Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11n20
(658 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 41 9e-06
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 27 0.16
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 26 0.28
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 26 0.28
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.64
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 23 2.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.6
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 23 2.6
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 4.5
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 4.5
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 41.1 bits (92), Expect = 9e-06
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Frame = +3
Query: 246 SDTCLHAIPDEIKN-LINLQSLLMFGNKIEVFNE-NITTLRKLKVLDLSRNELKSIPESL 419
SD L + ++ N L L L + GN I + LK LDLS NEL S+P++L
Sbjct: 391 SDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVPDAL 450
Query: 420 NNMKELTSINFSSNQIEDM--PKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLK 593
++ L +++ N+I + +L L + + N + + +LP+L L L
Sbjct: 451 RDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDIGNLSRGMLWDLPNLQILNLA 510
Query: 594 SNLIESI 614
N ++ +
Sbjct: 511 RNKVQHV 517
Score = 33.9 bits (74), Expect = 0.001
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +3
Query: 366 LKVLDLSRNELKSIPES--LNNMKELTSINFSSNQIEDM--PKIGDLPNLIIIDISNNKL 533
+++LDLSRNE+ + E+ L ++++L ++ N I ++ + L L + S N L
Sbjct: 214 IRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSL 273
Query: 534 KSFLDVESANLPHLTDLKLKSNLIESIPSCIGTK 635
S + A+ L ++ L N + +P I T+
Sbjct: 274 DSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTR 307
Score = 29.5 bits (63), Expect = 0.030
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Frame = +3
Query: 351 TTLRKLKVLDLSRNELKS--IPES-LNNMKELTSINFSSNQIE--DMPKIGDLPNLIIID 515
T L +L VL+L+ N L S + E+ + L +N S N + D DL L I+D
Sbjct: 306 TRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILD 365
Query: 516 ISNNKLKSFLDVESANLPHLTDLKLKSNLIESIPSCIGTKTFITQEL 656
+ NN + L +L L+L N + ++ + + F+ L
Sbjct: 366 LRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRL 412
Score = 25.0 bits (52), Expect = 0.64
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +3
Query: 285 NLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLN-NMKELTSINFSSN 461
++ +L L + N IE F+ LK LD+ N ++S+ ++ +++ S N
Sbjct: 547 SIASLLLLNLSENHIEWFDYAFIP-GNLKWLDIHGNFIESLGNYYKIRDSKVKTLDASHN 605
Query: 462 QIEDMPKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESI 614
+I ++ + ++ ++ I+NN + + +LT + + +N+IE++
Sbjct: 606 RITELSPLSVPDSVELLFINNNYINLVRPNTFTDKVNLTRVDMYANMIETM 656
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 27.1 bits (57), Expect = 0.16
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 297 LQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNM-----KELTSINFSSN 461
LQ L F K+ + N + L L L SI N M K L ++
Sbjct: 296 LQLLESFKRKVNFYPNNQDIEKFLNYLKRGGKTLTSISVESNTMFINILKFLKQKYVKNS 355
Query: 462 QIEDMPKIGDLPNLIIIDISNNKLKSFLDVES 557
++E + K D+ ++IID+ +LKS D E+
Sbjct: 356 KLEKVIK-HDILRMLIIDLRKKQLKSLEDWEN 386
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +3
Query: 363 KLKVLDLSRNELKSIPESLNNMKELT 440
++ ++DL + +LKS+ + N M +T
Sbjct: 367 RMLIIDLRKKQLKSLEDWENEMNIIT 392
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.2 bits (55), Expect = 0.28
Identities = 25/104 (24%), Positives = 41/104 (39%)
Frame = +2
Query: 200 RQKYLHLNKHKLIKHQ*YMSARYTR*NQELN*SPKLVNVWK*D*SF**KHNHTSKVKSPR 379
R + LH K KL++ + RY+R + S K ++ K+ TSK +S
Sbjct: 18 RYEKLHNEKEKLLEER-TSRKRYSRSREREQKSYKNEREYR-------KYRETSKERSQD 69
Query: 380 FIKKRIKKHPRELEQHERTNEYQFQLKSNRRYAENWRFTKLNNN 511
++ K P+ + +Y N Y N+ NNN
Sbjct: 70 RTERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYN-NNYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.2 bits (55), Expect = 0.28
Identities = 25/104 (24%), Positives = 41/104 (39%)
Frame = +2
Query: 200 RQKYLHLNKHKLIKHQ*YMSARYTR*NQELN*SPKLVNVWK*D*SF**KHNHTSKVKSPR 379
R + LH K KL++ + RY+R + S K ++ K+ TSK +S
Sbjct: 18 RYEKLHNEKEKLLEER-TSRKRYSRSREREQKSYKNEREYR-------KYRETSKERSQD 69
Query: 380 FIKKRIKKHPRELEQHERTNEYQFQLKSNRRYAENWRFTKLNNN 511
++ K P+ + +Y N Y N+ NNN
Sbjct: 70 RTERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYN-NNYNNN 112
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 0.64
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 489 DLPNLIIIDISNNKLKSFLDVESANLPHLT 578
D N++ +D+S K++ V A P+LT
Sbjct: 811 DKENILFLDLSTGKVEMITGVGKATSPNLT 840
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 344 KHNHTSKVKSPRFIK-KRIKKHPRELEQHERTNEYQFQLKSNRRYAEN 484
K HT+ K ++K KR K R +++ T EY+ + + ++A+N
Sbjct: 78 KQKHTAN-KVVNYLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKN 124
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 2.6
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +2
Query: 200 RQKYLHLNKHKLIKHQ*YMSARYTR*NQELN*SPKLVNVWK*D*SF**KHNHTSKVKSPR 379
R + LH K KL++ + RY+R + S K ++ K+ TSK +S
Sbjct: 251 RYEKLHNEKEKLLEER-TSRERYSRSREREQKSYKNEREYR-------KYGETSKERSRD 302
Query: 380 FIKKRIKKHPRELEQHERTNEYQFQLKSNRRYAENW-RFTKLNNN 511
++ K P+ + +N Y++ +N Y N+ + NNN
Sbjct: 303 RTERERSKEPKIIS--SLSNNYKYSNYNN--YNNNYNNYNNYNNN 343
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 344 KHNHTSKVKSPRFIK-KRIKKHPRELEQHERTNEYQFQLKSNRRYAEN 484
K HT+ K ++K KR K R +++ T EY+ + + ++A+N
Sbjct: 78 KQKHTAN-KVVNYLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKN 124
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 525 NKLKSFLDVESANLPHLTDLKLKSN 599
N LKSF+D+ +AN + + K N
Sbjct: 148 NVLKSFIDLFNANARSVVEKMRKEN 172
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 22.2 bits (45), Expect = 4.5
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 366 LKVLDLSRNELKSIPESLNNMKELTSINFSSNQIEDMPKIGDLPNLI 506
LKV++ L +I +NN + ++++ D KI D+ NL+
Sbjct: 72 LKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDI-NLL 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,639
Number of Sequences: 438
Number of extensions: 3530
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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