Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11n17
(689 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g47790.1 68418.m05903 forkhead-associated domain-containing p... 46 2e-05
At1g34355.1 68414.m04265 forkhead-associated domain-containing p... 45 4e-05
At4g14490.1 68417.m02234 forkhead-associated domain-containing p... 39 0.003
At5g67030.1 68418.m08450 zeaxanthin epoxidase (ZEP) (ABA1) ident... 38 0.008
At5g38840.1 68418.m04698 forkhead-associated domain-containing p... 35 0.058
At5g07400.1 68418.m00847 forkhead-associated domain-containing p... 32 0.41
At4g00460.1 68417.m00063 expressed protein contains Pfam profile... 31 0.72
At4g35630.1 68417.m05060 phosphoserine aminotransferase, chlorop... 29 2.9
At2g17630.1 68415.m02039 phosphoserine aminotransferase, putativ... 29 2.9
At5g22970.1 68418.m02685 expressed protein 28 5.1
At1g21830.1 68414.m02731 expressed protein EST gb|T21171 comes f... 28 6.7
At5g60380.1 68418.m07572 hypothetical protein many predicted pro... 27 8.9
At3g11420.1 68416.m01393 fringe-related protein similar to hypot... 27 8.9
>At5g47790.1 68418.m05903 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 369
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +1
Query: 61 MWYLRAENDERVL-YITPEKREVIIGRSPDKQICSFPIIDDSSLSRRHASLTLSSNNCLF 237
++ L D ++L I ++R I GR Q C F ++D S+SR+HA++ N +F
Sbjct: 65 VYSLEVVKDGQILDRIHLDRRRHIFGRQ--HQTCDF-VLDHQSVSRQHAAVVPHKNGSIF 121
Query: 238 VQDLDSKYGTFINDCTEKLT--TKVQLK 315
V DL S +GTF+ E+LT T V+L+
Sbjct: 122 VIDLGSAHGTFV--ANERLTKDTPVELE 147
>At1g34355.1 68414.m04265 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1477
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 124 VIIGRSPDKQICSFPIIDDSSLSRRHASL-TLSSNNCLFVQDLDSKYGTFINDCTEKLTT 300
+++GR PD I ++ S+SR H + ++SS LFV DL S +GT++ D +
Sbjct: 64 LVVGRHPDCDI----LLTHPSISRFHLEIRSISSRQKLFVTDLSSVHGTWVRDLRIEPHG 119
Query: 301 KVQLKSDDIVKLGKLNCIWRVYNLELVTCTSTFEKEN 411
V+++ D +++G R+Y L + + ++ +N
Sbjct: 120 CVEVEEGDTIRIGGST---RIYRLHWIPLSRAYDLDN 153
>At4g14490.1 68417.m02234 forkhead-associated domain-containing
protein / FHA domain-containing protein contains Pfam
domain, PF00498: forkhead-associated (FHA) domain
Length = 386
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 172 IDDSSLSRRHASLTLSSNNCLFVQDLDSKYGTFINDCTEKLTTKVQLKSDDIVKLGKLNC 351
I D+ +S +H + S N + +QDL S GT +N T V L D++KLG+
Sbjct: 41 IKDAGISTKHLRIESDSGNWV-IQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTS 99
Query: 352 I 354
I
Sbjct: 100 I 100
>At5g67030.1 68418.m08450 zeaxanthin epoxidase (ZEP) (ABA1)
identical to GI:9857296 AtABA1; controls Pfam profiles
PF01360: Monooxygenase and PF00498: FHA domain;
identical to cDNA AtABA1, GI:9857295
Length = 667
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +1
Query: 64 WYLRAENDE----RVLYITP-EKREVIIGRSPDKQICSFPIIDDSS-LSRRHASLTLSSN 225
WYL D+ L +T E + I+G PD+ I+ SS +S+ HA + + +
Sbjct: 533 WYLIPHGDDCCVSETLCLTKDEDQPCIVGSEPDQDFPGMRIVIPSSQVSKMHARV-IYKD 591
Query: 226 NCLFVQDLDSKYGTFIND 279
F+ DL S++GT++ D
Sbjct: 592 GAFFLMDLRSEHGTYVTD 609
>At5g38840.1 68418.m04698 forkhead-associated domain-containing
protein / FHA domain-containing protein related to
adaptor protein kanadaptin [Homo sapiens]
gi|13562130|gb|AAK29177
Length = 735
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 154 ICSFPIIDDSSLSRRHASLTLSSNNCLFVQDLDSKYGTFINDCTEKLTTKVQLKSDDIVK 333
IC F + + S+SR HA + + ++ DL S +GT +N V L D+++
Sbjct: 132 ICDFAL-EHPSISRFHAVIQYKRSGAAYIFDLGSTHGTTVNKNKVDKKVFVDLNVGDVIR 190
Query: 334 LG 339
G
Sbjct: 191 FG 192
>At5g07400.1 68418.m00847 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1084
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 97 LYITPEKREVIIGRSPDKQICSFPIIDDSSLSRRHASLTLSSNN 228
L+ R IGRS C F +ID SS+SR+H + S +
Sbjct: 31 LFHIQSDRPYTIGRSSSDGFCDF-VIDHSSISRKHCQILFDSQS 73
>At4g00460.1 68417.m00063 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 473
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 157 CSFPIIDDSSLSRRHASLTLSSNNCLFVQDL 249
C++P++ +S S+ + L + SN CL VQ++
Sbjct: 70 CNWPVLTESKSSKCLSGLEMQSNECLVVQEI 100
>At4g35630.1 68417.m05060 phosphoserine aminotransferase,
chloroplast (PSAT) identical to Phosphoserine
aminotransferase, chloroplast precursor (PSAT)
(SP:Q96255)[Arabidopsis thaliana]; contains TIGRFAM
TIGR01364: phosphoserine aminotransferase; contains Pfam
PF00266: aminotransferase, class V
Length = 430
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 296 VSFSVQSLMNVPYLESKSCTNKQLFEDSVKEACRLLSDESSIIG 165
V SV+SLMNVP+ KS + +++ KE L S+ G
Sbjct: 358 VEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGG 401
>At2g17630.1 68415.m02039 phosphoserine aminotransferase, putative
similar to Phosphoserine aminotransferase, chloroplast
precursor (PSAT) (SP:Q96255) [Arabidopsis thaliana];
contains TIGRFAM TIGR01364: phosphoserine
aminotransferase; contains Pfam PF00266:
aminotransferase, class V
Length = 422
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 296 VSFSVQSLMNVPYLESKSCTNKQLFEDSVKEACRLLSDESSIIG 165
V SV+SLMNVP+ KS + +++ KE L S+ G
Sbjct: 350 VEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGG 393
>At5g22970.1 68418.m02685 expressed protein
Length = 137
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = -1
Query: 305 TLVVSFSVQSLMNVPYLESKSCTNKQLFEDSVKEACRLLSDESSIIGKLHICLSGLRPII 126
TL+VS +Q+L NVP +C SV +++ + SI G + ++G R +
Sbjct: 16 TLIVSNEMQTLPNVPVF--VTCRPTPELSKSVPLGQKIMIEIPSIAGD-NEKVAGSRQLS 72
Query: 125 TSLFSGVMYNTLSS 84
+L G YN SS
Sbjct: 73 HTLCVGTFYNKKSS 86
>At1g21830.1 68414.m02731 expressed protein EST gb|T21171 comes from
this gene
Length = 206
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -1
Query: 482 PQLSSHSFFSCPPILSRIDLRWRRFSFSNVDVHVTSSR 369
P +S F+ +LSR+DLR R+F S+ D+ V++S+
Sbjct: 51 PIISLPKIFALSSLLSRLDLRHRKFHPSS-DLDVSTSQ 87
>At5g60380.1 68418.m07572 hypothetical protein many predicted
proteins, Arabidopsis thaliana contains Pfam profile
PF03080: Arabidopsis proteins of unknown function
Length = 373
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 184 SLSRRHASLTLSSNNCLFVQDLDSKYGTF-INDCTEKLTTKVQL 312
SLSR H +SNN + +D++ YGT + T++ TK QL
Sbjct: 69 SLSR-HELKNQTSNNKTYKKDIECPYGTIPVLRNTKEFNTKAQL 111
>At3g11420.1 68416.m01393 fringe-related protein similar to
hypothetical protein GB:AAC23643 [Arabidopsis thaliana]
+ weak similarity to Fringe [Schistocerca
gregaria](GI:6573138);Fringe encodes an extracellular
protein that regulates Notch signalling.
Length = 505
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 491 VK*PQLSSHSFFSCPPILSRIDLRWRRFSFSNVDVHVTSSRL*TRQMQLSFPN 333
VK P+ S FS P +S D W RF FS+ V +R+ +L+ PN
Sbjct: 132 VKIPENHSDVRFSIPTRVS--DPGWTRFKFSSSRAAVRIARIIWDSYRLNLPN 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,589,089
Number of Sequences: 28952
Number of extensions: 297250
Number of successful extensions: 734
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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