Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11n15
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    26   0.27 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.84 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    25   0.84 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.8  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   7.8  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   7.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.8  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 217 FLNSGSLRLCWSKYTQ*PKNSVPAIPTAI 131
           +  SGSL  CWS++TQ  +  +  I   I
Sbjct: 224 YKTSGSLYTCWSEFTQKTQGQIYGIKVDI 252


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 110 NHKNNVRYSCRNC 148
           +H N  RYSCR+C
Sbjct: 280 SHSNVYRYSCRDC 292


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 110 NHKNNVRYSCRNC 148
           +H N  RYSCR+C
Sbjct: 38  SHSNVYRYSCRDC 50


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +1

Query: 421 RLNNCLVYFSKL 456
           RL NC++YF+++
Sbjct: 143 RLKNCVIYFNRI 154


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 515 PILDEGEEQRNAGRRC 562
           P+LD+G   RN    C
Sbjct: 21  PLLDDGTRTRNKAAEC 36


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 122 NVRYSCRNCGNTV 160
           NV Y C  C NTV
Sbjct: 282 NVLYICNQCYNTV 294


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 446 KYTKQLFSLSTNSHSLPEMFDSSF 375
           ++  Q  +L T  H LPE+  S F
Sbjct: 42  EHVAQWINLVTQQHGLPEVPSSRF 65


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 446 KYTKQLFSLSTNSHSLPEMFDSSF 375
           ++  Q  +L T  H LPE+  S F
Sbjct: 42  EHVAQWINLVTQQHGLPEVPSSRF 65


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 542 RNAGRRCRIKNCE 580
           RN  R CR+K C+
Sbjct: 89  RNQCRACRLKKCQ 101


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 542 RNAGRRCRIKNCE 580
           RN  R CR+K C+
Sbjct: 89  RNQCRACRLKKCQ 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,393
Number of Sequences: 336
Number of extensions: 3420
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)