Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11n03
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0642 + 5414964-5415410,5415535-5416677 32 0.53
01_01_0012 + 71903-72935,73468-73981,74619-76008 31 0.70
03_06_0493 + 34315867-34316124,34316194-34316256,34317346-343176... 31 0.93
02_01_0743 - 5530184-5531078,5531160-5531405,5531815-5532450,553... 31 1.2
06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078... 28 1.5
10_08_0641 - 19518653-19518979 30 1.6
05_07_0150 - 28035518-28036390 30 1.6
03_02_0767 - 11009682-11010251 30 1.6
01_01_0702 + 5423059-5423571 30 1.6
07_01_1039 - 9037689-9038225,9038831-9040627 30 2.1
09_02_0223 + 5977138-5977459,5979842-5980842 29 2.8
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 29 2.8
06_01_0570 + 4026889-4027537,4028340-4028689,4029258-4029433,402... 29 3.7
01_01_0302 + 2473556-2473890,2475454-2475517,2475927-2476118 29 3.7
11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610 29 4.9
09_04_0580 + 18681019-18681475,18682637-18682920,18683088-186833... 29 4.9
03_06_0120 + 31804301-31804412,31804525-31804631,31804714-318047... 29 4.9
02_05_0712 + 31130650-31130786,31130927-31130980,31131076-311312... 29 4.9
11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874 28 6.5
04_04_0555 - 26210346-26211458,26211530-26211719,26211826-262119... 28 6.5
01_06_1297 - 36095727-36095776,36096285-36097467 28 6.5
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644... 28 6.5
07_03_0460 + 18425464-18427473 28 8.6
03_01_0639 - 4678993-4679034,4679880-4679945,4680040-4680150,468... 28 8.6
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 28 8.6
>12_01_0642 + 5414964-5415410,5415535-5416677
Length = 529
Score = 31.9 bits (69), Expect = 0.53
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +2
Query: 347 EAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLSKIS 526
EA +L A A SAP A GDA AA + L V ++ + +T + VL+ +S
Sbjct: 432 EAARILDARREALSRSAPAASGDAMCAALVAELRELSERVADE-REYAQTGRACVLAGMS 490
Query: 527 PHVNKVYGARAVAEQRVK 580
H + + + E RV+
Sbjct: 491 SHGQQRASSVQLGELRVR 508
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 31.5 bits (68), Expect = 0.70
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = +2
Query: 149 VFFEDVNRVSEMATEVSSAPTTLPQLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLE 328
VFF N + + T S+ P TLP + S M T+ GA+ + LL
Sbjct: 183 VFFSASNTAATVVT--STFPPTLPAVSSAYPNMVNQTMPNMPNYAGALSAAFPSLLGLLP 240
Query: 329 WALSTAEAGVVLAATTAA 382
A + A GVVL A+
Sbjct: 241 AASTGASGGVVLPGVGAS 258
>03_06_0493 +
34315867-34316124,34316194-34316256,34317346-34317604,
34317710-34317819
Length = 229
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 348 KLE*FLLQPLPRRMCQLLSLSATPRLLQP 434
K+ FLL PL R +CQLL A RLL P
Sbjct: 27 KVSAFLLTPLARTVCQLLPSHARSRLLCP 55
>02_01_0743 -
5530184-5531078,5531160-5531405,5531815-5532450,
5534499-5534607,5536157-5536321,5536446-5536543,
5536648-5536898
Length = 799
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -2
Query: 384 GAAVVAARTTPASAVDRAHSRSEWAPLTFE*IAPTCPTAASTVGIAIAFCTDWSCGNVVG 205
G +VVAA T ++ D A + A + + +CP A VG+ DWS +
Sbjct: 547 GVSVVAAWTRASAPTDLAFDKRRVAFNSESGTSMSCPHVAGVVGLLRTLRPDWSPAAIRS 606
Query: 204 AELTS 190
A +T+
Sbjct: 607 ALMTT 611
>06_02_0187 +
12805788-12807007,12807059-12807186,12807811-12807859,
12808508-12808853
Length = 580
Score = 28.3 bits (60), Expect(2) = 1.5
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = -2
Query: 471 SVTSGTLRSR*SMAAATLASPTARGADTYGAAVVAARTTP 352
S TSG S S AAAT ++ TA T AA VAA T P
Sbjct: 72 SPTSGIAVSFLSTAAATNSTDTATVPTTTAAARVAATTRP 111
Score = 20.6 bits (41), Expect(2) = 1.5
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 378 AVVAARTTPASAVDRAHSRSEWAP 307
AVV + PA + + EW P
Sbjct: 151 AVVGLASKPAHVFSNPYFKCEWLP 174
>10_08_0641 - 19518653-19518979
Length = 108
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 589 GALVGQSERAALHRLRAEGDARGGLRSYLCYAAFGPL 699
GA+ QS R AL R GD GG + CY GP+
Sbjct: 53 GAVNSQSARLALAHERHVGDVVGGDSTGCCYRRHGPI 89
>05_07_0150 - 28035518-28036390
Length = 290
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/98 (29%), Positives = 42/98 (42%)
Frame = +2
Query: 338 STAEAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLS 517
ST G +A TT A PL+ ++AAA+ HL PL++E VI T A +S
Sbjct: 39 STPAKGKSVATTTTAVLSPPPLS-SPGELAAALSHLRTADPLLSE---VISSTGAPAFIS 94
Query: 518 KISPHVNKVYGARAVAEQRVKSLKELSWAKANALLSTA 631
S + +Q S +A+ AL+ A
Sbjct: 95 SPSRPAFHSLAHSILHQQLAPSAAAAIYARFLALIPAA 132
>03_02_0767 - 11009682-11010251
Length = 189
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 171 GSRKWRQK*AQLPQHCHSSNLCRRQW 248
GSR WR+ AQ+P+ S CR +W
Sbjct: 49 GSRHWRRMAAQMPRRRRSPAQCRDRW 74
>01_01_0702 + 5423059-5423571
Length = 170
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -2
Query: 291 IAPTCPTAASTVGIAIAFCTDWSCGNVVGAELTSVAISET 172
+A C TAA G+ AFC DW CG L S A+ ET
Sbjct: 36 VAEEC-TAAYIGGVRAAFCGDWLCG------LCSEAVKET 68
>07_01_1039 - 9037689-9038225,9038831-9040627
Length = 777
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +2
Query: 359 VLAATTAAPYVSAPL--AVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLSKISPH 532
+LAA T A SAPL A+ AKV AA+ V L+T PK++ ++++L +
Sbjct: 93 LLAAFTHAHPHSAPLLRALTAAKVLAAVASSAAAVSLLTFIPKLLRIKVRESLLRDKASR 152
Query: 533 VNKVYG-ARAVAEQRVKSLKELS 598
+++ G R E ++++EL+
Sbjct: 153 LHRDLGLVRRREEATSRAVRELT 175
>09_02_0223 + 5977138-5977459,5979842-5980842
Length = 440
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 533 VNKVYGARAVAEQRVKSLKELSWAKANALLSTAYGQKAMHGVDYGATYAMQLLDHYLPPV 712
+ K+ G A++ + SL +L AN ++ YG + HGVD G A++L Y P
Sbjct: 200 LTKISGEMALSTVNMGSLSDL----ANMANASLYGFEDYHGVDIGVVRAVRL--WYTPVA 253
Query: 713 G 715
G
Sbjct: 254 G 254
>06_03_0473 +
21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 305 KGAHSLLEWALSTAEAGVVLAATTAAPYVSAPLAVGDAKVA-AAIDHLERRVPLVTEQPK 481
K ++L WA T + V+ AAT AA SAPL G A AA+ + V ++ E
Sbjct: 307 KAYGAVLYWAAPTVVSAVMFAATAAAG--SAPLDAGTVFTALAALRAMSEPVRMLPEAMT 364
Query: 482 VIVE 493
++++
Sbjct: 365 MMIQ 368
>06_01_0570 +
4026889-4027537,4028340-4028689,4029258-4029433,
4029593-4029659,4029746-4029780,4030084-4030186,
4031606-4031699,4031764-4031813,4031889-4032000,
4032275-4032401,4032491-4032941
Length = 737
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 461 LVTEQPKVIVETTKQAVLSKISPHVNK-VYGARAVAEQRVKSLKELSWA 604
L +++ + + + AV + S V + ++G RA AE+RV+ L + WA
Sbjct: 131 LASDEADAVADQFEAAVGNSFSQTVLRGLWGDRAAAEERVRELLAVEWA 179
>01_01_0302 + 2473556-2473890,2475454-2475517,2475927-2476118
Length = 196
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 251 IPTVEAAVGQVGAIYSKVKGAHSLLEWALSTAEAGVVLAATTAAP 385
+ ++ A G VGA SK+ A +L + L+TA + LAAT P
Sbjct: 4 VARLDQADGAVGAA-SKIAAARALGAFGLATASLAINLAATRGPP 47
>11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610
Length = 913
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 169 PGLGNGDRSKLSSHNIATAPICAEGNGYPYR 261
P G G R +++ N A C+ GNGY Y+
Sbjct: 301 PDNGTGSRIIVTTDNQQVANTCSHGNGYVYQ 331
>09_04_0580 +
18681019-18681475,18682637-18682920,18683088-18683315,
18683415-18683864
Length = 472
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 533 VNKVYGARAVAEQRVKSLKELSWAKANALLSTAYGQKAMHGVDYGATYAMQL 688
+ K+ G A A SL +LS N +T YG + HGVD G A +L
Sbjct: 245 LTKISGETASATVNSGSLSDLS----NVTNATLYGFEDYHGVDIGVVKAARL 292
>03_06_0120 +
31804301-31804412,31804525-31804631,31804714-31804756,
31806069-31806187
Length = 126
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = -2
Query: 432 AAATLASPTARGADTYGAAVVAARTTPASAVDRAHSRSEWAPLTFE*IAPTCPTAAS 262
A + L S AR T AA A R +SA D AH ++W +T+ I TC A+
Sbjct: 6 ARSGLRSLAARAKAT--AAPAARRRMSSSAHDDAHETAKWEKITYAGIV-TCTLLAA 59
>02_05_0712 +
31130650-31130786,31130927-31130980,31131076-31131249,
31131425-31131530,31131646-31131687,31131768-31131824,
31132410-31132850
Length = 336
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -1
Query: 685 LHSI-GSSVVHPVHRLLPVGGGEQRVRFGPRELLQRLDPLLGDRAGSVHLVHV 530
L SI G + HP P GG Q + P + DP G A + + H+
Sbjct: 208 LESIPGVLLPHPSSAAFPGAGGLQDAAWAPSPTMDLYDPYYGAHAAAAQMHHI 260
>11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874
Length = 330
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +2
Query: 161 DVNRVSEMATEVSSAPTTLP---QLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLEW 331
++ + MAT S+ TT+P Q Q+ K T AA G+ Y + L E
Sbjct: 175 NLESMQSMATAPSNEATTIPKLFQFQTWMKPSPATTSSAATAAAGSCYKQAMAMQELQEE 234
Query: 332 ALSTAEAGVVLAA 370
+A A + ++
Sbjct: 235 QEGSAAAAAMASS 247
>04_04_0555 -
26210346-26211458,26211530-26211719,26211826-26211960,
26212072-26212169,26212262-26212425,26213558-26214032
Length = 724
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 481 SHSGDYQTSCAIENIPSREQGVRS-PRGRRATGQVFEGALVGQSERAA 621
+H G T+ +E + + E R P G RATG +GA E AA
Sbjct: 10 AHGGATPTAADVEMVEASELRRRGKPSGDRATGPSRDGAAAAAEEAAA 57
>01_06_1297 - 36095727-36095776,36096285-36097467
Length = 410
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +2
Query: 203 APTTLPQLQSVQKAMA--IPTVEAAVGQVGAIYSKVKGAHSLL--EWALSTAEAGVVLAA 370
+P+ L +L + K + T A +GA+ V G +++ A + VL A
Sbjct: 107 SPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSATVLGA 166
Query: 371 TTAAPYVSAPLAVGDAKVAAAID 439
TA PY + LAVG V + +D
Sbjct: 167 VTAVPYNLSVLAVGGLIVPSGLD 189
>01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,
6448164-6448243,6449045-6449129,6449221-6449312,
6449388-6449456,6449544-6449580,6449662-6449744,
6450427-6450873,6450978-6451014,6451101-6451158,
6451243-6451382,6451610-6451675,6451794-6451908,
6453261-6453299,6453482-6453543
Length = 1927
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 451 QSATCHGTT*SHSGDYQTSCAIENIPSREQGVRSPRGRRATGQVFEGALVGQSE 612
+S+ HG S S + Q I+NI S+ Q + S TGQV +V S+
Sbjct: 1146 ESSEYHGVPVSCSNNIQVLNGIQNIGSKHQPLHSSISYHQTGQVHLPDIVHASD 1199
>07_03_0460 + 18425464-18427473
Length = 669
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = -2
Query: 381 AAVVAARTTPASAVDRAHSRSE-WAPLTFE*IAPTCPTAASTVGIAIAFCTDWSCGNVVG 205
A + +R TP A+ + + +E W + IA V I +C D S G V+
Sbjct: 413 AYIGKSRGTPLMAIKMSTAVTEKWKDMLGNEIAVQSRIKHMNVAKLIGYCLDHSDGTVLI 472
Query: 204 AELTSVAISETRFTSSKKTIKILTFEFNKKL 112
E ++++ + F + K + T + K+
Sbjct: 473 YEYGAISLYDVLFGDAGKIYRPFTCDLRLKI 503
>03_01_0639 -
4678993-4679034,4679880-4679945,4680040-4680150,
4680266-4680304,4680394-4680493,4680597-4680712,
4680897-4681035,4681151-4681222,4681331-4681434,
4681616-4681867
Length = 346
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 658 GLRSYLCYAAFGPLSTAGW 714
GL LC+AAFGPL+T +
Sbjct: 199 GLGEPLCFAAFGPLATTAF 217
>02_05_0693 -
30977323-30977421,30977783-30977843,30978874-30978996,
30979258-30979340,30979847-30979924,30980375-30980506,
30980685-30980728,30980966-30981090,30981468-30981769,
30981877-30981994,30982444-30982574,30983082-30983276,
30983362-30983646
Length = 591
Score = 27.9 bits (59), Expect = 8.6
Identities = 30/88 (34%), Positives = 41/88 (46%)
Frame = +2
Query: 176 SEMATEVSSAPTTLPQLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLEWALSTAEAG 355
+E A +S+P P LQ+ + A A P+ A+G + V GA E + T AG
Sbjct: 20 AEAAASTTSSP---PPLQN-RPAAASPS--HALGSRLGFLNGVPGAPGAREASAFTT-AG 72
Query: 356 VVLAATTAAPYVSAPLAVGDAKVAAAID 439
LAA AA S P+A DA +D
Sbjct: 73 F-LAAGAAAALASLPVAYADANEVGVVD 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,462,343
Number of Sequences: 37544
Number of extensions: 379734
Number of successful extensions: 1440
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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