Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11n06
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 347 FASCYCLYVITFFP 306
           FA CYC Y I+  P
Sbjct: 551 FAFCYCYYSISIRP 564


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 231 CPNKTFSCNFAIF 193
           C  K+F  NFAIF
Sbjct: 108 CSKKSFRMNFAIF 120


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = +3

Query: 222 CWGNATHHELCIDG 263
           CW      +LCI G
Sbjct: 118 CWNGTATEQLCIGG 131


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 207 NFAIFFNSLN*LVITYTLSFSLKEWR*IYIFIV 109
           N  + FN+     I YTL FS+      YI I+
Sbjct: 617 NEQVEFNAAGFFAINYTLVFSILGGVTTYIIIL 649


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 207 NFAIFFNSLN*LVITYTLSFSLKEWR*IYIFIV 109
           N  + FN+     I YTL FS+      YI I+
Sbjct: 342 NEQVEFNAAGFFAINYTLVFSILGGVTTYIIIL 374


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 249 LCIDGSQITDLVIKPTLS 302
           LC+ G+++ D  IKP L+
Sbjct: 334 LCLFGAKVHDESIKPLLT 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,357
Number of Sequences: 336
Number of extensions: 3910
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)