Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m13
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17) 50 2e-06
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 32 0.37
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 31 0.84
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 31 0.84
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 31 1.1
SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06) 30 2.0
SB_23451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 2.6
SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24) 29 4.5
SB_37122| Best HMM Match : rve (HMM E-Value=1.3) 29 4.5
SB_31733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_20803| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-06) 29 4.5
SB_8944| Best HMM Match : RVT_1 (HMM E-Value=1.3e-05) 29 4.5
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_20432| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_46461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 28 7.9
>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
Length = 278
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +3
Query: 312 AVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLF 455
AV+KSRFKSKQ+ ET SRV +L EN+ L ++ ++K+L L+ LF
Sbjct: 209 AVRKSRFKSKQKFIETQSRVEELTEENERLHSRIDIITKELNALRSLF 256
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 309 EAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDL 452
+A + R K K F KL+ EN L+++V +LSK++++LK+L
Sbjct: 457 DAATRYRVKKKDEQSRLFDEAEKLEKENNKLKDEVGSLSKEIEYLKNL 504
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +3
Query: 339 KQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNKLFE 518
K+ QE VSKL+ EN VLEEKVK L + L K+ TE++ ++L +L +
Sbjct: 2891 KRNIQELQRNVSKLEEENAVLEEKVKLLDEASSNL---------KNQTEVQTVELKRLRD 2941
Query: 519 DLPDDRD 539
L D ++
Sbjct: 2942 SLTDAKN 2948
>SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 318 KKSRFKSK-QRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEG 494
K+++ KSK Q +ETFS ++++KTL + F + F + + G
Sbjct: 9 KRAKLKSKGQIFRETFSGAMSYVEAPTFEKDRIKTLKNERIFSQKKTFTKWVNSFLDKSG 68
Query: 495 IDLNKLFEDLPDDR 536
+ +N LFEDL D +
Sbjct: 69 LHVNDLFEDLADGK 82
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +3
Query: 375 KLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNKLFEDLPDDRDTNDK 551
K+K+EN+ LEE VK L ++ +LK+ Q K+ T+++ ++L L + D R +K
Sbjct: 367 KIKSENEALEETVKHLQGEINYLKE----QKKELETKVQSLELKSLSSNSLDFRVAKEK 421
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 32.3 bits (70), Expect = 0.37
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +3
Query: 315 VKKSRFKSKQRTQETFSRVSKLKAENQ----VLEEKVKTLSKQLQFLKDLFFAQAKKDTT 482
+K+SR +K R Q+ +SR+ + +E Q LE + T + ++ L+D A KK+
Sbjct: 402 LKESRCVTK-RVQDDYSRIQRKLSEKQWELEALERDLSTRTDMVRKLRDEKSALEKKNEG 460
Query: 483 ELEGIDLNKLFEDLPDDRDTNDK 551
+ ++ NK F + T+D+
Sbjct: 461 LIRELETNKRFVSTALNNSTDDE 483
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 309 EAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 449
E + S+ KS+ + S++ KLK + Q E+ + L +QLQ+++D
Sbjct: 2078 EPAESSKGKSETSLIQLTSKIEKLKVQLQESSERERNLLEQLQYVRD 2124
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 354 ETFSRVSKLKAENQVLEEKVKTLSKQL-QFLKDLFFAQAKKDTTELEGIDLNKLFEDLPD 530
E+ SR +++ E L++ + + Q+ +F +D F + T E+E ID+ K E L D
Sbjct: 2361 ESKSRFTQINHEVLSLQKDLANKTAQITKFQRDTFDKDNRLTTLEIEKIDIEKKLESLKD 2420
Query: 531 D 533
+
Sbjct: 2421 E 2421
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 339 KQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLF-FAQAKKDTTELEGIDLNK 509
KQR ET S S+LK E + L +++ + + KD+ Q K+ + E IDL K
Sbjct: 773 KQRLAETESASSRLKGEREKLHKELTVMKENNAQWKDMCERIQEDKERLQKEMIDLQK 830
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 336 SKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLK 446
S + E ++ +L+AE LE+KVK+L K++QF K
Sbjct: 706 SDKSLMEKDYQLVQLRAEKASLEKKVKSLQKEIQFAK 742
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 309 EAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLF 455
E V+ K K+ ++ R+S L E Q EE++K L + L LKD F
Sbjct: 1580 EDVQAYETKLKETLRDYEGRLSDLTIEKQRNEERIKGLVRDLSTLKDEF 1628
>SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06)
Length = 222
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 309 EAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLK 446
EA K++R K + + QE + EN+ L +V+ L KQ++ ++
Sbjct: 166 EASKRTREKRRNKEQELLKEKEIKEKENKALRTQVEDLEKQIKDIR 211
>SB_23451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 327 RFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLN 506
R + ++R +E S + +L+ EN+ LE + + K F DT +LEG +
Sbjct: 38 RQEVRERNEERLSGIDELERENRELENRKPLRERIKAIFKKYGFTIKLIDTVDLEGGPVG 97
Query: 507 K 509
K
Sbjct: 98 K 98
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 387 ENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNKLFEDLPDDRD 539
E++ ++ K+K L ++++LK+ AK+ T E L K E+L D+ D
Sbjct: 538 ESESMKGKIKDLEDEVRYLKERLEDMAKEKTRRRE---LEKKIEELQDELD 585
>SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 321 KSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDT 479
+ RF K + + FS + E + EEK T SK+ + KDL + + T
Sbjct: 195 RKRFMRKPKQRPLFSHNQIQRLEKEFKEEKYLTESKRAELSKDLGMTETQVKT 247
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 357 TFSRVSKLKAENQVLEEKVKTLSKQLQFLKDL 452
T S + LKAE + L+++VK L ++L+ KD+
Sbjct: 223 TTSAIQDLKAEVKTLKQEVKNLKRKLKVNKDV 254
>SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24)
Length = 1329
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 336 SKQRTQETFSRVSKLKAENQVLEEKVKTLSKQ---LQFLKDLFFAQAKKDTT 482
+KQ+ + L+++NQ L +K TL K ++L DL AQA +++
Sbjct: 971 NKQKNKHVLPTAKGLQSDNQYLMDKASTLHKLGIIYRYLSDLDIAQAYHESS 1022
>SB_37122| Best HMM Match : rve (HMM E-Value=1.3)
Length = 152
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 392 PSARGESKNFIKTTSVPERLVFCSSKERHHR 484
P A GES+ F++T + ER+ K+++ R
Sbjct: 38 PRANGESEKFMQTLNKTERIATLEGKDKYER 68
>SB_31733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -3
Query: 657 SVDFTKSNLLCVVTKSENSRT*LSVCIISLTLLNTIYHLCPYRLVSLQRACLSRYLPIRW 478
S D K ++LC VT+ NSR VC + L+ + H Y + C ++ RW
Sbjct: 314 SSDPAKKSMLCYVTRQFNSRQ-QEVCRKNPDLMEHVAHGAKYGV----HECRHQFRNRRW 368
Query: 477 CLSLLEQKTSL 445
S + + SL
Sbjct: 369 NCSTIRESGSL 379
>SB_20803| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-06)
Length = 563
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 354 ETFSRVSKLKAENQVLE-EKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNKLFE 518
E +R + LK E ++ E +K + K+ F+ DL K+D E + + LFE
Sbjct: 177 EDLARATLLKREAKIEEMKKARAEGKRAYFILDLIIRDQKQDAAEADEDFQSALFE 232
>SB_8944| Best HMM Match : RVT_1 (HMM E-Value=1.3e-05)
Length = 514
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 392 PSARGESKNFIKTTSVPERLVFCSSKERHHR 484
P A GES+ F++T + ER+ K+++ R
Sbjct: 316 PRANGESEKFMQTLNKTERIATLEGKDKYER 346
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 318 KKSRFKSKQRTQ---ETFSRVSKLKAENQVLEEKVKTL 422
+K + + QRT + +SK+ ENQVLE +VK L
Sbjct: 5037 RKKKKEQNQRTSAMDKVLDSLSKVMKENQVLENEVKAL 5074
>SB_20432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 410 SKNFIKTTSVP-ERLVFCSSKERHHRIGRYRLKQAL*R 520
S + +K T VP E +VFC +R++ +G Y KQ R
Sbjct: 30 SFSVLKPTLVPSEAIVFCRVCQRNNELGTYSNKQTFWR 67
>SB_46461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 817
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 330 FKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 449
F S + T++T ++ + ENQ L ++ + LSK+L K+
Sbjct: 150 FDSCENTEDTGPKLGDMTIENQRLRQENEFLSKELDEFKE 189
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +3
Query: 333 KSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNKL 512
K K+R E+ RV + + LE+++K L KQ++ K + T EL+ + L+K+
Sbjct: 1233 KIKERLAESEDRVDACSSYIEDLEKEIKRLQKQIKKGK-----MRHQQTKELDPLSLDKV 1287
Query: 513 FEDLPDDRD 539
++L D D
Sbjct: 1288 -KNLRDGLD 1295
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,877,354
Number of Sequences: 59808
Number of extensions: 262959
Number of successful extensions: 895
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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