Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m16
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   4.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   6.0  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   7.9  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 6/39 (15%)
 Frame = +3

Query: 504 DFMPDESIHPFFRSL------NSDYKGSGFDRGHMAAAG 602
           +F P  S+ PF +        N +Y  +GF+  HM   G
Sbjct: 159 EFAPGHSLLPFHQMNEPNMPHNVNYSNTGFNNSHMGGGG 197


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 174 LTGYYIGQCNGKNTTQDCIEVDGKLLTSLP 263
           L+ Y +  C GK T   CI+       ++P
Sbjct: 28  LSNYQLTTCPGKTTCSQCIQTTNCRWCTMP 57


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 443 NPVWYSCATVVRQHII 396
           NP WY C  +  QH +
Sbjct: 33  NPPWYLCIMMALQHYL 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,837
Number of Sequences: 2352
Number of extensions: 14954
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)