE 242


>AL513366-4|CAI41700.1|  853|Homo sapiens RNA binding motif protein
           10 protein.
          Length = 853

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
           DW+C KCG+ NFKRR+ C++  C   +SE
Sbjct: 139 DWLCNKCGVQNFKRREKCFK--CGVPKSE 165


>AK222858-1|BAD96578.1|  330|Homo sapiens zinc finger protein 265
           isoform 1 variant protein.
          Length = 330

 Score = 33.5 bits (73), Expect = 0.73
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 561 SPGDWIC---KCGLYNFKRRQVCYRRTCNGKRSEG 656
           S GDWIC   KCG  NF RR  C R  C  +++ G
Sbjct: 9   SDGDWICPDKKCGNVNFARRTSCNR--CGREKTTG 41


>BC039814-1|AAH39814.1|  320|Homo sapiens zinc finger, RAN-binding
           domain containing 2 protein.
          Length = 320

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
           S GDWIC   KCG  NF RR  C R
Sbjct: 9   SDGDWICPDKKCGNVNFARRTSCNR 33


>AL512443-2|CAH70059.1|  320|Homo sapiens zinc finger, RAN-binding
           domain containing 2 protein.
          Length = 320

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
           S GDWIC   KCG  NF RR  C R
Sbjct: 9   SDGDWICPDKKCGNVNFARRTSCNR 33


>AL512443-1|CAH70058.1|  330|Homo sapiens zinc finger, RAN-binding
           domain containing 2 protein.
          Length = 330

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
           S GDWIC   KCG  NF RR  C R
Sbjct: 9   SDGDWICPDKKCGNVNFARRTSCNR 33


>AL136945-1|CAB66879.1|  311|Homo sapiens hypothetical protein
           protein.
          Length = 311

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
           S GDWIC   KCG  NF RR  C R
Sbjct: 9   SDGDWICPDKKCGNVNFARRTSCNR 33


>AF065392-1|AAD09747.1|  311|Homo sapiens ZIS2 protein.
          Length = 311

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
           S GDWIC   KCG  NF RR  C R
Sbjct: 9   SDGDWICPDKKCGNVNFARRTSCNR 33


>AF065391-1|AAD09746.1|  337|Homo sapiens ZIS1 protein.
          Length = 337

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
           S GDWIC   KCG  NF RR  C R
Sbjct: 9   SDGDWICPDKKCGNVNFARRTSCNR 33


>AB209568-1|BAD92805.1|  316|Homo sapiens zinc finger protein 265
           isoform 1 variant protein.
          Length = 316

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
           S GDWIC   KCG  NF RR  C R
Sbjct: 11  SDGDWICPDKKCGNVNFARRTSCNR 35


>BC108734-1|AAI08735.1|  409|Homo sapiens testis expressed 13A
           protein.
          Length = 409

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +3

Query: 528 DKHQDEVQNNASPGDWICK-CGLYNFKRRQVCY 623
           + HQ        PGDW C  C   NF RR  C+
Sbjct: 365 EPHQQRPPVYRRPGDWDCPWCNAVNFSRRDTCF 397


>BC042547-1|AAH42547.1|  409|Homo sapiens TEX13A protein protein.
          Length = 409

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +3

Query: 528 DKHQDEVQNNASPGDWICK-CGLYNFKRRQVCY 623
           + HQ        PGDW C  C   NF RR  C+
Sbjct: 365 EPHQQRPPVYRRPGDWDCPWCNAVNFSRRDTCF 397


>AF285597-1|AAK31976.1|  409|Homo sapiens testis protein TEX13A
           protein.
          Length = 409

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +3

Query: 528 DKHQDEVQNNASPGDWICK-CGLYNFKRRQVCY 623
           + HQ        PGDW C  C   NF RR  C+
Sbjct: 365 EPHQQRPPVYRRPGDWDCPWCNAVNFSRRDTCF 397


>U73168-1|AAB42216.1|  698|Homo sapiens partial CDS, human putative
           tumor suppressor (U23946) protein.
          Length = 698

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYR 626
           DW+C KC L NF++R  C+R
Sbjct: 68  DWLCNKCCLNNFRKRLKCFR 87


>U23946-1|AAA99715.1|  815|Homo sapiens LUCA15 protein.
          Length = 815

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYR 626
           DW+C KC L NF++R  C+R
Sbjct: 184 DWLCNKCCLNNFRKRLKCFR 203


>BX537671-1|CAD97806.1|  681|Homo sapiens hypothetical protein
           protein.
          Length = 681

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 555 CSAPHPGACPFLFPYQTCP 499
           C++ HP  CP + P +TCP
Sbjct: 597 CASVHPKTCPVVLPPKTCP 615


>AL358780-2|CAI13978.2|  818|Homo sapiens novel protein (FLJ16611)
           protein.
          Length = 818

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 690 HRYDPHHLHKLHPPIFSHYKFYGNRPDVF*SCIDHTCRSN 571
           H +  HH H+  PP  SH+  + +RP         +C S+
Sbjct: 253 HHHHHHHHHRAQPPQQSHHPPHHHRPQPHLGSFPESCSSD 292


>AK131456-1|BAD18601.1|  762|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16611 fis, clone TESTI4011829. ).
          Length = 762

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 690 HRYDPHHLHKLHPPIFSHYKFYGNRPDVF*SCIDHTCRSN 571
           H +  HH H+  PP  SH+  + +RP         +C S+
Sbjct: 253 HHHHHHHHHRAQPPQQSHHPPHHHRPQPHLGSFPESCSSD 292


>AF103802-1|AAF02422.2|  815|Homo sapiens lung cancer tumor
           suppressor H37 protein.
          Length = 815

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYR 626
           DW+C KC L NF++R  C+R
Sbjct: 184 DWLCNKCCLNNFRKRLKCFR 203


>AF091263-1|AAD04159.1|  815|Homo sapiens RNA binding motif protein
           5 protein.
          Length = 815

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWIC-KCGLYNFKRRQVCYR 626
           DW+C KC L NF++R  C+R
Sbjct: 184 DWLCNKCCLNNFRKRLKCFR 203


>AB234866-1|BAE93016.1|  827|Homo sapiens DLN-1 protein.
          Length = 827

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 690 HRYDPHHLHKLHPPIFSHYKFYGNRPDVF*SCIDHTCRSN 571
           H +  HH H+  PP  SH+  + +RP         +C S+
Sbjct: 262 HHHHHHHHHRAQPPQQSHHPPHHHRPQPHLGSFPESCSSD 301


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,722,443
Number of Sequences: 237096
Number of extensions: 1513175
Number of successful extensions: 3516
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3515
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -