Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11n05
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010005-1|AAQ22474.1|  513|Drosophila melanogaster RE28239p pro...    30   3.6  
AE013599-1365|AAF58603.2| 1025|Drosophila melanogaster CG13188-P...    30   3.6  
AE013599-1364|AAM68700.2|  513|Drosophila melanogaster CG13188-P...    30   3.6  
BT003503-1|AAO39507.1|  765|Drosophila melanogaster RE38148p pro...    29   4.8  
AE014297-3832|AAF56490.2|  765|Drosophila melanogaster CG31096-P...    29   4.8  

>BT010005-1|AAQ22474.1|  513|Drosophila melanogaster RE28239p
           protein.
          Length = 513

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +1

Query: 460 NKDTNIDIVDAILMPEPNSSLNTNKFVKLWKSKFFITTSVRSLQRYFGKSRGADSIC 630
           N++T+I    A ++  PN +L + K VKL+  K F +   R L+R +   R  ++ C
Sbjct: 148 NEETSIG---AEILKLPNQALESEKIVKLFDMKKFQSNVNRELRRAYPDRRRLETQC 201


>AE013599-1365|AAF58603.2| 1025|Drosophila melanogaster CG13188-PA,
           isoform A protein.
          Length = 1025

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +1

Query: 460 NKDTNIDIVDAILMPEPNSSLNTNKFVKLWKSKFFITTSVRSLQRYFGKSRGADSIC 630
           N++T+I    A ++  PN +L + K VKL+  K F +   R L+R +   R  ++ C
Sbjct: 148 NEETSIG---AEILKLPNQALESEKIVKLFDMKKFQSNVNRELRRAYPDRRRLETQC 201


>AE013599-1364|AAM68700.2|  513|Drosophila melanogaster CG13188-PB,
           isoform B protein.
          Length = 513

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +1

Query: 460 NKDTNIDIVDAILMPEPNSSLNTNKFVKLWKSKFFITTSVRSLQRYFGKSRGADSIC 630
           N++T+I    A ++  PN +L + K VKL+  K F +   R L+R +   R  ++ C
Sbjct: 148 NEETSIG---AEILKLPNQALESEKIVKLFDMKKFQSNVNRELRRAYPDRRRLETQC 201


>BT003503-1|AAO39507.1|  765|Drosophila melanogaster RE38148p
           protein.
          Length = 765

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 123 LLIVIWVCFELNVSIKVLAYLSTFSLPLET 34
           +++ IWV F  N+S  + A+L  F LPL +
Sbjct: 668 IVMKIWVFFNYNISDDIYAWLVVFVLPLNS 697


>AE014297-3832|AAF56490.2|  765|Drosophila melanogaster CG31096-PA
           protein.
          Length = 765

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 123 LLIVIWVCFELNVSIKVLAYLSTFSLPLET 34
           +++ IWV F  N+S  + A+L  F LPL +
Sbjct: 668 IVMKIWVFFNYNISDDIYAWLVVFVLPLNS 697


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,549,680
Number of Sequences: 53049
Number of extensions: 519867
Number of successful extensions: 1546
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)