Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m16
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   4.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   4.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.7  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   8.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.3  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 140 SVSFSSIKCYRLDWILYR 193
           S S  ++ CY   W +YR
Sbjct: 18  SASAGNVVCYFASWTIYR 35


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 140 SVSFSSIKCYRLDWILYR 193
           S S  ++ CY   W +YR
Sbjct: 18  SASAGNVVCYFASWTIYR 35


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 303 YTESGGSKDTTRVSQIMKYGFPGLDNIRS 389
           +T+   + D    S  + YG P  D++RS
Sbjct: 63  HTDGASTPDVRPPSSSLSYGGPVNDDVRS 91


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 303 YTESGGSKDTTRVSQIMKYGFPGLDNIRS 389
           +T+   + D    S  + YG P  D++RS
Sbjct: 219 HTDGASTPDVRPPSSSLSYGGPVNDDVRS 247


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 359 IFHYLRYPSCV 327
           + H L+YP CV
Sbjct: 46  VIHVLQYPGCV 56


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 387 SYDDYVLSYDRRTRVPHWVFEHLT 458
           SYD Y +++    + PH+ F ++T
Sbjct: 431 SYDFYKMNHPVYHKDPHYGFHNVT 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,448
Number of Sequences: 336
Number of extensions: 3744
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)