Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m23
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.41 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.41 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   1.7  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.9  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 220 TDFYDTTPNTDIPPYPNVDP 279
           +DFY  +P   IPP+P + P
Sbjct: 219 SDFYRFSPTGLIPPHPGLSP 238


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 220 TDFYDTTPNTDIPPYPNVDP 279
           +DFY  +P   IPP+P + P
Sbjct: 111 SDFYRFSPTGLIPPHPGLSP 130


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 420 N*KEHFGCKYQRARNCASAR 479
           N +E F C+Y + +NC   +
Sbjct: 246 NYQEGFSCQYYQGKNCVGGK 265


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 114 WYRFRFAFGKFFQITIYIISIFHV 43
           W  F+  +GK   +T Y IS+F V
Sbjct: 191 WATFQEPWGKRAYVTWYSISVFMV 214


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 420 N*KEHFGCKYQRARNC 467
           N +E F C+Y + +NC
Sbjct: 226 NYQEGFSCQYYQGKNC 241


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 238 TPNTDIPPYPN 270
           +P + +PPYPN
Sbjct: 480 SPMSSLPPYPN 490


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/21 (23%), Positives = 15/21 (71%)
 Frame = +3

Query: 162 CVPMASSKKFIQRKIVKRHHR 224
           C+ + + + ++++K+ +R HR
Sbjct: 230 CIYVFNPRYYLEKKVTRRLHR 250


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 572 GKRLQSKEIQNHNPAHQ 622
           G  +Q +  Q+H P HQ
Sbjct: 168 GHHMQEQHPQHHQPHHQ 184


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/21 (23%), Positives = 15/21 (71%)
 Frame = +3

Query: 162 CVPMASSKKFIQRKIVKRHHR 224
           C+ + + + ++++K+ +R HR
Sbjct: 230 CIYVFNPRYYLEKKVTRRLHR 250


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 572 GKRLQSKEIQNHNPAHQ 622
           G  +Q +  Q+H P HQ
Sbjct: 170 GHHMQEQHPQHHQPHHQ 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.313    0.132    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,703
Number of Sequences: 336
Number of extensions: 3681
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)