Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11n17
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.3  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.2  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   6.9  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   9.1  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 520 VVFALVQGSYIVTTEFWNKCLESIHNLSIPPDPQL 624
           V   + QGS +  T  WN   + + ++++PPD ++
Sbjct: 622 VTAGVPQGSILGPT-LWNTMYDGVLDIALPPDAEI 655


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = +1

Query: 538 QGSYIVTTEFWNKCLESIHNLSIPPDPQL--FTPEIIETTSNREI 666
           QGS +  T  WN     +  L +PP P++  F  +I  T     I
Sbjct: 603 QGSILGPT-LWNVMYNGVLTLGLPPGPEVIGFADDIALTVLGESI 646


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 502 LTLTIEVVFALVQGSYIVTTEFWNKCLESIHNLSIPPDPQLFTPEIIETTSN 657
           LT+TI VVF      Y+V T ++    ES   + +     LF   +  +  N
Sbjct: 308 LTITIVVVFVWCWTPYVVMTLWYMFDRESAAKVDVAVQDGLFLMAVSNSCMN 359


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 592 HNLSIPPDPQLFTPE 636
           H+ SI PDP+ F P+
Sbjct: 411 HDASIYPDPERFDPD 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,994
Number of Sequences: 2352
Number of extensions: 14248
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)