Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11n03
(724 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 29 0.050
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 29 0.050
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 27 0.15
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 2.5
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 2.5
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 2.5
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 23 2.5
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 22 4.4
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 5.8
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 7.6
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 7.6
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 28.7 bits (61), Expect = 0.050
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2
Query: 477 GCSVTSGTLRSR*SMAAATLASPTARGADTYGAAVVAARTTPA 349
GC+ T G + S+ SMA A P G T+GA++ T PA
Sbjct: 54 GCNET-GFINSQPSMAEFMTALPHLSGDMTHGASISPQNTPPA 95
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 28.7 bits (61), Expect = 0.050
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2
Query: 477 GCSVTSGTLRSR*SMAAATLASPTARGADTYGAAVVAARTTPA 349
GC+ T G + S+ SMA A P G T+GA++ T PA
Sbjct: 54 GCNET-GFINSQPSMAEFMTALPHLSGDMTHGASISPQNTPPA 95
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 27.1 bits (57), Expect = 0.15
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 295 INCSDLPNSSFNGRDS 248
+NC DLPNS N R+S
Sbjct: 74 LNCRDLPNSRCNSRES 89
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 650 HGVDYGATYAMQLLDHYLPPVGAQ 721
+G YG Y QL H+ PP+ Q
Sbjct: 77 NGYGYGNYYHPQLHSHHGPPIHHQ 100
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 650 HGVDYGATYAMQLLDHYLPPVGAQ 721
+G YG Y QL H+ PP+ Q
Sbjct: 77 NGYGYGNYYHPQLHSHHGPPIHHQ 100
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 650 HGVDYGATYAMQLLDHYLPPVGAQ 721
+G YG Y QL H+ PP+ Q
Sbjct: 77 NGYGYGNYYHPQLHSHHGPPIHHQ 100
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 650 HGVDYGATYAMQLLDHYLPPVGAQ 721
+G YG Y QL H+ PP+ Q
Sbjct: 77 NGYGYGNYYHPQLHSHHGPPIHHQ 100
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 286 SNLFKSQRCPLTSRMGSIDR*SWS 357
S L SQ CP+TS GS D S S
Sbjct: 369 SALINSQSCPITS-SGSTDSSSQS 391
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.8 bits (44), Expect = 5.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 604 QSERAALHRLRAEGDARGGLRSYLCYAAFGPL 699
++ERA +RA GDA + A GPL
Sbjct: 272 EAERAPAPAVRAAGDAAAARGAARADGAGGPL 303
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 463 CHGTT*SHSGDYQTSCAIENIPSR 534
C+G G + +C I+N P+R
Sbjct: 136 CNGEKDCSDGSDENTCDIDNDPNR 159
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +2
Query: 437 DHLERRVPLVTEQPKVIVETTKQAVLSKISPHVN 538
DH+++ P P +T Q + +SP +N
Sbjct: 289 DHIQQATPYSAPGPTYSTWSTVQTPTTVMSPTIN 322
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,598
Number of Sequences: 336
Number of extensions: 2968
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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