Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m21
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070532-1|AAL48003.1|  531|Drosophila melanogaster GM14334p pro...    92   4e-19
AF113612-1|AAD21582.1|  531|Drosophila melanogaster aspartyl tRN...    92   4e-19
AE013599-1606|AAF58445.1|  531|Drosophila melanogaster CG3821-PA...    92   4e-19

>AY070532-1|AAL48003.1|  531|Drosophila melanogaster GM14334p
           protein.
          Length = 531

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 48/93 (51%), Positives = 62/93 (66%)
 Frame = +2

Query: 311 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 490
           +S  D + G YG  +MIQS  +  +R +  V  LS ++    VWVR R+ TSRAKGKQCF
Sbjct: 47  DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106

Query: 491 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNI 589
            +LRQ SSTVQ +++V +   ISKQMVKF GNI
Sbjct: 107 LILRQQSSTVQCILAVGD--VISKQMVKFAGNI 137


>AF113612-1|AAD21582.1|  531|Drosophila melanogaster aspartyl tRNA
           synthetase protein.
          Length = 531

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 48/93 (51%), Positives = 62/93 (66%)
 Frame = +2

Query: 311 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 490
           +S  D + G YG  +MIQS  +  +R +  V  LS ++    VWVR R+ TSRAKGKQCF
Sbjct: 47  DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106

Query: 491 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNI 589
            +LRQ SSTVQ +++V +   ISKQMVKF GNI
Sbjct: 107 LILRQQSSTVQCILAVGD--VISKQMVKFAGNI 137


>AE013599-1606|AAF58445.1|  531|Drosophila melanogaster CG3821-PA
           protein.
          Length = 531

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 48/93 (51%), Positives = 62/93 (66%)
 Frame = +2

Query: 311 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 490
           +S  D + G YG  +MIQS  +  +R +  V  LS ++    VWVR R+ TSRAKGKQCF
Sbjct: 47  DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106

Query: 491 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNI 589
            +LRQ SSTVQ +++V +   ISKQMVKF GNI
Sbjct: 107 LILRQQSSTVQCILAVGD--VISKQMVKFAGNI 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,890,999
Number of Sequences: 53049
Number of extensions: 319507
Number of successful extensions: 525
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)