Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11n06
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 96 2e-20
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_7970| Best HMM Match : RCC1 (HMM E-Value=0) 87 2e-17
SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16) 72 5e-13
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 69 3e-12
SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19) 69 4e-12
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_18907| Best HMM Match : RCC1 (HMM E-Value=0) 66 4e-11
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 63 2e-10
SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14) 59 3e-09
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 57 1e-08
SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041) 57 1e-08
SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08) 56 4e-08
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 50 1e-06
SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072) 45 5e-05
SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_5935| Best HMM Match : PvlArgDC (HMM E-Value=2.6) 33 0.17
SB_23006| Best HMM Match : RCC1 (HMM E-Value=0.014) 32 0.40
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 29 2.8
SB_25936| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 96.3 bits (229), Expect = 2e-20
Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Frame = +3
Query: 213 KMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVA--AGEFHSLYLSNSGHLY 386
+++ WG + L GS LV P L HI VA +G+ H+L ++ G ++
Sbjct: 615 ELYTWGRGNYGRLG-HGSSEDQLV--PVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 671
Query: 387 SCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSM 566
S G+ D G+LGR SD KNP +E + + + CG Q SLA+ G ++WG
Sbjct: 672 SWGDGDYGKLGRGG-SDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEG 730
Query: 567 GQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
+LG+ H + PK V+ L K+V+ V+ G+ H +ALT++G++Y W
Sbjct: 731 FRLGHGTEDHVRH-PKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCW 777
Score = 80.6 bits (190), Expect = 1e-15
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Frame = +3
Query: 213 KMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSC 392
+++ WG+ +L G T +PTL + ++ G HS +++ G LY+
Sbjct: 563 EVYSWGSGDGGKL---GHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTW 619
Query: 393 GNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGL--QHSLAIDEWGQPFSWGSDSM 566
G + G+LG + D P LV + I +ACG H+LA + G +SWG
Sbjct: 620 GRGNYGRLGHGSSEDQ-LVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDY 678
Query: 567 GQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
G+LG G+ PK ++ L V +V CGA S+ALT G +++W
Sbjct: 679 GKLGRG-GSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTW 725
Score = 76.6 bits (180), Expect = 2e-14
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Frame = +3
Query: 351 HSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDE 530
H L L+ G +YS G+ D G+LG S + P LV + I+CG HS A+
Sbjct: 554 HFLALTREGEVYSWGSGDGGKLGHGDTSPR-EEPTLVTGLAGKQVIRISCGSTHSAAVTS 612
Query: 531 WGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGA--YHSVALTNSGDLY 704
G+ ++WG + G+LG+ + Q P V GL ++I VACG+ H++A + G ++
Sbjct: 613 EGELYTWGRGNYGRLGHG-SSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 671
Query: 705 SW 710
SW
Sbjct: 672 SW 673
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Frame = +3
Query: 408 GQLGRQTESDNGKNPALVETF-KDCTISTIACGL--QHSLAIDEWGQPFSWGSDSMGQLG 578
G++ Q S G+ PA +E + C I + +H LA+ G+ +SWGS G+LG
Sbjct: 517 GKVYMQAYSHEGQPPAELECLSRKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLG 576
Query: 579 NNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
+ +++P V GLA K VI+++CG+ HS A+T+ G+LY+W
Sbjct: 577 HG-DTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTW 619
Score = 72.9 bits (171), Expect = 2e-13
Identities = 46/160 (28%), Positives = 81/160 (50%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
++ WG+ + +L GS D P + + + V G SL L+ G +++ G
Sbjct: 670 VWSWGDGDYGKLGRGGS---DGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWG 726
Query: 396 NNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQL 575
+ +LG TE D+ ++P LVE + ++ G H LA+ + G+ + WG + GQL
Sbjct: 727 KGEGFRLGHGTE-DHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQL 785
Query: 576 GNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSG 695
G ++ + +P V GLA+K ++ +ACG S A + +G
Sbjct: 786 G-DIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAG 824
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/108 (32%), Positives = 46/108 (42%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
++ WG L G D V P L + + H+ V+ G H L L+++G +Y G
Sbjct: 722 VWTWGKGEGFRL---GHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWG 778
Query: 396 NNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQ 539
ND GQLG + P LV I IACG S A GQ
Sbjct: 779 RNDQGQLG-DIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAGQ 825
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 86.6 bits (205), Expect = 2e-17
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 2/179 (1%)
Frame = +3
Query: 180 SSY*KKLQNYKKMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAG--EFH 353
SS+ + + +++ WG + L G T L KP + S + +A G +
Sbjct: 1583 SSHSAAILSSGELYTWGLGEYGRLG-HGDNYTHL--KPKKVQSFTSHRVIDIACGSRDAQ 1639
Query: 354 SLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEW 533
+L L++ G ++S G+ D G+LGR S+ P VE + + +ACG Q SLA+
Sbjct: 1640 TLALTDDGTVWSWGDGDFGKLGRGG-SEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTS 1698
Query: 534 GQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
G ++WG +LG+ H + KP+ V GL K ++ VA GA H +A+T+SG +++W
Sbjct: 1699 GLVWTWGKGDYYRLGHGNDTHVR-KPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAW 1756
Score = 86.6 bits (205), Expect = 2e-17
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 1/171 (0%)
Frame = +3
Query: 201 QNYKKMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQ-AVAAGEFHSLYLSNSG 377
QN++ ++ WG + L S+ D ++ + + + I A +G+ +L L++
Sbjct: 2536 QNHE-LYTWGKGRYGRLGHGDSE--DQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDD 2592
Query: 378 HLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGS 557
++S G+ D G+LGR SD K P VE+ +S + CG Q S+A+ G ++WG
Sbjct: 2593 CVWSWGDGDYGKLGRGG-SDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGK 2651
Query: 558 DSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
+LG+ + H + +PK V L K VI +A G+ H VA T++G++Y+W
Sbjct: 2652 GDYYRLGHGVDDHVR-RPKRVAALQGKKVITIATGSLHCVASTDTGEVYTW 2701
Score = 83.0 bits (196), Expect = 2e-16
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Frame = +3
Query: 330 AVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQ 509
+V +G H++ L+ G L+S G + G+LG N +P L++TFK + ++CG
Sbjct: 1526 SVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRM-NCDHPKLIDTFKSSCVRDMSCGSS 1584
Query: 510 HSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGA--YHSVAL 683
HS AI G+ ++WG G+LG+ + KPK V+ + VI +ACG+ ++AL
Sbjct: 1585 HSAAILSSGELYTWGLGEYGRLGHG-DNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLAL 1643
Query: 684 TNSGDLYSW 710
T+ G ++SW
Sbjct: 1644 TDDGTVWSW 1652
Score = 80.6 bits (190), Expect = 1e-15
Identities = 49/159 (30%), Positives = 81/159 (50%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
++ WG+ +L GS+ + P + + + VA G SL LS SG +++ G
Sbjct: 1649 VWSWGDGDFGKLGRGGSEGCSV---PNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWG 1705
Query: 396 NNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQL 575
D +LG ++ + + P +V+ + I +A G H LA+ + GQ F+WG + GQ
Sbjct: 1706 KGDYYRLGHGNDT-HVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQ 1764
Query: 576 GNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNS 692
GNN +P+ V GL + + +VACG+ HS+A S
Sbjct: 1765 GNNT-TTVNRRPQLVNGLEGQKITRVACGSSHSIAWAES 1802
Score = 71.7 bits (168), Expect = 5e-13
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Frame = +3
Query: 330 AVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQ 509
AV +G H++ LS G +YS G D G+LG + + P ++E + + I+CG
Sbjct: 2471 AVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDR-PRVIEALRGKGVIDISCGGS 2529
Query: 510 HSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGA--YHSVAL 683
HS I + + ++WG G+LG+ + Q PK V+ L VI VACG+ ++ L
Sbjct: 2530 HSACITQNHELYTWGKGRYGRLGHG-DSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCL 2588
Query: 684 TNSGDLYSW 710
T+ ++SW
Sbjct: 2589 TDDDCVWSW 2597
Score = 71.3 bits (167), Expect = 7e-13
Identities = 38/119 (31%), Positives = 64/119 (53%)
Frame = +3
Query: 324 IQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACG 503
+ V G S+ L+ SG +Y+ G D +LG + D+ + P V + + TIA G
Sbjct: 2627 VSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVD-DHVRRPKRVAALQGKKVITIATG 2685
Query: 504 LQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVA 680
H +A + G+ ++WG + GQLG+ +A +P+ V L K + +VACG+ H++A
Sbjct: 2686 SLHCVASTDTGEVYTWGDNDEGQLGDGT-TNAIARPRLVTALQGKKISRVACGSAHTIA 2743
Score = 67.7 bits (158), Expect = 9e-12
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Frame = +3
Query: 333 VAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIAC--GL 506
+ GE ++ G +Y+ G G+LG +D + ++E+ + + +A G
Sbjct: 2418 IVGGEQTLFAVTAEGKVYATGYGHGGRLGLGG-TDTVTSIKMLESLQHVVVRKVAVHSGG 2476
Query: 507 QHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALT 686
+H++A+ G +SWG G+LG+ ++ D+P+ ++ L K VI ++CG HS +T
Sbjct: 2477 KHAMALSADGDVYSWGEGDDGKLGHG-NRNSCDRPRVIEALRGKGVIDISCGGSHSACIT 2535
Query: 687 NSGDLYSW 710
+ +LY+W
Sbjct: 2536 QNHELYTW 2543
Score = 56.0 bits (129), Expect = 3e-08
Identities = 35/109 (32%), Positives = 53/109 (48%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
++ WG ++ L G V KP + I VA G H L +++SG +++ G
Sbjct: 1701 VWTWGKGDYYRL---GHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWG 1757
Query: 396 NNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQP 542
+ND GQ G T + N + P LV + I+ +ACG HS+A E P
Sbjct: 1758 DNDHGQQGNNTTTVN-RRPQLVNGLEGQKITRVACGSSHSIAWAESDLP 1805
Score = 55.2 bits (127), Expect = 5e-08
Identities = 30/102 (29%), Positives = 52/102 (50%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
++ WG ++ L G + D V +P + + +A G H + +++G +Y+ G
Sbjct: 2646 VYTWGKGDYYRL---GHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWG 2702
Query: 396 NNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLA 521
+ND GQLG T + + P LV + IS +ACG H++A
Sbjct: 2703 DNDEGQLGDGTTNAIAR-PRLVTALQGKKISRVACGSAHTIA 2743
Score = 48.0 bits (109), Expect = 8e-06
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +3
Query: 372 SGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSW 551
SG +Y G+N GQLG E K P +E I G Q A+ G+ ++
Sbjct: 2379 SGTIYGWGHNHRGQLG-SLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYAT 2437
Query: 552 GSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVA--CGAYHSVALTNSGDLYSW 710
G G+LG G K ++ L V +VA G H++AL+ GD+YSW
Sbjct: 2438 GYGHGGRLGLG-GTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSW 2491
Score = 44.4 bits (100), Expect = 9e-05
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +3
Query: 393 GNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQ 572
G ND QLG + K P L E + IA G + A+ G+ F+ G + G+
Sbjct: 1440 GLNDKDQLGG-LKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGR 1498
Query: 573 LGNNLGAHAQDKPKFVKGLATKNV--IQVACGAYHSVALTNSGDLYSW 710
LG + P+ ++ L++ V + V G H++ALT G L+SW
Sbjct: 1499 LGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSW 1546
>SB_7970| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 651
Score = 86.6 bits (205), Expect = 2e-17
Identities = 47/130 (36%), Positives = 71/130 (54%)
Frame = +3
Query: 321 HIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIAC 500
H+ AV+AG HSL L+ G ++S G G+LG E + P +E F + ++
Sbjct: 493 HVVAVSAGAAHSLALTADGSVWSWGWGASGRLGHGDEQNQLLLPKKIEAFAGQRVVAVSA 552
Query: 501 GLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVA 680
GL+HS A+ G +SWG + GQLG+ Q PK V+ A + V+ V+ GAYHS+A
Sbjct: 553 GLRHSGALTADGALWSWGEGAYGQLGHG-DEQRQLLPKKVEAFAGQRVVAVSAGAYHSLA 611
Query: 681 LTNSGDLYSW 710
++ G +W
Sbjct: 612 ISADGAFLTW 621
Score = 84.2 bits (199), Expect = 9e-17
Identities = 56/165 (33%), Positives = 81/165 (49%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
++ WG H +L QI L P + + AV+AG HSL ++ G L+S G
Sbjct: 409 VWSWGFGYHGQLGHGDQQIQLL---PKQIEAFAGLRVVAVSAGAAHSLAITADGALWSWG 465
Query: 396 NNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQL 575
D G+LG E D P VE F + ++ G HSLA+ G +SWG + G+L
Sbjct: 466 YGDSGRLGHGDEQDQ-LLPKKVEAFVGPHVVAVSAGAAHSLALTADGSVWSWGWGASGRL 524
Query: 576 GNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
G+ + PK ++ A + V+ V+ G HS ALT G L+SW
Sbjct: 525 GHGDEQNQLLLPKKIEAFAGQRVVAVSAGLRHSGALTADGALWSW 569
Score = 83.0 bits (196), Expect = 2e-16
Identities = 49/129 (37%), Positives = 69/129 (53%)
Frame = +3
Query: 324 IQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACG 503
+ AV+AG HS+ +S G ++S G+ D G+LG E N P E F + ++ G
Sbjct: 338 VVAVSAGSDHSIAISADGAVWSWGDGDFGKLGHGDEQ-NQLLPTKKEAFAGQRVVAVSAG 396
Query: 504 LQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVAL 683
HSLAI G +SWG GQLG+ Q PK ++ A V+ V+ GA HS+A+
Sbjct: 397 EYHSLAIIADGAVWSWGFGYHGQLGHG-DQQIQLLPKQIEAFAGLRVVAVSAGAAHSLAI 455
Query: 684 TNSGDLYSW 710
T G L+SW
Sbjct: 456 TADGALWSW 464
Score = 82.6 bits (195), Expect = 3e-16
Identities = 54/165 (32%), Positives = 82/165 (49%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
++ WG+ +L G + L+ PT + + AV+AGE+HSL + G ++S G
Sbjct: 357 VWSWGDGDFGKLG-HGDEQNQLL--PTKKEAFAGQRVVAVSAGEYHSLAIIADGAVWSWG 413
Query: 396 NNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQL 575
GQLG + P +E F + ++ G HSLAI G +SWG G+L
Sbjct: 414 FGYHGQLGHGDQQIQ-LLPKQIEAFAGLRVVAVSAGAAHSLAITADGALWSWGYGDSGRL 472
Query: 576 GNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
G+ Q PK V+ +V+ V+ GA HS+ALT G ++SW
Sbjct: 473 GHG-DEQDQLLPKKVEAFVGPHVVAVSAGAAHSLALTADGSVWSW 516
Score = 78.2 bits (184), Expect = 6e-15
Identities = 44/127 (34%), Positives = 72/127 (56%)
Frame = +3
Query: 330 AVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQ 509
+++AG H L L+ G ++S G+ G+LG ++ + P VE F + ++ G
Sbjct: 80 SMSAGAAHCLALTADGAVWSWGHGGQGRLGHG-DAQHQLLPKKVEAFAGQRVVAVSAGYF 138
Query: 510 HSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTN 689
HSLA+ G+ +SWG G+LG+ H Q PK ++GLA + V+ V+ G HS+A+T
Sbjct: 139 HSLALTADGRVWSWGYGRDGRLGHGNTQH-QLLPKKLEGLAGQRVVAVSAGIAHSLAITA 197
Query: 690 SGDLYSW 710
G ++SW
Sbjct: 198 DGSVWSW 204
Score = 74.9 bits (176), Expect = 6e-14
Identities = 49/166 (29%), Positives = 78/166 (46%)
Frame = +3
Query: 213 KMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSC 392
+++ WG L G T + P + + AV+AG HSL ++ G ++S
Sbjct: 148 RVWSWGYGRDGRL---GHGNTQHQLLPKKLEGLAGQRVVAVSAGIAHSLAITADGSVWSW 204
Query: 393 GNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQ 572
G G+LG E P +E F D + ++ G HSLA+ G F+WG + G+
Sbjct: 205 GWGGHGRLGHGEEKTQ-LLPKKIEAFADQRVVAVSAGSGHSLALTADGAVFTWGFGAHGR 263
Query: 573 LGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
LG+ H Q PK ++ + + V+ G HS+A+T G + SW
Sbjct: 264 LGHGDEQH-QLLPKKIEAFVGQRAVAVSAGPRHSLAITADGAVMSW 308
Score = 73.3 bits (172), Expect = 2e-13
Identities = 51/165 (30%), Positives = 76/165 (46%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
+F WG H L G + L+ P + AV+AG HSL ++ G + S G
Sbjct: 253 VFTWGFGAHGRLG-HGDEQHQLL--PKKIEAFVGQRAVAVSAGPRHSLAITADGAVMSWG 309
Query: 396 NNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQL 575
+ G+LG E N P VE + ++ G HS+AI G +SWG G+L
Sbjct: 310 HGHRGKLGHGDEQ-NQLLPNKVEALAGRRVVAVSAGSDHSIAISADGAVWSWGDGDFGKL 368
Query: 576 GNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
G+ Q P + A + V+ V+ G YHS+A+ G ++SW
Sbjct: 369 GHG-DEQNQLLPTKKEAFAGQRVVAVSAGEYHSLAIIADGAVWSW 412
Score = 51.6 bits (118), Expect = 6e-07
Identities = 36/100 (36%), Positives = 46/100 (46%)
Frame = +3
Query: 324 IQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACG 503
+ AV+AG HS L+ G L+S G GQLG E P VE F + ++ G
Sbjct: 547 VVAVSAGLRHSGALTADGALWSWGEGAYGQLGHGDEQRQ-LLPKKVEAFAGQRVVAVSAG 605
Query: 504 LQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVK 623
HSLAI G +WG G LG+ Q PK V+
Sbjct: 606 AYHSLAISADGAFLTWGQGEDGCLGHGEDLSDQLLPKKVE 645
>SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16)
Length = 390
Score = 71.7 bits (168), Expect = 5e-13
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Frame = +3
Query: 312 ESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVE--TFKDCTI 485
+ + +A G H+L ++ G L+S GN + GQLG + ++ P LV I
Sbjct: 120 QDGQVTHIACGSSHTLVITGDGRLFSWGNGNSGQLGIGS-TNTTLQPHLVPLGVTPGTRI 178
Query: 486 STIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLG----AHAQDKPKFVKGLATKNVIQV 653
+ACG +HS E G+ FS+G++ QLG + Q KP +V L + V+QV
Sbjct: 179 EGVACGTRHSFVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQV 238
Query: 654 ACGAYHSVALTNSG 695
ACG+ HS+ L ++G
Sbjct: 239 ACGSRHSLFLFSNG 252
Score = 65.7 bits (153), Expect = 4e-11
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Frame = +3
Query: 213 KMFCWGNATHHELCIDGSQITDLVIKPTLSKW--KESDHIQAVAAGEFHSLYLSNSGHLY 386
++F WGN +L I GS T+ ++P L I+ VA G HS + G +
Sbjct: 142 RLFSWGNGNSGQLGI-GS--TNTTLQPHLVPLGVTPGTRIEGVACGTRHSFVWTEEGECF 198
Query: 387 SCGNNDVGQLG---RQTE-SDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWG 554
S GNN QLG R+ + DN P V+T + + +ACG +HSL + G + G
Sbjct: 199 SFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGSRHSLFLFSNGHVAAVG 258
Query: 555 SDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
++ GQ+G +G + D V VACG H +A G +++W
Sbjct: 259 CNNRGQIG--IG-NKTDTFCIQNVPDLTGVTVVACGNSHCLAADVQGQVWAW 307
Score = 55.6 bits (128), Expect = 4e-08
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +3
Query: 219 FCWGNATHHELCIDGSQ--ITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSC 392
F +GN +L D + D +KP + + VA G HSL+L ++GH+ +
Sbjct: 198 FSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGSRHSLFLFSNGHVAAV 257
Query: 393 GNNDVGQLGRQTESDNGKNPALVETFKDCT-ISTIACGLQHSLAIDEWGQPFSWG 554
G N+ GQ+G ++D ++ D T ++ +ACG H LA D GQ ++WG
Sbjct: 258 GCNNRGQIGIGNKTDT----FCIQNVPDLTGVTVVACGNSHCLAADVQGQVWAWG 308
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +3
Query: 447 NPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVK- 623
NP LV +D ++ IACG H+L I G+ FSWG+ + GQLG + +P V
Sbjct: 114 NPLLVG--QDGQVTHIACGSSHTLVITGDGRLFSWGNGNSGQLGIG-STNTTLQPHLVPL 170
Query: 624 GLATKNVIQ-VACGAYHSVALTNSGDLYSW 710
G+ I+ VACG HS T G+ +S+
Sbjct: 171 GVTPGTRIEGVACGTRHSFVWTEEGECFSF 200
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +3
Query: 324 IQAVAAGEFHSLYLSNSGHLYSCGNN-----DVGQLGRQTESDN 440
++A++ G+ HS+ L ++G L + GNN + G L + ++DN
Sbjct: 333 VKALSGGDSHSMILLHNGRLLTVGNNYEVSDNKGDLKDRVQTDN 376
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/126 (30%), Positives = 68/126 (53%)
Frame = +3
Query: 333 VAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQH 512
V+ G+ H ++ Y+ G+N GQLG Q + N P LV+T K I+ CG ++
Sbjct: 89 VSVGQSHVAVVTLERAAYTWGDNSRGQLG-QGDLVNRDKPTLVDTLKGKAITRACCGDKY 147
Query: 513 SLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNS 692
S+ + + G + GS G LG+ + + +PK ++GL + +V V+CG +H + +
Sbjct: 148 SVFVTDNGIVMTCGSSDTGCLGHGDWS-STPRPKLIEGLLSVDVTAVSCGPHHVAVVCSE 206
Query: 693 GDLYSW 710
G +++W
Sbjct: 207 GLVFTW 212
Score = 60.1 bits (139), Expect = 2e-09
Identities = 36/138 (26%), Positives = 66/138 (47%)
Frame = +3
Query: 288 KPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVET 467
KPTL + I G+ +S++++++G + +CG++D G LG S + P L+E
Sbjct: 126 KPTLVDTLKGKAITRACCGDKYSVFVTDNGIVMTCGSSDTGCLGHGDWSSTPR-PKLIEG 184
Query: 468 FKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVI 647
++ ++CG H + G F+WG + G+LG + A ++
Sbjct: 185 LLSVDVTAVSCGPHHVAVVCSEGLVFTWGKGADGRLGLGNEDDQCVPCQVTMEDANVSIR 244
Query: 648 QVACGAYHSVALTNSGDL 701
V CG ++ LT++G L
Sbjct: 245 DVRCGLDGTMFLTDTGAL 262
Score = 55.6 bits (128), Expect = 4e-08
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 15/180 (8%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCG 395
+F WG L + + + T+ S I+ V G +++L+++G L +CG
Sbjct: 209 VFTWGKGADGRLGLGNEDDQCVPCQVTMEDANVS--IRDVRCGLDGTMFLTDTGALLACG 266
Query: 396 NNDVGQLG---RQTESDNGKN------------PALVETFKDCTISTIACGLQHSLAIDE 530
+N +LG RQ KN P V+ + +A G HS + E
Sbjct: 267 SNANNKLGLNNRQGFLMQMKNLLNKDPVKVTTTPTAVKALSRYRVVDMALGPTHSAVLVE 326
Query: 531 WGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
G + GS+ GQLG+ +D P VK L + V V CG +VA TN LY W
Sbjct: 327 PGHVHTLGSNQDGQLGSG-NTKPRDAPASVKQLEDQTVTMVFCGYGFTVAGTNDNTLYFW 385
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/89 (30%), Positives = 41/89 (46%)
Frame = +3
Query: 291 PTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETF 470
PT K + +A G HS L GH+++ G+N GQLG PA V+
Sbjct: 300 PTAVKALSRYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRDA-PASVKQL 358
Query: 471 KDCTISTIACGLQHSLAIDEWGQPFSWGS 557
+D T++ + CG ++A + WGS
Sbjct: 359 EDQTVTMVFCGYGFTVAGTNDNTLYFWGS 387
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +3
Query: 459 VETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATK 638
+ET + ++ G H + ++WG +S GQLG +DKP V L K
Sbjct: 78 IETPVRAQLGEVSVGQSHVAVVTLERAAYTWGDNSRGQLGQG-DLVNRDKPTLVDTLKGK 136
Query: 639 NVIQVACGAYHSVALTNSG 695
+ + CG +SV +T++G
Sbjct: 137 AITRACCGDKYSVFVTDNG 155
>SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19)
Length = 637
Score = 68.9 bits (161), Expect = 4e-12
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Frame = +3
Query: 324 IQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACG 503
+ + AG++ + + G +++CG G+LG +S N + +C + +++
Sbjct: 332 LSQIEAGQYCTFVIFPDGFVHACGKGSYGRLGLG-DSTNQTQLKRLNFDNECLVKSVSSS 390
Query: 504 LQ---HSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKG-LATKNVIQVACGAYH 671
H+LA+ G+ +SWG G+LG+ + Q PK V+G L K V +A G H
Sbjct: 391 KGSDGHTLALTLDGKVYSWGDGDYGKLGHG-NSQTQKIPKLVEGALGNKVVCCIAAGYRH 449
Query: 672 SVALTNSGDLYSW 710
S A+T G+LY+W
Sbjct: 450 SAAVTEDGELYTW 462
Score = 64.1 bits (149), Expect = 1e-10
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Frame = +3
Query: 213 KMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQA-VAAGEFHSLYLSNSGHLYS 389
K++ WG+ + +L SQ + P L + + + +AAG HS ++ G LY+
Sbjct: 405 KVYSWGDGDYGKLGHGNSQTQKI---PKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYT 461
Query: 390 CGNNDVGQLGR-----QTESDNGKNPA---------------LVETFKDCTISTIACGLQ 509
G D G+LG + S +G N + ++E + I + CG Q
Sbjct: 462 WGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQGMVIRKVCCGSQ 521
Query: 510 HSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTN 689
SLA+ GQ + WG LG PK + L + +V+ ++ G H VALT
Sbjct: 522 CSLALTSTGQVYVWGCGP--SLGTGSVDATSATPKLLLALQSHSVVDISVGDSHCVALTQ 579
Query: 690 SGDLYSW 710
++Y+W
Sbjct: 580 DNNVYAW 586
Score = 61.3 bits (142), Expect = 8e-10
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Frame = +3
Query: 351 HSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVE-TFKDCTISTIACGLQHSLAID 527
H+L L+ G +YS G+ D G+LG S K P LVE + + IA G +HS A+
Sbjct: 396 HTLALTLDGKVYSWGDGDYGKLGHGN-SQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT 454
Query: 528 EWGQPFSWGSDSMGQLGN------NLGAH----AQDKPKFVKGLATKNVI---------- 647
E G+ ++WG G+LG+ + H +++ P VK +A +
Sbjct: 455 EDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQGMVIR 514
Query: 648 QVACGAYHSVALTNSGDLYSW 710
+V CG+ S+ALT++G +Y W
Sbjct: 515 KVCCGSQCSLALTSTGQVYVW 535
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/121 (30%), Positives = 58/121 (47%)
Frame = +3
Query: 324 IQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACG 503
I+ V G SL L+++G +Y G LG + P L+ + ++ I+ G
Sbjct: 513 IRKVCCGSQCSLALTSTGQVYVWGCGP--SLGTGSVDATSATPKLLLALQSHSVVDISVG 570
Query: 504 LQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVAL 683
H +A+ + ++WG++SMGQ G KPK V GL V Q++ G H+VA
Sbjct: 571 DSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAW 630
Query: 684 T 686
T
Sbjct: 631 T 631
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 291 PTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETF 470
P L +S + ++ G+ H + L+ ++Y+ GNN +GQ G+ + P V
Sbjct: 553 PKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGL 612
Query: 471 KDCTISTIACGLQHSLA 521
+ I+ G H++A
Sbjct: 613 DGVAVHQISAGTSHTVA 629
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 66.9 bits (156), Expect = 2e-11
Identities = 43/127 (33%), Positives = 63/127 (49%)
Frame = +3
Query: 306 WKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTI 485
W D + ++ G+ HS ++ SGHLYS G GQLG ++++ P ++E
Sbjct: 31 WIRDDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLG-HGDAEDSHVPKIIEGLDVQKY 89
Query: 486 STIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGA 665
+ACG S AI E G+ ++WGS GQ N LG + + L K V V+CG
Sbjct: 90 KHLACGSDFSAAITENGELYTWGSCGEGQ--NGLGEDTEIPTRL--HLHGK-VRMVSCGY 144
Query: 666 YHSVALT 686
YH +T
Sbjct: 145 YHMAVVT 151
Score = 61.7 bits (143), Expect = 6e-10
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +3
Query: 471 KDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQ 650
+D + ++CG +HS + E G +S+G GQLG+ A PK ++GL +
Sbjct: 33 RDDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHG-DAEDSHVPKIIEGLDVQKYKH 91
Query: 651 VACGAYHSVALTNSGDLYSW 710
+ACG+ S A+T +G+LY+W
Sbjct: 92 LACGSDFSAAITENGELYTW 111
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 375 GHLYSCGNNDVGQLGRQTES-DNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSW 551
G LY CG + G+LG E DN +++ +D + ACG + + + + G +++
Sbjct: 335 GSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVV-VAACGAEFTAVVTKNGSVYTF 393
Query: 552 GSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
G + GQLG + P+ + V+CG + +T G+LY++
Sbjct: 394 GQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTF 446
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Frame = +3
Query: 318 DHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIA 497
D + A G + ++ +G +Y+ G + GQLG + + P + F+ T++
Sbjct: 369 DQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVS 428
Query: 498 CGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQD-KPKFVKGLATKNVIQVACGAYHS 674
CG + I + G +++G G+LG + KP+ VK V V CG H
Sbjct: 429 CGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCHM 488
Query: 675 VALTNSGD 698
+ D
Sbjct: 489 LVAAERKD 496
>SB_18907| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 444
Score = 65.7 bits (153), Expect = 4e-11
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Frame = +3
Query: 216 MFCWGNATHHELCIDGSQITDLVIK----PTLSKWKESDHIQAVAAGEFHSLYLSNSGHL 383
++ WG + +L Q +K L+K ++ HI +A G+ H++ +G +
Sbjct: 277 VYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHI-TIANGQHHTIVCDPNGKV 335
Query: 384 YSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDS 563
Y+ G D G+LG + PA + + + I +ACG S A+ + G+ +SWG S
Sbjct: 336 YALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACGECVSFAVSDKGELYSWGMGS 395
Query: 564 MGQLGNNLGAHAQDKPKFVKG----LATKNVIQVACGAYHSVAL 683
QLGN P V+G T V+ V+ G H+V L
Sbjct: 396 CLQLGNGNDEDDVTTPAKVQGKNLNSETHRVLGVSAGGQHTVIL 439
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = +3
Query: 372 SGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSW 551
SG + G DVGQLG ++ K PA+ + I + G H++A+ + G+ ++W
Sbjct: 48 SGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYTW 107
Query: 552 GSDSMGQLGNNLGAHAQD--KPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
G + G LG + ++ +P V N++ V+ G H+ AL++ G +Y+W
Sbjct: 108 GCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYAW 162
Score = 62.9 bits (146), Expect = 2e-10
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Frame = +3
Query: 282 VIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGH-LYSCGNNDVGQLGRQTESDNGKNPAL 458
+++P L + K+ + V G F + ++ +G +Y+ G N+ GQLG + P
Sbjct: 243 ILEPALVRSKKGLKFKDVFCGSFATFVVAKTGSDVYAWGLNNYGQLGTG-DVQTWHFPVK 301
Query: 459 VETFKDCTIS------TIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFV 620
V++ S TIA G H++ D G+ ++ G G+LG GA P +
Sbjct: 302 VKSLSQLNKSEKDKHITIANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHI 361
Query: 621 KGLATKNVIQVACGAYHSVALTNSGDLYSW 710
L + + +VACG S A+++ G+LYSW
Sbjct: 362 TSLDNEVIEKVACGECVSFAVSDKGELYSW 391
Score = 62.5 bits (145), Expect = 3e-10
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Frame = +3
Query: 174 ANSSY*KKLQNYKKMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFH 353
A S+ L + ++ WG I G Q + KP + ESD I +A+G H
Sbjct: 145 AGDSHTAALSDQGTVYAWGTYRDASGQI-GLQPDGVKKKPAVILTSESDRIIKIASGNDH 203
Query: 354 SLYLSNSGHLYSCGNNDVGQLGRQTESDNGK----------NPALVETFKDCTISTIACG 503
+ L+ SG+L++ G + GQLGR E + + PALV + K + CG
Sbjct: 204 TAALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCG 263
Query: 504 LQHSLAIDEWGQP-FSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNV------IQVACG 662
+ + + G ++WG ++ GQLG P VK L+ N I +A G
Sbjct: 264 SFATFVVAKTGSDVYAWGLNNYGQLGTG-DVQTWHFPVKVKSLSQLNKSEKDKHITIANG 322
Query: 663 AYHSVALTNSGDLYS 707
+H++ +G +Y+
Sbjct: 323 QHHTIVCDPNGKVYA 337
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 528 EWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYS 707
E GQ + G +GQLG + KP L ++QV G H+VAL+ G +Y+
Sbjct: 47 ESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYT 106
Query: 708 W 710
W
Sbjct: 107 W 107
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Frame = +3
Query: 321 HIQAVAAGEFHSLYLSNSGH-LYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIA 497
H VA G H+L LS G+ +++ G+ D G+LG + + +P ++ I
Sbjct: 1706 HSFQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAK-TSPQAIDVLAGIGCKKIC 1764
Query: 498 CGLQHSLAIDEWGQPFSWGSDSM-GQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHS 674
CG Q S+ + G+ FS+G + + GQ L KP+ ++ LA+ + V GA H
Sbjct: 1765 CGTQFSVVLTNDGRVFSFGQERLTGQPEGRL--RGPQKPQQIQALASHFIDDVCVGAEHV 1822
Query: 675 VALTNSGDLYSW 710
+ALT++G+++ W
Sbjct: 1823 LALTSTGEVWGW 1834
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +3
Query: 333 VAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNG-KNPALVETFKDCTISTIACGLQ 509
+ G S+ L+N G ++S G + G+ G + P ++ I + G +
Sbjct: 1763 ICCGTQFSVVLTNDGRVFSFGQERL--TGQPEGRLRGPQKPQQIQALASHFIDDVCVGAE 1820
Query: 510 HSLAIDEWGQPFSWGSDSMGQLGNNLG-AHAQDKPKFVKGLATKNVIQVACGAYHSVALT 686
H LA+ G+ + WGS+ GQLG LG ++AQ +P + L KN+ Q++ G HS A T
Sbjct: 1821 HVLALTSTGEVWGWGSNVDGQLG--LGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWT 1878
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = +3
Query: 219 FCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGN 398
+ WG H +L G + PT++K S Q V G+ + + +G + +CG
Sbjct: 1426 YLWGGGRHGQLAESGRGVN----VPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGE 1479
Query: 399 NDVGQLGRQTESDNGK-NP-ALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQ 572
G+LG D +P + ++ + I+T HSLA+ + G+ FSWG G+
Sbjct: 1480 GSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGK 1539
Query: 573 LGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSG 695
LG+ + Q +P+ ++ L + V+ + V T +G
Sbjct: 1540 LGHG-NSDRQRRPRQIEALRGEEVVNWTASSSRLVMATTAG 1579
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +3
Query: 288 KPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVET 467
KP + S I V G H L L+++G ++ G+N GQLG S+ + P ++
Sbjct: 1800 KPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGSNVDGQLG-LGHSNAQREPCVIPD 1858
Query: 468 FKDCTISTIACGLQHSLA 521
K I I+ G HS A
Sbjct: 1859 LKGKNIRQISAGRNHSAA 1876
Score = 36.7 bits (81), Expect = 0.019
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 408 GQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLG--N 581
G+ G+ ES G N V T + + CG + + G + G S G+LG N
Sbjct: 1431 GRHGQLAESGRGVNVPTV-TKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGN 1489
Query: 582 NLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
+ ++G + HS+ALT+SG+++SW
Sbjct: 1490 SDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSW 1532
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 62.9 bits (146), Expect = 2e-10
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 25/166 (15%)
Frame = +3
Query: 288 KPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVET 467
+P +S I VA G H++ L+ + +++ G+N+ GQLG + + ++PA +
Sbjct: 26 EPKISPLSLPHGISKVALGTAHTVLLTFNHEVFAFGDNNFGQLGFG-DRNRRRDPAKLPF 84
Query: 468 FKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLG-----NNLGAHAQDKPKFVKGLA 632
F+ + IACG QHS+ + + G+ ++WG S GQ G NN A K F +
Sbjct: 85 FEGKRVVDIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMK 144
Query: 633 TKNVI--------------------QVACGAYHSVALTNSGDLYSW 710
+ + +ACG H++AL++ G +++W
Sbjct: 145 SPQSVFHLSEEKHETQPQATDVKIKSIACGDCHTLALSSRGTVWAW 190
Score = 56.0 bits (129), Expect = 3e-08
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Frame = +3
Query: 312 ESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNG--------------KN 449
E + +A G HS+ L ++G Y+ G++ GQ G +N K+
Sbjct: 86 EGKRVVDIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKS 145
Query: 450 PALV--------ETFKDCT---ISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAH 596
P V ET T I +IACG H+LA+ G ++WG Q G+
Sbjct: 146 PQSVFHLSEEKHETQPQATDVKIKSIACGDCHTLALSSRGTVWAWGLGC--QTGHGSLNS 203
Query: 597 AQDKPKFVKGLATKNVIQVACGAYHSVAL 683
+PK V+ L K VI + CGAYHS+AL
Sbjct: 204 IVSRPKMVEALKDKEVIGIICGAYHSIAL 232
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +3
Query: 360 YLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQ 539
YL S CG + + T S + P LVE I +A G HSLA+ + Q
Sbjct: 532 YLRQSSSCNKCGVSGICLCSGTTGSQDRSVPCLVEDLSSTGIIKVAAGTFHSLALTVYSQ 591
Query: 540 PFS 548
FS
Sbjct: 592 CFS 594
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 588 GAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYS 707
G+ + P V+ L++ +I+VA G +HS+ALT +S
Sbjct: 555 GSQDRSVPCLVEDLSSTGIIKVAAGTFHSLALTVYSQCFS 594
>SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14)
Length = 350
Score = 59.3 bits (137), Expect = 3e-09
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 24/166 (14%)
Frame = +3
Query: 285 IKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKN-PALV 461
+ + + K + +QA + G H+L L+++G ++ G+N +GQ+G+ + P +
Sbjct: 18 VPKVIDRLKMHNIVQA-SCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQI 76
Query: 462 ETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNN-----------LGAHAQDK 608
D ++ + CG + S+ +DE G FS+GS GQLG+N +G +
Sbjct: 77 MHPTDKKVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVL 136
Query: 609 PK------------FVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
P+ FV + + V CG H++AL G +++W
Sbjct: 137 PRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTW 182
Score = 54.4 bits (125), Expect = 9e-08
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +3
Query: 399 NDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLG 578
ND GQLG T ++ P +++ K I +CG H+L + + G F +G + +GQ+G
Sbjct: 3 NDKGQLGHGT-TERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQIG 61
Query: 579 N-NLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
+ + P + K V +V CGA S+ L +GD++S+
Sbjct: 62 QGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSF 106
Score = 48.8 bits (111), Expect = 4e-06
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 24/153 (15%)
Frame = +3
Query: 324 IQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTE-----SDNGKN----------PAL 458
+ V G S+ L +G ++S G+ + GQLG T+ S N
Sbjct: 84 VTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVF 143
Query: 459 VETFKD--------CTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPK 614
VE KD I + CG H++A+DE G+ F+WG G+LG+ + P+
Sbjct: 144 VERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQ-QPKDEHVPR 202
Query: 615 FVKGLATK-NVIQVACGAYHSVALTNSGDLYSW 710
+ TK N + G+ +S+A+ G LY W
Sbjct: 203 LLTFFNTKGNPSVIFAGSTYSMAVC-MGQLYFW 234
Score = 32.7 bits (71), Expect = 0.30
Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 4/164 (2%)
Frame = +3
Query: 198 LQNYKKMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSG 377
L ++F WG + L Q D + L+ + + + AG +S+ + G
Sbjct: 173 LDEQGRVFTWGFGGYGRL--GHQQPKDEHVPRLLTFFNTKGNPSVIFAGSTYSMAVC-MG 229
Query: 378 HLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWG- 554
LY G + + P V+ + ++ C + S+ I SWG
Sbjct: 230 QLYFWGQT-------KQSGEAAMYPKPVQDLSGWQVRSVGCS-KSSIVIAADDSVVSWGP 281
Query: 555 SDSMGQLGNNL---GAHAQDKPKFVKGLATKNVIQVACGAYHSV 677
S + G+LG L G + PK V+ L V V CG H++
Sbjct: 282 SPTYGELGYGLKKGGQKSSTNPKIVEPLEDIYVHSVTCGMGHTL 325
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 408 GQLGRQTESDNGK---NPALVETFKDCTISTIACGLQHSLAI 524
G+LG + K NP +VE +D + ++ CG+ H+L I
Sbjct: 286 GELGYGLKKGGQKSSTNPKIVEPLEDIYVHSVTCGMGHTLFI 327
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +3
Query: 375 GHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWG 554
G L+S G ND GQLG + V + + IS +ACG HS A+ E G+ F G
Sbjct: 241 GALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEKGRMFCCG 300
Query: 555 SDSMGQLGNNLGAHAQDKPKFVKGLATK-----NVIQVACGAYHSVALT 686
++ GQLG +L + D + + + + VACG H+ +T
Sbjct: 301 DNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVT 349
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +3
Query: 315 SDH-IQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGK----NPAL-VETFKD 476
S+H I VA G FHS L+ G ++ CG+N GQLG + N A+ V D
Sbjct: 273 SEHKISRVACGSFHSAALAEKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTD 332
Query: 477 CTISTIACGLQHSLAIDE 530
+ACG H+ + E
Sbjct: 333 FRCVHVACGDSHTAVVTE 350
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 534 GQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLY 704
G FS+G + GQLG + V L+ + +VACG++HS AL G ++
Sbjct: 241 GALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEKGRMF 297
>SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041)
Length = 234
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/121 (30%), Positives = 58/121 (47%)
Frame = +3
Query: 324 IQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACG 503
I+ V G SL L+++G +Y G LG + P L+ + ++ I+ G
Sbjct: 10 IRKVCCGSQCSLALTSTGQVYVWGCGP--SLGTGSVDATSATPKLLLALQSHSVVDISVG 67
Query: 504 LQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVAL 683
H +A+ + ++WG++SMGQ G KPK V GL V Q++ G H+VA
Sbjct: 68 DSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAW 127
Query: 684 T 686
T
Sbjct: 128 T 128
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +3
Query: 456 LVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLAT 635
++E + I + CG Q SLA+ GQ + WG LG PK + L +
Sbjct: 1 VIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGP--SLGTGSVDATSATPKLLLALQS 58
Query: 636 KNVIQVACGAYHSVALTNSGDLYSW 710
+V+ ++ G H VALT ++Y+W
Sbjct: 59 HSVVDISVGDSHCVALTQDNNVYAW 83
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 291 PTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETF 470
P L +S + ++ G+ H + L+ ++Y+ GNN +GQ G+ + P V
Sbjct: 50 PKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGL 109
Query: 471 KDCTISTIACGLQHSLA 521
+ I+ G H++A
Sbjct: 110 DGVAVHQISAGTSHTVA 126
>SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08)
Length = 970
Score = 55.6 bits (128), Expect = 4e-08
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 23/188 (12%)
Frame = +3
Query: 213 KMFCWGNATHHELCID--GSQITDLVIKPTLSKW----KESDHIQAVAAGEFHSLYLSNS 374
K WG + L I+ S I L ++ TL K + I+A+ AG+ ++ + S
Sbjct: 70 KALTWGYSPQGALGIEHLASLIVPLPVEVTLEKTVLQIETLYSIKAIGAGQHYACAIMTS 129
Query: 375 GHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDE---W---- 533
G +Y+ G + + E+ K P +V+ + + ++ACG H++ + E W
Sbjct: 130 GWMYAWGLSGAAK----DETKFVKTPTVVKGVDNARVMSMACGAYHTVLLAEGYGWLGNL 185
Query: 534 --GQPFSWGSDSMGQLGNNLGAHAQDKPKFVK--------GLATKNVIQVACGAYHSVAL 683
G +SWG G LG+ + +P +VK G K V QVA G HS L
Sbjct: 186 SSGVAYSWGRGGNGALGHGT-LLSLARPSYVKRLYHGDKDGKDAKTVSQVAAGRAHSAFL 244
Query: 684 TNSGDLYS 707
T G +Y+
Sbjct: 245 TKDGCVYT 252
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 309 KESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVE 464
K++ + VAAG HS +L+ G +Y+CG+N GQLG T+ P V+
Sbjct: 226 KDAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLGYYTKETYKLLPTKVD 277
Score = 40.3 bits (90), Expect = 0.002
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Frame = +3
Query: 273 TDLVIKPTLSKWKESDHIQAVAAGEFHSLYLS---------NSGHLYSCGNNDVGQLGRQ 425
T V PT+ K ++ + ++A G +H++ L+ +SG YS G G LG
Sbjct: 145 TKFVKTPTVVKGVDNARVMSMACGAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHG 204
Query: 426 TESDNGKNPALVETF-------KDC-TISTIACGLQHSLAIDEWGQPFSWGSDSMGQLG 578
T + P+ V+ KD T+S +A G HS + + G ++ GS+ GQLG
Sbjct: 205 TLLSLAR-PSYVKRLYHGDKDGKDAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLG 262
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +3
Query: 480 TISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVAC 659
+I I G ++ AI G ++WG + P VKG+ V+ +AC
Sbjct: 112 SIKAIGAGQHYACAIMTSGWMYAWGLSGAAKDETKF----VKTPTVVKGVDNARVMSMAC 167
Query: 660 GAYHSVALTNSGDLYSW 710
GAYH+V L Y W
Sbjct: 168 GAYHTVLLAEG---YGW 181
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 627 LATKNVIQVACGAYHSVALTNSGDL 701
L +K ++Q+ACGA+H ALT+SG+L
Sbjct: 488 LDSKIIVQIACGAFHVAALTDSGEL 512
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 312 ESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTIST 491
+S I +A G FH L++SG L +CG GQLG T + V K ++
Sbjct: 489 DSKIIVQIACGAFHVAALTDSGELLTCGTGKHGQLG-HTHMRSSDEFQTVLLSKVERFAS 547
Query: 492 IACGLQHSLAIDEWGQ 539
++CG+ + WGQ
Sbjct: 548 VSCGIAYF-----WGQ 558
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 483 ISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATK--NVIQVA 656
I IACG H A+ + G+ + G+ GQLG+ H + +F L +K V+
Sbjct: 493 IVQIACGAFHVAALTDSGELLTCGTGKHGQLGH---THMRSSDEFQTVLLSKVERFASVS 549
Query: 657 CG 662
CG
Sbjct: 550 CG 551
>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 51.6 bits (118), Expect = 6e-07
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Frame = +3
Query: 372 SGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQH------------- 512
+G +++ G+N QLG ++ G P+L+ +F+ I+ +ACG H
Sbjct: 112 NGEVFTWGHNGYSQLGNGN-TNQGLYPSLLTSFQGKNITQLACGSHHTLVLNDEGEILCG 170
Query: 513 ---SLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVAL 683
SLA+ + G +SWG++S GQLG AH K I + + S A
Sbjct: 171 YAHSLALSDAGCIYSWGANSYGQLGTGNKAHLVTPTKIAVDKGRFVEIGASHYIHMSAAA 230
Query: 684 TNSGDLYSW 710
T +G +Y W
Sbjct: 231 TATGKVYMW 239
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 528 EWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDL 701
E G+ F+WG + QLGN + P + KN+ Q+ACG++H++ L + G++
Sbjct: 111 ENGEVFTWGHNGYSQLGNG-NTNQGLYPSLLTSFQGKNITQLACGSHHTLVLNDEGEI 167
Score = 34.7 bits (76), Expect = 0.075
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 333 VAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQH 512
+ G HSL LS++G +YS G N GQLG ++ + P + K + A H
Sbjct: 167 ILCGYAHSLALSDAGCIYSWGANSYGQLGTGNKA-HLVTPTKIAVDKGRFVEIGASHYIH 225
Query: 513 -SLAIDEWGQPFSWG 554
S A G+ + WG
Sbjct: 226 MSAAATATGKVYMWG 240
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
Frame = +3
Query: 213 KMFCWGNATHHELCIDGSQITDLVIKPTLSKWKESDHIQAVAAGEFHSLYLSNSGHLYSC 392
++F WG + L GSQ P E ++V G S ++ L +C
Sbjct: 493 EVFAWGRGDNGRLGT-GSQ--QEYWSPKAISLPEGMRARSVHCGVDCSFAITLENKLLAC 549
Query: 393 GNNDVGQLGRQTESDNGKNPAL-----VETFKDCTISTIACGLQHSLAIDEWGQPFSWGS 557
G+N +L E + A+ V F S++A G H+L + + G+ +S+GS
Sbjct: 550 GSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLVLLQNGKLYSFGS 609
Query: 558 DSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTN 689
+S GQLG + P+ V+ L +V VACG SVA+++
Sbjct: 610 NSFGQLG-YVREGVSRFPQLVESL--NDVSYVACGDTFSVAVSS 650
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/108 (26%), Positives = 45/108 (41%)
Frame = +3
Query: 363 LSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQP 542
L++ G L + G+ G LG T ++ +VE + I+CG H +A+ +
Sbjct: 436 LTDRGILMTFGSGTYGCLGHGT-TNYVSQAKIVEDLLGFEVEDISCGSSHIMAVTADHEV 494
Query: 543 FSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALT 686
F+WG G+LG PK + V CG S A+T
Sbjct: 495 FAWGRGDNGRLGTG-SQQEYWSPKAISLPEGMRARSVHCGVDCSFAIT 541
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +3
Query: 546 SWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYSW 710
++GS + G LG+ + + K V+ L V ++CG+ H +A+T ++++W
Sbjct: 444 TFGSGTYGCLGHGTTNYVS-QAKIVEDLLGFEVEDISCGSSHIMAVTADHEVFAW 497
>SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072)
Length = 677
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +3
Query: 483 ISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACG 662
+ ++ACG++H+LA+ D +GQ + H +P +V L+ K I V CG
Sbjct: 29 VLSVACGIEHTLALCR---------DGLGQ--GDTQQHT--RPVYVTELSDKKCIAVVCG 75
Query: 663 AYHSVALTNSGDLYSW 710
YHS+AL+ +YSW
Sbjct: 76 HYHSLALSADQQVYSW 91
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/88 (32%), Positives = 38/88 (43%)
Frame = +3
Query: 423 QTESDNGKNPALVETFKDCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQ 602
Q ++ P V D + CG HSLA+ Q +SWG GQLG + A
Sbjct: 49 QGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDAL 108
Query: 603 DKPKFVKGLATKNVIQVACGAYHSVALT 686
P V L+ V Q+A G H+ LT
Sbjct: 109 -LPSHVTSLSGAFVTQLAAGYSHTAVLT 135
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3
Query: 330 AVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVETFKDCTISTIACGLQ 509
AV G +HSL LS +YS G GQLG + D P+ V + ++ +A G
Sbjct: 71 AVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIED-ALLPSHVTSLSGAFVTQLAAGYS 129
Query: 510 HSLAI 524
H+ +
Sbjct: 130 HTAVL 134
>SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 45.2 bits (102), Expect = 5e-05
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +3
Query: 273 TDLVIKPTL-SKWKESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLG-RQTESDNGK 446
TD VIKP + S WK D + + G H+ +++S LY+CG N+ GQLG T +
Sbjct: 72 TDDVIKPAVHSNWK--DDVLCITGGGGHTAMITDSRELYTCGWNNRGQLGLGDTINRIEL 129
Query: 447 NPALVETFKDCTISTIACGLQHSLAI 524
+ L+ K ++CG H+LAI
Sbjct: 130 HRVLIPPVKH-----VSCGWNHTLAI 150
Score = 34.7 bits (76), Expect = 0.075
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 312 ESDHIQAVAAGEFHSLYLSNSGHLYSCGNNDVGQLGRQTESDNGKNPALVE-TFKDCTIS 488
+ D A+ + Y G ++S G+N GQLG E P V+ +F+ C
Sbjct: 276 DEDDADDKASDDDFCFYFLADGSVWSWGDNKKGQLGCSRERSKKCIPFPVQVSFEGCRGK 335
Query: 489 TIACGLQHSLAI 524
+IA GL H++ +
Sbjct: 336 SIAVGLHHTVLL 347
>SB_5935| Best HMM Match : PvlArgDC (HMM E-Value=2.6)
Length = 363
Score = 33.5 bits (73), Expect = 0.17
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Frame = +3
Query: 312 ESDHIQAVAAGEFHSLYLSNSGHLYSCGNND------VGQLGRQTESDNGKNPALVETFK 473
E Q +AA + + G LY D +G G T ++ AL E
Sbjct: 233 ECPRFQYIAAMHSELIAVGVDGRLYQWRWQDPAPSPGIGAAGTVTFHPRARDLALAE--- 289
Query: 474 DCTISTIACGLQHSLAIDEWGQPFSWGSDSMGQLGNNLGAHAQDKPKFVKGLATKNVIQV 653
+ I+ A ++ S+ + E G+ SW DS+ + + L AQ P+ LA ++ +
Sbjct: 290 EKVIAIAASSIRASV-LTESGKVASWIDDSLAHVASKLEHSAQSFPE----LANDKIMSI 344
Query: 654 -ACGAYHSVALTNSGDLY 704
AC Y + A T SG LY
Sbjct: 345 YACDLY-TCAQTTSGALY 361
>SB_23006| Best HMM Match : RCC1 (HMM E-Value=0.014)
Length = 52
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 567 GQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYS 707
G+LG G+ P V+ L V +V CG+ SVALT SG +Y+
Sbjct: 6 GKLGRG-GSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYT 51
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
Frame = +3
Query: 288 KPTLSKWK------ESDHIQAVAAGEFHSLYLSNS----GHLYSC-GNNDVGQLGRQTE 431
KPT++ WK + H++ + G +H+LY+ S Y C NDVG R E
Sbjct: 1537 KPTVTWWKNGKELRDGKHVEIRSGGTYHTLYILRSEEEDAGSYKCLARNDVGSAERLFE 1595
>SB_25936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 655 ATCITFLVANPLTNLGLS*A*APRLLPSCPILSEPQLKGCPHSSIA 518
A C+TF+V P+T ++ R+ S + +P C H+S+A
Sbjct: 37 AICVTFIVFQPMTAQDITAVTQRRVRKSVTLDGDPLESTCRHASLA 82
>SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 558 DSMGQLGNNLGAHAQDKPKFVKGLATKNVIQVACGAYHSVALTNSGDLYS 707
D+ L N + H Q + K+ +GL+ + + VA G + G L S
Sbjct: 246 DTQAVLDNEMTHHRQVRKKYKRGLSVTHAVSVASGVAAGALSSAGGSLGS 295
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,872,520
Number of Sequences: 59808
Number of extensions: 457645
Number of successful extensions: 1075
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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