Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m12
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.93 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   0.93 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.0  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   5.0  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   5.0  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    22   5.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.7  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -2

Query: 168 LCRKSLNLC*KLFRGGLVSIWNSSSFGFLNISFIFYFFTS*NHLTYIDK 22
           LC+ + +L  + F   +++I+  S + F  IS  FYFFT+ N +   DK
Sbjct: 216 LCQAADDLN-RYFEVQVLTIFGVSFYFF--ISTFFYFFTTGNIIATYDK 261


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -2

Query: 168 LCRKSLNLC*KLFRGGLVSIWNSSSFGFLNISFIFYFFTS*NHLTYIDK 22
           LC+ + +L  + F   +++I+  S + F  IS  FYFFT+ N +   DK
Sbjct: 212 LCQAADDLN-RYFEVQVLTIFGVSFYFF--ISTFFYFFTTGNIIATYDK 257


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 434 YSFHILFPCNILVYSLH 384
           Y  H+LF C  +++++H
Sbjct: 262 YYMHLLFCCAFIIFTMH 278



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -3

Query: 437 IYSFHILFPCNILVYSLH 384
           I++ H+LF C  + +++H
Sbjct: 175 IFTMHLLFCCAFIFFNMH 192



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 5/17 (29%), Positives = 13/17 (76%)
 Frame = -3

Query: 434 YSFHILFPCNILVYSLH 384
           ++ H+LF C  +++++H
Sbjct: 79  FTVHLLFYCPFIIFTVH 95


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 405 YISVLLTSAGRGRKPKPGLVPITLYS 328
           Y+  L       RKPKPG +   L S
Sbjct: 484 YLEALRAYVDNRRKPKPGTIFAKLLS 509


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 565 RHPKLGSLH*RESLLLPQVFTLHLP 639
           RHP L SL   E  L   V+T  LP
Sbjct: 69  RHPVLKSLIGSEDCLTLNVYTRDLP 93


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 565 RHPKLGSLH*RESLLLPQVFTLHLP 639
           RHP L SL   E  L   V+T  LP
Sbjct: 69  RHPVLKSLIGSEDCLTLNVYTRDLP 93


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 565 RHPKLGSLH*RESLLLPQVFTLHLP 639
           RHP L SL   E  L   V+T  LP
Sbjct: 69  RHPVLKSLIGSEDCLTLNVYTRDLP 93


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 565 RHPKLGSLH*RESLLLPQVFTLHLP 639
           RHP L SL   E  L   V+T  LP
Sbjct: 69  RHPVLKSLIGSEDCLTLNVYTRDLP 93


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 565 RHPKLGSLH*RESLLLPQVFTLHLP 639
           RHP L SL   E  L   V+T  LP
Sbjct: 68  RHPVLKSLIGSEDCLTLNVYTRDLP 92


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 565 RHPKLGSLH*RESLLLPQVFTLHLP 639
           RHP L SL   E  L   V+T  LP
Sbjct: 41  RHPVLKSLIGSEDCLTLNVYTRDLP 65


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 111 WTPSRPERVFNTNSVIFCIMMRLVLF 188
           WTP+    V + N ++F  ++  +LF
Sbjct: 120 WTPAVIFVVLSKNGIVFAGLIVFILF 145


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 93  SSKNSKWTPSRPERVFNTNSV 155
           S+ N  +TPS    ++NT+SV
Sbjct: 32  STSNYLYTPSSTIDLYNTSSV 52


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 93  SSKNSKWTPSRPERVFNTNSV 155
           S+ N  +TPS    ++NT+SV
Sbjct: 32  STSNYLYTPSSTIDLYNTSSV 52


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 122 PPRKSFQHKFSDFLHNDETG 181
           P R S+QH F+    N  TG
Sbjct: 36  PLRTSYQHHFNSPAGNAHTG 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,394
Number of Sequences: 336
Number of extensions: 3819
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)