BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11o06
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein. 37 0.079
BX537969-1|CAD97933.1| 995|Homo sapiens hypothetical protein pr... 37 0.079
BC024153-1|AAH24153.1| 930|Homo sapiens RNA binding motif prote... 37 0.079
BC008733-1|AAH08733.1| 930|Homo sapiens RNA binding motif prote... 37 0.079
BC004181-1|AAH04181.1| 930|Homo sapiens RNA binding motif prote... 37 0.079
BC003089-1|AAH03089.1| 852|Homo sapiens RNA binding motif prote... 37 0.079
BC000681-1|AAH00681.1| 541|Homo sapiens RBM10 protein protein. 37 0.079
AL513366-5|CAI41701.1| 930|Homo sapiens RNA binding motif prote... 37 0.079
AL513366-4|CAI41700.1| 853|Homo sapiens RNA binding motif prote... 37 0.079
AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265... 33 0.73
BC039814-1|AAH39814.1| 320|Homo sapiens zinc finger, RAN-bindin... 32 1.7
AL512443-2|CAH70059.1| 320|Homo sapiens zinc finger, RAN-bindin... 32 1.7
AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-bindin... 32 1.7
AL136945-1|CAB66879.1| 311|Homo sapiens hypothetical protein pr... 32 1.7
AF065392-1|AAD09747.1| 311|Homo sapiens ZIS2 protein. 32 1.7
AF065391-1|AAD09746.1| 337|Homo sapiens ZIS1 protein. 32 1.7
AB209568-1|BAD92805.1| 316|Homo sapiens zinc finger protein 265... 32 1.7
BC108734-1|AAI08735.1| 409|Homo sapiens testis expressed 13A pr... 32 2.2
BC042547-1|AAH42547.1| 409|Homo sapiens TEX13A protein protein. 32 2.2
AF285597-1|AAK31976.1| 409|Homo sapiens testis protein TEX13A p... 32 2.2
U73168-1|AAB42216.1| 698|Homo sapiens partial CDS, human putati... 30 9.0
U23946-1|AAA99715.1| 815|Homo sapiens LUCA15 protein. 30 9.0
BX537671-1|CAD97806.1| 681|Homo sapiens hypothetical protein pr... 30 9.0
AL358780-2|CAI13978.2| 818|Homo sapiens novel protein (FLJ16611... 30 9.0
AK131456-1|BAD18601.1| 762|Homo sapiens protein ( Homo sapiens ... 30 9.0
AF103802-1|AAF02422.2| 815|Homo sapiens lung cancer tumor suppr... 30 9.0
AF091263-1|AAD04159.1| 815|Homo sapiens RNA binding motif prote... 30 9.0
AB234866-1|BAE93016.1| 827|Homo sapiens DLN-1 protein. 30 9.0
>D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein.
Length = 1010
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 297 DWLCNKCGVQNFKRREKCFK--CGVPKSE 323
>BX537969-1|CAD97933.1| 995|Homo sapiens hypothetical protein
protein.
Length = 995
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 281 DWLCNKCGVQNFKRREKCFK--CGVPKSE 307
>BC024153-1|AAH24153.1| 930|Homo sapiens RNA binding motif protein
10 protein.
Length = 930
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 216 DWLCNKCGVQNFKRREKCFK--CGVPKSE 242
>BC008733-1|AAH08733.1| 930|Homo sapiens RNA binding motif protein
10 protein.
Length = 930
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 216 DWLCNKCGVQNFKRREKCFK--CGVPKSE 242
>BC004181-1|AAH04181.1| 930|Homo sapiens RNA binding motif protein
10 protein.
Length = 930
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 216 DWLCNKCGVQNFKRREKCFK--CGVPKSE 242
>BC003089-1|AAH03089.1| 852|Homo sapiens RNA binding motif protein
10 protein.
Length = 852
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 139 DWLCNKCGVQNFKRREKCFK--CGVPKSE 165
>BC000681-1|AAH00681.1| 541|Homo sapiens RBM10 protein protein.
Length = 541
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 88 DWLCNKCGVQNFKRREKCFK--CGVPKSE 114
>AL513366-5|CAI41701.1| 930|Homo sapiens RNA binding motif protein
10 protein.
Length = 930
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 216 DWLCNKCGVQNFKRREKCFK--CGVPKSE 242
>AL513366-4|CAI41700.1| 853|Homo sapiens RNA binding motif protein
10 protein.
Length = 853
Score = 36.7 bits (81), Expect = 0.079
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYRRTCNGKRSE 653
DW+C KCG+ NFKRR+ C++ C +SE
Sbjct: 139 DWLCNKCGVQNFKRREKCFK--CGVPKSE 165
>AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.73
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 561 SPGDWIC---KCGLYNFKRRQVCYRRTCNGKRSEG 656
S GDWIC KCG NF RR C R C +++ G
Sbjct: 9 SDGDWICPDKKCGNVNFARRTSCNR--CGREKTTG 41
>BC039814-1|AAH39814.1| 320|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 320
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
S GDWIC KCG NF RR C R
Sbjct: 9 SDGDWICPDKKCGNVNFARRTSCNR 33
>AL512443-2|CAH70059.1| 320|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 320
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
S GDWIC KCG NF RR C R
Sbjct: 9 SDGDWICPDKKCGNVNFARRTSCNR 33
>AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 330
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
S GDWIC KCG NF RR C R
Sbjct: 9 SDGDWICPDKKCGNVNFARRTSCNR 33
>AL136945-1|CAB66879.1| 311|Homo sapiens hypothetical protein
protein.
Length = 311
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
S GDWIC KCG NF RR C R
Sbjct: 9 SDGDWICPDKKCGNVNFARRTSCNR 33
>AF065392-1|AAD09747.1| 311|Homo sapiens ZIS2 protein.
Length = 311
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
S GDWIC KCG NF RR C R
Sbjct: 9 SDGDWICPDKKCGNVNFARRTSCNR 33
>AF065391-1|AAD09746.1| 337|Homo sapiens ZIS1 protein.
Length = 337
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
S GDWIC KCG NF RR C R
Sbjct: 9 SDGDWICPDKKCGNVNFARRTSCNR 33
>AB209568-1|BAD92805.1| 316|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 316
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 561 SPGDWIC---KCGLYNFKRRQVCYR 626
S GDWIC KCG NF RR C R
Sbjct: 11 SDGDWICPDKKCGNVNFARRTSCNR 35
>BC108734-1|AAI08735.1| 409|Homo sapiens testis expressed 13A
protein.
Length = 409
Score = 31.9 bits (69), Expect = 2.2
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +3
Query: 528 DKHQDEVQNNASPGDWICK-CGLYNFKRRQVCY 623
+ HQ PGDW C C NF RR C+
Sbjct: 365 EPHQQRPPVYRRPGDWDCPWCNAVNFSRRDTCF 397
>BC042547-1|AAH42547.1| 409|Homo sapiens TEX13A protein protein.
Length = 409
Score = 31.9 bits (69), Expect = 2.2
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +3
Query: 528 DKHQDEVQNNASPGDWICK-CGLYNFKRRQVCY 623
+ HQ PGDW C C NF RR C+
Sbjct: 365 EPHQQRPPVYRRPGDWDCPWCNAVNFSRRDTCF 397
>AF285597-1|AAK31976.1| 409|Homo sapiens testis protein TEX13A
protein.
Length = 409
Score = 31.9 bits (69), Expect = 2.2
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +3
Query: 528 DKHQDEVQNNASPGDWICK-CGLYNFKRRQVCY 623
+ HQ PGDW C C NF RR C+
Sbjct: 365 EPHQQRPPVYRRPGDWDCPWCNAVNFSRRDTCF 397
>U73168-1|AAB42216.1| 698|Homo sapiens partial CDS, human putative
tumor suppressor (U23946) protein.
Length = 698
Score = 29.9 bits (64), Expect = 9.0
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYR 626
DW+C KC L NF++R C+R
Sbjct: 68 DWLCNKCCLNNFRKRLKCFR 87
>U23946-1|AAA99715.1| 815|Homo sapiens LUCA15 protein.
Length = 815
Score = 29.9 bits (64), Expect = 9.0
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYR 626
DW+C KC L NF++R C+R
Sbjct: 184 DWLCNKCCLNNFRKRLKCFR 203
>BX537671-1|CAD97806.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 29.9 bits (64), Expect = 9.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 555 CSAPHPGACPFLFPYQTCP 499
C++ HP CP + P +TCP
Sbjct: 597 CASVHPKTCPVVLPPKTCP 615
>AL358780-2|CAI13978.2| 818|Homo sapiens novel protein (FLJ16611)
protein.
Length = 818
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 690 HRYDPHHLHKLHPPIFSHYKFYGNRPDVF*SCIDHTCRSN 571
H + HH H+ PP SH+ + +RP +C S+
Sbjct: 253 HHHHHHHHHRAQPPQQSHHPPHHHRPQPHLGSFPESCSSD 292
>AK131456-1|BAD18601.1| 762|Homo sapiens protein ( Homo sapiens
cDNA FLJ16611 fis, clone TESTI4011829. ).
Length = 762
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 690 HRYDPHHLHKLHPPIFSHYKFYGNRPDVF*SCIDHTCRSN 571
H + HH H+ PP SH+ + +RP +C S+
Sbjct: 253 HHHHHHHHHRAQPPQQSHHPPHHHRPQPHLGSFPESCSSD 292
>AF103802-1|AAF02422.2| 815|Homo sapiens lung cancer tumor
suppressor H37 protein.
Length = 815
Score = 29.9 bits (64), Expect = 9.0
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYR 626
DW+C KC L NF++R C+R
Sbjct: 184 DWLCNKCCLNNFRKRLKCFR 203
>AF091263-1|AAD04159.1| 815|Homo sapiens RNA binding motif protein
5 protein.
Length = 815
Score = 29.9 bits (64), Expect = 9.0
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +3
Query: 570 DWIC-KCGLYNFKRRQVCYR 626
DW+C KC L NF++R C+R
Sbjct: 184 DWLCNKCCLNNFRKRLKCFR 203
>AB234866-1|BAE93016.1| 827|Homo sapiens DLN-1 protein.
Length = 827
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 690 HRYDPHHLHKLHPPIFSHYKFYGNRPDVF*SCIDHTCRSN 571
H + HH H+ PP SH+ + +RP +C S+
Sbjct: 262 HHHHHHHHHRAQPPQQSHHPPHHHRPQPHLGSFPESCSSD 301
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,722,443
Number of Sequences: 237096
Number of extensions: 1513175
Number of successful extensions: 3516
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3515
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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