Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11n18
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061003-1|AAL28551.1|  461|Drosophila melanogaster HL01728p pro...    42   6e-04
AE014296-1649|AAN11969.1|  461|Drosophila melanogaster CG3967-PE...    42   6e-04
AE014296-1648|AAN11968.1|  461|Drosophila melanogaster CG3967-PD...    42   6e-04
AE014296-1647|AAN11967.1|  461|Drosophila melanogaster CG3967-PC...    42   6e-04
AE014296-1646|AAF50275.2|  461|Drosophila melanogaster CG3967-PA...    42   6e-04
AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p pro...    29   4.5  
AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1 ...    29   4.5  
AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA...    29   4.5  

>AY061003-1|AAL28551.1|  461|Drosophila melanogaster HL01728p
           protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 271 AGSSTSRRDSQLTDRGYFDVKFYHNKLW 354
           A S+ S     LTD+GY+D+KFYHNKLW
Sbjct: 434 AMSTVSSGGGGLTDQGYYDLKFYHNKLW 461


>AE014296-1649|AAN11969.1|  461|Drosophila melanogaster CG3967-PE,
           isoform E protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 271 AGSSTSRRDSQLTDRGYFDVKFYHNKLW 354
           A S+ S     LTD+GY+D+KFYHNKLW
Sbjct: 434 AMSTVSSGGGGLTDQGYYDLKFYHNKLW 461


>AE014296-1648|AAN11968.1|  461|Drosophila melanogaster CG3967-PD,
           isoform D protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 271 AGSSTSRRDSQLTDRGYFDVKFYHNKLW 354
           A S+ S     LTD+GY+D+KFYHNKLW
Sbjct: 434 AMSTVSSGGGGLTDQGYYDLKFYHNKLW 461


>AE014296-1647|AAN11967.1|  461|Drosophila melanogaster CG3967-PC,
           isoform C protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 271 AGSSTSRRDSQLTDRGYFDVKFYHNKLW 354
           A S+ S     LTD+GY+D+KFYHNKLW
Sbjct: 434 AMSTVSSGGGGLTDQGYYDLKFYHNKLW 461


>AE014296-1646|AAF50275.2|  461|Drosophila melanogaster CG3967-PA,
           isoform A protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 271 AGSSTSRRDSQLTDRGYFDVKFYHNKLW 354
           A S+ S     LTD+GY+D+KFYHNKLW
Sbjct: 434 AMSTVSSGGGGLTDQGYYDLKFYHNKLW 461


>AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p
           protein.
          Length = 608

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 187 AGVGPVPTRPSQLEMEEACAALFDEPSPAGSS 282
           +G  P P RPS + ++ +C+AL   P  AG +
Sbjct: 415 SGSSPPPRRPSPMNIQLSCSALAPPPLKAGGA 446


>AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1
           protein.
          Length = 526

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 187 AGVGPVPTRPSQLEMEEACAALFDEPSPAGSS 282
           +G  P P RPS + ++ +C+AL   P  AG +
Sbjct: 333 SGSSPPPRRPSPMNIQLSCSALAPPPLKAGGA 364


>AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA
           protein.
          Length = 608

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 187 AGVGPVPTRPSQLEMEEACAALFDEPSPAGSS 282
           +G  P P RPS + ++ +C+AL   P  AG +
Sbjct: 415 SGSSPPPRRPSPMNIQLSCSALAPPPLKAGGA 446


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,970,397
Number of Sequences: 53049
Number of extensions: 389443
Number of successful extensions: 751
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)