Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11o01
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical p... 87 1e-17
AF045640-2|AAM81123.1| 185|Caenorhabditis elegans Hypothetical ... 42 4e-04
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 30 1.2
U66217-1|AAB07466.1| 86|Caenorhabditis elegans ZK563.5 protein. 30 1.2
U40061-4|AAA81151.3| 239|Caenorhabditis elegans Hypothetical pr... 29 2.8
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 29 2.8
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 29 3.7
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 29 3.7
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 29 3.7
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 29 3.7
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81468-2|CAN99666.1| 950|Caenorhabditis elegans Hypothetical pr... 28 6.5
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 28 6.5
AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical ... 28 6.5
AF101305-1|AAF98592.2| 179|Caenorhabditis elegans Hypothetical ... 28 6.5
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 27 8.6
AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-li... 27 8.6
AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical ... 27 8.6
AF045643-6|AAC02593.2| 570|Caenorhabditis elegans Hypothetical ... 27 8.6
AC006729-9|AAF60470.1| 670|Caenorhabditis elegans Hypothetical ... 27 8.6
>U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical
protein C25H3.4 protein.
Length = 516
Score = 87.0 bits (206), Expect = 1e-17
Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Frame = +3
Query: 84 MFAKPYKLKSNNTLKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDI 263
MF KP+ +K N +NS+ ++L R+ E + K V +KL G
Sbjct: 1 MFKKPFTVKKNTNQRNSDSRKLFNRLKEEVNGESNIDKKGQVAQ------VKLTTFEGTQ 54
Query: 264 VNVYVIDGVPIIMEVAEG--LVPTVCALWQAPEMVPHIIIHTPVFPKVQGGAPLYLPGVE 437
+NVY ID VP++ E +E + PTV +W + P +I H PVF ++ GA L LPGV
Sbjct: 55 MNVYTIDKVPMLFEFSENGNIYPTVYYMWNNQKTFPVLICHEPVFSYLENGADLMLPGV- 113
Query: 438 LPAGGTGFPQFCKGELIA-AHTSNNSATV----IVGRAILSSGDMLL-RTAGVCMETLHV 599
+ + FP F KG +A A S+ + TV VG +++SS +M++ G ++ LHV
Sbjct: 114 IRSSIFPFPTFRKGAPVAIAFYSSETETVSGPSAVGCSMMSSEEMVVCGFKGKGVQVLHV 173
Query: 600 FGDHL 614
F D L
Sbjct: 174 FRDQL 178
>AF045640-2|AAM81123.1| 185|Caenorhabditis elegans Hypothetical
protein C11D2.7 protein.
Length = 185
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Frame = +3
Query: 123 LKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDIVNVYVIDGVPIIM 302
LK+S +K + +++I FP + E +++++P K K++ I + GV +
Sbjct: 17 LKSSVQKGIRKKLIENFPYL-EPHLEEILPKKEN---FKVIKCKDHIELLADHLGVVRFV 72
Query: 303 EVAE-GLVPTVCALWQAPEMVPHIIIHTPVFPKVQGGAPLYLPGVELPAGGTGFPQFCKG 479
+ +PT+ L + P ++PH + + G+ + PG+ P G P K
Sbjct: 73 KTRNTDYIPTLRTLHKYPFILPHQQVDKGAIKFILNGSSIMCPGLTSP-GAKLTPLVPKD 131
Query: 480 ELIAAHTSNNSATVIVGRAILSSGDMLLRTAGVCMETLHVFGDHL 614
++A + +G +SS ++ G +E LH D L
Sbjct: 132 SVVAVMAEGKQHALAIGLMSMSSEEIQSVNKGNGIENLHYLNDGL 176
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 96 PYKLKSNNTLKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDIVNV 272
P L + L+N K + Q ++H+ IT E++ QLV +K + ++L +S GD + V
Sbjct: 6 PETLFHDLILENVVKFGIRQALVHDNQVITFEEIPQLV-SKLVYKLLELGISQGDTILV 63
>U66217-1|AAB07466.1| 86|Caenorhabditis elegans ZK563.5 protein.
Length = 86
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -2
Query: 374 NDMWDHFRSLPERAHRRD-QPFC-YFHYNWHPVYHVHIYN 261
N W + P H +D +PF YF W +Y+V ++N
Sbjct: 2 NPQWAEWFXFPHNHHAKDTEPFXKYFDKTWIEIYYVSLHN 41
>U40061-4|AAA81151.3| 239|Caenorhabditis elegans Hypothetical
protein ZK563.5 protein.
Length = 239
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 374 NDMWDHFRSLPERAHRRD-QPFC-YFHYNWHPVYHVHIYN 261
N W + + P H +D +PF YF W +Y+V ++N
Sbjct: 122 NPQWADWFAFPYNHHAKDTEPFRKYFDKTWIEIYYVSLHN 161
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +3
Query: 423 LPGVELPAGGTGFPQFCKGELIAAHTSNNSATVIVGRAILSSGDMLLRTAGVCMETLHVF 602
+PGV +P G + A T + + G+ D LLR A V + +F
Sbjct: 194 VPGVVIPGSGA------TSAAVTAVTGRDPK--VFGKPHKPMADFLLRRAHVDPKRTVMF 245
Query: 603 GDHLSKDIKFG 635
GD L DI FG
Sbjct: 246 GDRLDTDIMFG 256
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -3
Query: 517 VAELLLVCAAINSPLQNCGKPVPPAGSST 431
+AE L + A INS N GKP PPA +ST
Sbjct: 587 LAECLSLRAVINS--SNFGKPPPPAAAST 613
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 350 SLPERA-HRRDQPFCYFHYNWHPVYHVHIYNVSRGQHQFHA 231
S P R H +FH+N H +H H +NV H F A
Sbjct: 130 STPSRVPHHPSSQVHHFHHNLH--HHTHTHNVQVQNHYFGA 168
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 350 SLPERA-HRRDQPFCYFHYNWHPVYHVHIYNVSRGQHQFHA 231
S P R H +FH+N H +H H +NV H F A
Sbjct: 130 STPSRVPHHPSSQVHHFHHNLH--HHTHTHNVQVQNHYFGA 168
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 350 SLPERA-HRRDQPFCYFHYNWHPVYHVHIYNVSRGQHQFHA 231
S P R H +FH+N H +H H +NV H F A
Sbjct: 130 STPSRVPHHPSSQVHHFHHNLH--HHTHTHNVQVQNHYFGA 168
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 274 YTFTMSPEDNTNFMQMPIDLAGTSCFTFSSVIVGNS 167
Y FT+SP D T F P+D + F ++ G S
Sbjct: 1596 YNFTISPFDGTIFTNSPLDFENIKTYRF-NITAGKS 1630
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 174 PTITEEKVKQLV-PAKSIGICMKLVLSSGDIVNVYVIDGVPIIMEVAEGL 320
P T+E ++ ++ KSIGIC V+++G +V ++ + + ++A+ L
Sbjct: 129 PHTTDELLETIILRIKSIGICADCVINNGLKEDVVMMKNIKRLYDIAKAL 178
>Z81468-2|CAN99666.1| 950|Caenorhabditis elegans Hypothetical
protein C13B4.1b protein.
Length = 950
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 509 FCHSYCWSSYSFQ--RRHATENCWSMHGDTSCI 601
+CH YCW S+ ++ RR A + +S D CI
Sbjct: 880 YCHMYCWISFYWRETRRSARSSAYSNFRDL-CI 911
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 286 PSITYTFTMSPEDNTNFMQMPIDLAGTSCFTFSS 185
PSI + FT + E N N P+ L + F F+S
Sbjct: 37 PSIGHYFTHTTEFNKNIHNAPLSLRENTLFAFNS 70
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 6 RKYTRPKNFHGNSQIFRNLIS*RKI 80
R+Y+ P+ FHGN Q RN S R +
Sbjct: 317 RRYSSPRRFHGNHQPRRNPSSTRLV 341
>AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical
protein Y24D9B.1 protein.
Length = 550
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 6 RKYTRPKNFHGNSQIFRNLIS*RKI 80
R+Y+ P+ FHGN Q RN S R +
Sbjct: 317 RRYSSPRRFHGNHQPRRNPSSTRLV 341
>AF101305-1|AAF98592.2| 179|Caenorhabditis elegans Hypothetical
protein C04F5.2 protein.
Length = 179
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -3
Query: 418 RGAPPW---TFGKTGVCIMICGTISGACQSAHTVGTNPSATSIIIGTPSITYTFT 263
RG+ P+ FG +C +ICG CQ G + S++ + Y T
Sbjct: 67 RGSHPFFGLLFGCVLLCYIICGVAEAVCQFLFLFGGSSDTLSVVYLIYDLAYAAT 121
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +3
Query: 6 RKYTRPKNFHGNSQIFRNLIS*RKIEMFAKPYKLKSNNTLKNSEKKQLAQRIIHEFPTIT 185
++ RP +FHG+S RN+ R+ F P KL + ++NS + I+ I
Sbjct: 556 KRQKRPSSFHGHSVSERNI---RQDLSFYLPLKLHGSR-VENSRRTIKKNAIVGNDRNIE 611
Query: 186 EEKVK 200
EE +K
Sbjct: 612 EEFLK 616
>AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-like
protein protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 329 RRDQPFCYFHYNWHPVYHVHIYNVS 255
+ DQ CYFHY YH+H++ ++
Sbjct: 233 KTDQIKCYFHYQ-PSFYHLHVHFIN 256
>AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical
protein Y113G7A.9 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 329 RRDQPFCYFHYNWHPVYHVHIYNVS 255
+ DQ CYFHY YH+H++ ++
Sbjct: 233 KTDQIKCYFHYQ-PSFYHLHVHFIN 256
>AF045643-6|AAC02593.2| 570|Caenorhabditis elegans Hypothetical
protein F58H7.2 protein.
Length = 570
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 6 RKYTRPKNFHGNSQIFRNLIS*RKIEMFAKPYKLKSNNTLKNSE 137
R R NF F+ L R +E+ AKP++ + N+LKN E
Sbjct: 35 RAADRKINFEWAKNSFQKLDESRAVEISAKPFE-ELRNSLKNGE 77
>AC006729-9|AAF60470.1| 670|Caenorhabditis elegans Hypothetical
protein Y24D9A.1a protein.
Length = 670
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 562 SSMSPLERIARPTITVAELLLVCAAINSPLQNCGKPVPPAGSST 431
SS LER ++P + + L P+ C P PP T
Sbjct: 467 SSSPQLERSSQPASKLNPIKLAATIAMQPIPKCDPPPPPPSRDT 510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,642,054
Number of Sequences: 27780
Number of extensions: 364698
Number of successful extensions: 1220
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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