Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m23
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34536| Best HMM Match : DUF680 (HMM E-Value=2.1) 104 7e-23
SB_33278| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_24652| Best HMM Match : Kinesin (HMM E-Value=3) 29 3.3
SB_54045| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 3.3
SB_14335| Best HMM Match : DUF1315 (HMM E-Value=2.7) 29 4.4
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 29 4.4
SB_57513| Best HMM Match : rve (HMM E-Value=0.0064) 28 5.8
SB_32822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_8971| Best HMM Match : efhand (HMM E-Value=2.3e-11) 28 7.6
>SB_34536| Best HMM Match : DUF680 (HMM E-Value=2.1)
Length = 331
Score = 104 bits (249), Expect = 7e-23
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 4/167 (2%)
Frame = +1
Query: 103 KSIPQELNEYLAYVARTGDPVYQWPLVKSLFKEKLLNVITDFYDTTPNTDIPPYPNVDPF 282
K + QEL + L +A+TG +Y W +K +F K+ V+ DF++++P+ +
Sbjct: 6 KVLTQELEQLLTNIAQTGRILYPWNNLKPVFMYKMDRVMRDFFESSPSRNSTSSEPTHVA 65
Query: 283 NYDTMKNSLIERLESFTSAPFTVQRICELLTYPRKQYNRVDKFMRAIEKNILVVSTREPG 462
+++ M+ L++ L+SFTS PFT+QR+CEL+ P++ Y +KFMR IEKN+LVVS+
Sbjct: 66 DFEVMRQRLLDCLDSFTSPPFTIQRLCELMVEPKRHYKNSEKFMRGIEKNVLVVSSLADE 125
Query: 463 IVRQPEPENGDNA--EHLVNGSDNNSEYNV--DVEMEDVSWKEATEQ 591
+P N D A + NG N + EME V+ ++ ++
Sbjct: 126 -NEEPLVNNIDTAHTSSIPNGPVTNGIMSTAQPTEMESVNDSDSNDR 171
>SB_33278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 925
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 322 ESFTSAPFTVQRICELLTYPRKQYNRVDKFMRAIEK 429
E T++PFT +R EL +P+K+ R FM + K
Sbjct: 225 EFSTNSPFTCERETELKNHPKKRMARESHFMPLLMK 260
>SB_24652| Best HMM Match : Kinesin (HMM E-Value=3)
Length = 351
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +1
Query: 484 ENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDD 645
+ G+ ++ NG D+N D +EDV K+ ++++E QP +S+ ++ D+
Sbjct: 255 KKGNAGKNGWNG-DSNDGIEEDGSLEDVEIKDIGNEKSTERQPMNSEPLLNGDE 307
>SB_54045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +1
Query: 484 ENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDD 645
+ G+ ++ NG D+N D +EDV K+ ++++E QP +S+ ++ D+
Sbjct: 55 KKGNAGKNGWNG-DSNDGIEEDGSLEDVEIKDIGNEKSTERQPMNSEPLLNGDE 107
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +1
Query: 484 ENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDD 645
+ G+ ++ NG D+N D +EDV K+ ++++E QP +S+ ++ D+
Sbjct: 55 KKGNAGKNGWNG-DSNDGIEEDGSLEDVEIKDIGNEKSTERQPMNSEPLLNGDE 107
>SB_14335| Best HMM Match : DUF1315 (HMM E-Value=2.7)
Length = 1223
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 PYPNVDPFNYDTMKNSLIERLESFTSAPFT-VQRICELLT--YPRKQYNRVDKFMRA 420
P ++ PF++ T LIE+L F++ F V ++ L+ +PR +NR+ +R+
Sbjct: 507 PIASLKPFSFATNAPVLIEQLSWFSATSFVEVAKLYYRLSPLFPRSDWNRIRFSLRS 563
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 366 FTNPLYRKRGRCKRFQTFYQTILHCIVIKRVHVRIWRNI 250
F P Y KRGR + + Y I C+ + VH+ I R++
Sbjct: 211 FFGPFYVKRGRGRVSEKRYGCIFVCMNSRAVHLEIARSL 249
>SB_57513| Best HMM Match : rve (HMM E-Value=0.0064)
Length = 515
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -1
Query: 435 NVLFNCPHKLVNAVVLLTRICK*FTNPLYRKRGRCKRFQTFYQTILHCIVIKRVHVRIWR 256
N NC +L+ T F P Y KRGR + Y I C+ + VH+ I R
Sbjct: 223 NRWLNCQSRLLPYEPPFTFTGVDFFGPFYVKRGRGRVSTKRYGCIFVCMNSRAVHLEIAR 282
Query: 255 NI 250
++
Sbjct: 283 SL 284
>SB_32822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +1
Query: 241 PNTDIPPYPNVDPFNYDTMKNSLIERLESFTSAPFTVQRICELLTYPRKQYNRVDKFMRA 420
P P P+V F+ ++N + E T + +T +R + +Q R+D
Sbjct: 1083 PTRTAPANPDVIIFDGAVLENMIKPSPEDKTFSDYTARRFVPYIEAQLQQAKRIDLVWDE 1142
Query: 421 IEKNILVVSTRE 456
++ L V+TRE
Sbjct: 1143 YVESSLKVTTRE 1154
>SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 768
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 448 TREPGIVRQPEPENGDNAEHLVNGSDNN-SEYNVDVEMEDVSWKEATEQRNSEPQP 612
T +PG P+PE G +A L G D+ + +V E+ D++ ++ ++ +EP+P
Sbjct: 286 TPDPGGREAPDPE-GRSAWELSGGDDDGWTLEDVQFELIDMNEEKPVDEPVAEPKP 340
>SB_8971| Best HMM Match : efhand (HMM E-Value=2.3e-11)
Length = 234
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 481 PENG---DNAEHLVNGSDNNSEYNVDVEMEDVSW 573
PE G D A+HL++GSD N++ ++ ++ + W
Sbjct: 178 PEKGESLDEAKHLIDGSDENADGDLQLDEILLHW 211
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.132 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,540,482
Number of Sequences: 59808
Number of extensions: 429822
Number of successful extensions: 1869
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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