Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m16
(619 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79444-1|CAA55963.1| 297|Homo sapiens endonuclease protein. 106 5e-23
BC016351-1|AAH16351.1| 297|Homo sapiens endonuclease G protein. 106 5e-23
BC004922-1|AAH04922.1| 297|Homo sapiens endonuclease G protein. 106 5e-23
AL441992-12|CAI15412.1| 297|Homo sapiens endonuclease G protein. 106 5e-23
AB020523-1|BAA76752.1| 368|Homo sapiens endonuclease G-like pro... 89 2e-17
AL356693-1|CAH72672.1| 157|Homo sapiens nephronophthisis 4 prot... 31 4.3
AK127333-1|BAC86935.1| 157|Homo sapiens protein ( Homo sapiens ... 31 4.3
>X79444-1|CAA55963.1| 297|Homo sapiens endonuclease protein.
Length = 297
Score = 106 bits (255), Expect = 5e-23
Identities = 56/122 (45%), Positives = 74/122 (60%)
Frame = +3
Query: 246 LLTSLPALPVFGTVSAAVPYTESGGSKDTTRVSQIMKYGFPGLDNIRSYDDYVLSYDRRT 425
LL LP LPV +A +P GG + ++ KYG PGL ++S + YVL YD RT
Sbjct: 36 LLGRLPVLPV--AAAAELPPVP-GGPRGP---GELAKYGLPGLAQLKSRESYVLCYDPRT 89
Query: 426 RVPHWVFEHLTKAHIAKNDQVDRSKCDFMPDESIHPFFRSLNSDYKGSGFDRGHMAAAGN 605
R WV E L + + DR +CDF D+S+H + R+ N+DY+GSGFDRGH+AAA N
Sbjct: 90 RGALWVVEQLRPERLRGDG--DRRECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAAN 147
Query: 606 HR 611
HR
Sbjct: 148 HR 149
>BC016351-1|AAH16351.1| 297|Homo sapiens endonuclease G protein.
Length = 297
Score = 106 bits (255), Expect = 5e-23
Identities = 56/122 (45%), Positives = 74/122 (60%)
Frame = +3
Query: 246 LLTSLPALPVFGTVSAAVPYTESGGSKDTTRVSQIMKYGFPGLDNIRSYDDYVLSYDRRT 425
LL LP LPV +A +P GG + ++ KYG PGL ++S + YVL YD RT
Sbjct: 36 LLGRLPVLPV--AAAAELPPVP-GGPRGP---GELAKYGLPGLAQLKSRESYVLCYDPRT 89
Query: 426 RVPHWVFEHLTKAHIAKNDQVDRSKCDFMPDESIHPFFRSLNSDYKGSGFDRGHMAAAGN 605
R WV E L + + DR +CDF D+S+H + R+ N+DY+GSGFDRGH+AAA N
Sbjct: 90 RGALWVVEQLRPERLRGDG--DRRECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAAN 147
Query: 606 HR 611
HR
Sbjct: 148 HR 149
>BC004922-1|AAH04922.1| 297|Homo sapiens endonuclease G protein.
Length = 297
Score = 106 bits (255), Expect = 5e-23
Identities = 56/122 (45%), Positives = 74/122 (60%)
Frame = +3
Query: 246 LLTSLPALPVFGTVSAAVPYTESGGSKDTTRVSQIMKYGFPGLDNIRSYDDYVLSYDRRT 425
LL LP LPV +A +P GG + ++ KYG PGL ++S + YVL YD RT
Sbjct: 36 LLGRLPVLPV--AAAAELPPVP-GGPRGP---GELAKYGLPGLAQLKSRESYVLCYDPRT 89
Query: 426 RVPHWVFEHLTKAHIAKNDQVDRSKCDFMPDESIHPFFRSLNSDYKGSGFDRGHMAAAGN 605
R WV E L + + DR +CDF D+S+H + R+ N+DY+GSGFDRGH+AAA N
Sbjct: 90 RGALWVVEQLRPERLRGDG--DRRECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAAN 147
Query: 606 HR 611
HR
Sbjct: 148 HR 149
>AL441992-12|CAI15412.1| 297|Homo sapiens endonuclease G protein.
Length = 297
Score = 106 bits (255), Expect = 5e-23
Identities = 56/122 (45%), Positives = 74/122 (60%)
Frame = +3
Query: 246 LLTSLPALPVFGTVSAAVPYTESGGSKDTTRVSQIMKYGFPGLDNIRSYDDYVLSYDRRT 425
LL LP LPV +A +P GG + ++ KYG PGL ++S + YVL YD RT
Sbjct: 36 LLGRLPVLPV--AAAAELPPVP-GGPRGP---GELAKYGLPGLAQLKSRESYVLCYDPRT 89
Query: 426 RVPHWVFEHLTKAHIAKNDQVDRSKCDFMPDESIHPFFRSLNSDYKGSGFDRGHMAAAGN 605
R WV E L + + DR +CDF D+S+H + R+ N+DY+GSGFDRGH+AAA N
Sbjct: 90 RGALWVVEQLRPERLRGDG--DRRECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAAN 147
Query: 606 HR 611
HR
Sbjct: 148 HR 149
>AB020523-1|BAA76752.1| 368|Homo sapiens endonuclease G-like
protein-1 protein.
Length = 368
Score = 88.6 bits (210), Expect = 2e-17
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Frame = +3
Query: 234 VDGKLLTSLPALPVFGTVSAAVPYTESGGSKDTTRVSQIMK-YGFPGLDN-IRSYDDYVL 407
V G L AL F + A T G D + +++ +GFP R Y ++ L
Sbjct: 25 VVGAAGAGLAALQFFRSQGAEGALT--GKQPDGSAEKAVLEQFGFPLTGTEARCYTNHAL 82
Query: 408 SYDRRTRVPHWVFEHLTKAHIAKNDQVDRSKCDFMPDESIHPFFRSLNSDYKGSGFDRGH 587
SYD+ RVP WV EH++K+ I + DR C F PD +I P F + N DY GSG+ RGH
Sbjct: 83 SYDQAKRVPRWVLEHISKSKIMGD--ADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGH 140
Query: 588 MAAAGNHRLA 617
MA AGN++ +
Sbjct: 141 MAPAGNNKFS 150
>AL356693-1|CAH72672.1| 157|Homo sapiens nephronophthisis 4
protein.
Length = 157
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 225 CIEVDGKLLTSLPALPVFGTVSAAVPYTESGG 320
C+ D KLLTSL +P S+ V + SGG
Sbjct: 24 CLRRDKKLLTSLVPIPTLSVASSQVLFRASGG 55
>AK127333-1|BAC86935.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ45404 fis, clone BRHIP3029670. ).
Length = 157
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 225 CIEVDGKLLTSLPALPVFGTVSAAVPYTESGG 320
C+ D KLLTSL +P S+ V + SGG
Sbjct: 24 CLRRDKKLLTSLVPIPTLSVASSQVLFRASGG 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,139,166
Number of Sequences: 237096
Number of extensions: 2006749
Number of successful extensions: 3466
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3461
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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