Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11n18
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   2.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   2.4  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   2.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.5  

>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +1

Query: 244 AALFDE--PSPAGSSTSRRDSQLTDRGYFDVK 333
           A +F E   SPAG S +      T R +FD++
Sbjct: 21  AVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQ 52


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +1

Query: 244 AALFDE--PSPAGSSTSRRDSQLTDRGYFDVK 333
           A +F E   SPAG S +      T R +FD++
Sbjct: 21  AVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQ 52


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +1

Query: 244 AALFDE--PSPAGSSTSRRDSQLTDRGYFDVK 333
           A +F E   SPAG S +      T R +FD++
Sbjct: 21  AVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQ 52


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 15  LFNMTCRLRYFNLR*VFN 68
           + NM C L Y N R V N
Sbjct: 168 MINMNCALWYINCRAVGN 185


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 15  LFNMTCRLRYFNLR*VFN 68
           + NM C L Y N R V N
Sbjct: 168 MINMNCALWYINCRAVGN 185


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 15  LFNMTCRLRYFNLR*VFN 68
           + NM C L Y N R V N
Sbjct: 168 MINMNCALWYINCRAVGN 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,258
Number of Sequences: 336
Number of extensions: 1916
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)