Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m24
(678 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56660.1 68414.m06516 expressed protein 35 0.043
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 34 0.075
At4g33740.2 68417.m04791 expressed protein 32 0.30
At4g33740.1 68417.m04790 expressed protein 32 0.30
At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine deacet... 32 0.40
At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine deacet... 32 0.40
At4g08990.1 68417.m01485 DNA (cytosine-5-)-methyltransferase, pu... 31 0.53
At2g22795.1 68415.m02704 expressed protein 31 0.70
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 29 2.1
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 29 2.1
At1g55050.1 68414.m06288 expressed protein ; expression supporte... 29 2.1
At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2) 29 2.8
At3g45830.1 68416.m04960 expressed protein 29 2.8
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 29 2.8
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 29 2.8
At2g35490.1 68415.m04347 plastid-lipid associated protein PAP, p... 29 3.7
At4g25360.1 68417.m03649 expressed protein 28 4.9
At3g48710.1 68416.m05319 expressed protein putative protein - Ar... 28 4.9
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 28 4.9
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 28 6.5
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 28 6.5
At4g26630.1 68417.m03837 expressed protein 28 6.5
At2g16900.1 68415.m01946 expressed protein 28 6.5
At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi... 27 8.6
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 27 8.6
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 27 8.6
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 27 8.6
At4g03550.1 68417.m00486 glycosyl transferase family 48 protein ... 27 8.6
At4g03180.1 68417.m00435 expressed protein 27 8.6
At2g37780.1 68415.m04639 DC1 domain-containing protein contains ... 27 8.6
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 27 8.6
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 35.1 bits (77), Expect = 0.043
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
++ KEK+ +SG E K A EK+ ++S EKE +G+ +K E ES T
Sbjct: 135 KKNKKEKD-ESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGT 187
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
E A+EK+ + EKD +TEKE ++ +K G E E K T
Sbjct: 257 ESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEGKKTKEHDAT 310
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = +3
Query: 267 NGDAHIHEQTAK----EKELDSGTPENEKDATTEKEAIEISNEK---EAGPVTNGESEQK 425
+GD + E K EKE G + ++ EKE + N+K E+GP + K
Sbjct: 96 HGDLEVKESDVKVEEHEKEHKKGKEKKHEELEEEKEGKKKKNKKEKDESGPEEKNKKADK 155
Query: 426 AENGESVTTTPDD 464
+ E V+ ++
Sbjct: 156 EKKHEDVSQEKEE 168
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 222 RVEQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPV 401
R+E+ DV K ++ + + + D + + E++A+E +NEKEA
Sbjct: 72 RIEETKDV---KDEVEDEEGSKNEGGGDVSTDKENGDEIVEREEEEKAVEENNEKEAEGT 128
Query: 402 TNGESEQKAENGES 443
N E + + NGES
Sbjct: 129 GNEEGNEDSNNGES 142
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 407
+++ D + K + GD ++ E ++ E + EKEA NE+ N
Sbjct: 81 DEVEDEEGSKNEGGGDVSTDKENGDEI-VEREEEEKAVEENNEKEAEGTGNEEGNEDSNN 139
Query: 408 GESEQKAENGE 440
GESE+ + E
Sbjct: 140 GESEKVVDESE 150
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 32.3 bits (70), Expect = 0.30
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 228 EQLADVDALKPQINGD--AHIHEQTAKEKELDSGTPENEKDA-TTEKEAIEISNEKEAGP 398
E++A+ D G+ A E+ K +E + + K+A T+K+ + EKE+G
Sbjct: 125 EEVAEDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDDETLEEEKESGM 184
Query: 399 VTNGESEQKAENGESVTTTPDD 464
N E E++ + + + T D+
Sbjct: 185 SENDEKEKETNHADEIDMTVDE 206
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 330 ENEKDATTEKEAIEISN---EKEA-GPVTNGESEQKAENGESVTTTPDD 464
ENEK +++ EIS+ EKE V NG E++ E E DD
Sbjct: 83 ENEKHVEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEEEVAEDD 131
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 32.3 bits (70), Expect = 0.30
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 228 EQLADVDALKPQINGD--AHIHEQTAKEKELDSGTPENEKDA-TTEKEAIEISNEKEAGP 398
E++A+ D G+ A E+ K +E + + K+A T+K+ + EKE+G
Sbjct: 125 EEVAEDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDDETLEEEKESGM 184
Query: 399 VTNGESEQKAENGESVTTTPDD 464
N E E++ + + + T D+
Sbjct: 185 SENDEKEKETNHADEIDMTVDE 206
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 330 ENEKDATTEKEAIEISN---EKEA-GPVTNGESEQKAENGESVTTTPDD 464
ENEK +++ EIS+ EKE V NG E++ E E DD
Sbjct: 83 ENEKHVEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEEEVAEDD 131
>At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 955
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 276 AHIHEQTAKEKELDSGTPENE--KDATTEKEAIEISNEKEAGPVTNGESEQKAENG 437
AHI +E+E+ S T ENE + +T E E + S E G + +S+ +E+G
Sbjct: 542 AHIVAYKNEEEEVRSSTEENENVRSSTEENEYVRSSTEAGRGEDPHEDSDNISESG 597
>At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 949
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 276 AHIHEQTAKEKELDSGTPENE--KDATTEKEAIEISNEKEAGPVTNGESEQKAENG 437
AHI +E+E+ S T ENE + +T E E + S E G + +S+ +E+G
Sbjct: 536 AHIVAYKNEEEEVRSSTEENENVRSSTEENEYVRSSTEAGRGEDPHEDSDNISESG 591
>At4g08990.1 68417.m01485 DNA (cytosine-5-)-methyltransferase,
putative strong similarity to cytosine-5
methyltransferase (METII) [Arabidopsis thaliana]
GI:6523846; contains Pfam profiles PF01426: BAH domain,
PF00145: C-5 cytosine-specific DNA methylase
Length = 1512
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 258 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVT-NGESEQKAEN 434
P++ +A IHE +E E D ENE+D E+EA+E+ N E + N
Sbjct: 628 PEVPSEA-IHEVEEEEIEEDEEEDENEED-DIEEEAVEVQKSHTPKKSRGNSEDMEIKWN 685
Query: 435 GESVTTTPD 461
GE + T D
Sbjct: 686 GEILGETSD 694
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +3
Query: 300 KEKELDSGTPEN-EKDA----TTEKEAIEISNEKEAGPVTNGESEQKAENG 437
KE E+ G EN EK++ + E EI +K++G V E E+K +NG
Sbjct: 99 KENEIVEGGEENKEKESEGIVSNEDSNSEIEEKKDSGGVEESEVEEKRDNG 149
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENEKDATTEK---EAIEISNEKEAGPVTNGESEQKAENGESVTTTP 458
E AKEK ++S + E +D TEK +E + EKE ES + + E T T
Sbjct: 470 ETEAKEK-VESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETK 528
Query: 459 DD 464
D+
Sbjct: 529 DN 530
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +3
Query: 246 DALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQK 425
+ALK + + E+T K +E+ E++ +A T+ E+ ++K N + E++
Sbjct: 193 EALKEKNEAELAEEEETNKGEEVKEANKEDDVEADTKVAEPEVEDKKTESKDENEDKEEE 252
Query: 426 AEN 434
E+
Sbjct: 253 KED 255
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPE-NEKDATTEKEAIEISNEKEAGP-- 398
+ L+D + KP + GD + ++ + DS TPE K E I + + P
Sbjct: 68 DDLSDSEKEKPNLVGDGKVSDEVDGSLKEDSTTPEATPKPEVVSGETIGVDDVSSLSPKP 127
Query: 399 --VTNGES--EQKAENGESVTTTPDDG 467
V++G E+ + E V DDG
Sbjct: 128 EAVSDGVGVVEENKKVKEDVEDIKDDG 154
>At1g55050.1 68414.m06288 expressed protein ; expression supported by
MPSS
Length = 914
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTE----KEAIEISNEKEAG 395
+Q A+ D + Q + + + E D TP+++K T++ + + I + A
Sbjct: 776 KQQANTDIPRRQSTRKRPLTTRALEALESDFFTPKSKKTTTSKPRNRERSARIKHSANAN 835
Query: 396 PVTNGESEQKAENGESVTTTPDD 464
T GES+ E++T+ P D
Sbjct: 836 NKTPGESDNSFHVKEAITSKPSD 858
>At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2)
Length = 638
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 237 ADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGES 416
A V KP + +++Q +KE+E + ENE+D T+ SN+ ++ N ES
Sbjct: 551 ARVRLWKPMVE---EMYQQESKEREREEELEENEEDQETKN-----SNDDKSTKSNNNES 602
Query: 417 EQKAENGES---VTTTPD 461
A S TT PD
Sbjct: 603 NFTAVRTTSQTPTTTAPD 620
>At3g45830.1 68416.m04960 expressed protein
Length = 1298
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 279 HIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVT--NGESEQKAENGESVTT 452
++H +E D GT +K +KEA E + E+EA V E + + E G T
Sbjct: 1167 YLHRDREQEDFEDDGTSSTKKWKRPKKEAAEQTEEQEAVTVAFLGNEEQTETEMGSEPKT 1226
Query: 453 TPDDG 467
G
Sbjct: 1227 GEPTG 1231
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 300 KEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGE--SEQKAENGE 440
K +E+D G+ + E E + +NE++ P +GE S +K E+ E
Sbjct: 67 KSEEVDRGSKSFPDEKNEETEVVTETNEEKTDPEKSGEENSGEKTESAE 115
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 330 ENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGE 440
E EK KEA + ++KE+ V E E+KA +GE
Sbjct: 194 EGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGE 230
>At2g35490.1 68415.m04347 plastid-lipid associated protein PAP,
putative similar to plastid-lipid associated protein
PAP3 [Brassica rapa] GI:14248552; contains Pfam profile
PF04755: PAP_fibrillin
Length = 376
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 327 PENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
PE E+ T E+ NE E G GE+E A NG +V+
Sbjct: 107 PELEESGTRFMESDPPRNEDEWGGEIGGETEADAGNGSAVS 147
>At4g25360.1 68417.m03649 expressed protein
Length = 533
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +3
Query: 225 VEQLADVDALKPQINGDAHIHEQTAKEKELD----SGTPENEKDATTEKEAIEISNEKEA 392
+++ +D++A + D+ K + S + E T EKE + S+ E
Sbjct: 78 LQKSSDINAFDKNLTSDSSSGLPVVVSKSIPPPDFSSDRKLETPLTQEKEDLVSSDITEK 137
Query: 393 GPVTNGESE---QKAENGESVTTTPDD 464
V +GE E KAE+ S ++ PDD
Sbjct: 138 TDVQSGERETNVSKAEDTPSASSPPDD 164
>At3g48710.1 68416.m05319 expressed protein putative protein -
Arabidopsis thaliana, EMBL:AL078465.1
Length = 462
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3
Query: 258 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVT---NGESEQKA 428
PQ+ + E+ + K+ D E EKD E++ EI EK PVT ++
Sbjct: 11 PQLADTVAVTEKDTETKKKD----EVEKDEAMEEKGEEIDGEKVKSPVTPVSERPIRERK 66
Query: 429 ENGESVTTTP 458
G V TP
Sbjct: 67 RTGRYVIDTP 76
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
E+ KEKE D E KD E+ E EKE G + E E V+
Sbjct: 804 EKVRKEKERDE--KEKRKDKDKERREKEREREKEKGKERSKREESDGETAMDVS 855
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +3
Query: 252 LKPQINGDAHIHEQTAKEKELD-----SGTPENE-KDATTEKEAIEISNEKEAGPVTNGE 413
L+ + A+IH +TAK+ L+ S +P K + + EA+ + N + + NG
Sbjct: 226 LRVALTSIAYIHPETAKKHSLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGT 285
Query: 414 SEQKAENGESV 446
S K E +++
Sbjct: 286 SSAKKEPRQAI 296
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 327 PENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 464
P+N+KD T K A N+ + + + E+K++ E V+ DD
Sbjct: 594 PDNKKDPTKSKSADAEGNDDNSH--KDDQPEEKSKKAEEVSLNSDD 637
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/83 (22%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEK--EAIEISNEKEAGPV 401
E +A+ D + +I+ ++ A+ ++ +S +NE +A T+K E +E++ ++
Sbjct: 44 EDMAEPDNM--EIDAQIKKDDEKAETEDKESEVKKNEDNAETQKMEEKVEVTKDEGQAEA 101
Query: 402 TNGESE-----QKAENGESVTTT 455
TN + + ++ ++G SV T
Sbjct: 102 TNMDEDADGKKEQTDDGVSVEDT 124
>At2g16900.1 68415.m01946 expressed protein
Length = 382
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = +3
Query: 240 DVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESE 419
DV ++ + A E T EKE G ++K +EA EKE E
Sbjct: 288 DVGWMRSVLEEFAQYQENTDSEKERQEGLVRSKKQEMEIQEADLARIEKEVAEARLRVEE 347
Query: 420 QKAENGESVT 449
KAE E T
Sbjct: 348 MKAELAELET 357
>At5g63530.1 68418.m07974 copper chaperone (CCH)-related low
similarity to copper homeostasis factor [GI:3168840];
nearly identical to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 355
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +3
Query: 270 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
G+ + A+EK+++ PE +K+ +K E E GES + ++ +S
Sbjct: 2 GEEEKKPEAAEEKKMEEKKPEEKKEGEDKKVDAEKKGEDSDKKPQEGESNKDSKE-DSAP 60
Query: 450 TTPD 461
P+
Sbjct: 61 AAPE 64
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 327 PENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 464
P+N+KD T K + + + + E+K++ E V+ DD
Sbjct: 594 PDNKKDPTKSKSCSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDD 639
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 327 PENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 464
P+N+KD T K + + + + E+K++ E V+ DD
Sbjct: 594 PDNKKDPTKSKSCSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDD 639
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 327 PENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 464
P+N+KD T K + + + + E+K++ E V+ DD
Sbjct: 594 PDNKKDPTKSKSCSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDD 639
>At4g03550.1 68417.m00486 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1780
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 276 AHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTT 455
A++ E A E D + + D EKE +EI K GPV GE + + +N + T
Sbjct: 1107 AYVDEVPAGRGETDYYSVLVKYDHQLEKE-VEIFRVKLPGPVKLGEGKPENQNHAMIFTR 1165
Query: 456 PD 461
D
Sbjct: 1166 GD 1167
>At4g03180.1 68417.m00435 expressed protein
Length = 185
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 452 YSR*RQETKERKSEKEVVAQVYQLQQER*AQTRKEAKGR 568
Y + R+E + + E+E + Q + +E RKEAKG+
Sbjct: 114 YKQTREEMERVRKEREAMFQAKKEAKEEAESRRKEAKGK 152
>At2g37780.1 68415.m04639 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain
Length = 286
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 270 GDAHIHEQTAKEKELDSGTPENEKDATT 353
GD H H+Q ++SG+P++E A +
Sbjct: 216 GDGHQHQQQNHHPYMNSGSPKSESSAVS 243
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 303 EKELDSGTPENEKDATTEKEA--IEISNEKEAGPVTNGESEQKAEN 434
EKE + +E D TT+KE +E S E+ NG E+ EN
Sbjct: 133 EKEKNVKEVGSESDETTQKEKTQLEESTEENKSEDGNGNEEKAEEN 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,886,996
Number of Sequences: 28952
Number of extensions: 187639
Number of successful extensions: 864
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -