Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m12
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z73906-5|CAA98116.1| 123|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93372-2|CAB07547.2| 505|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81130-8|CAB03416.1| 347|Caenorhabditis elegans Hypothetical pr... 27 8.6
AY455927-3|AAR26304.1| 347|Caenorhabditis elegans phosphoglucos... 27 8.6
>Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical
protein C17E4.9 protein.
Length = 320
Score = 98.7 bits (235), Expect = 3e-21
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Frame = +2
Query: 116 TKPPRKSFQHKFSDFLHNDETGTILGRTPESWSKILVFYTXXXXXXXXXXXXCMVTFLQQ 295
T P R F +FL+N + GT++GRT +SW +I+VFY C+ F++
Sbjct: 18 TGPARDDVPETFREFLYNKKNGTVMGRTGKSWFQIIVFYIIFYAFLAAFWLTCLTIFMKT 77
Query: 296 FINPRVPRLQQEYSVIGTSPGLGFRP-LPADVRSTLIYYKGTGYESYKFWEDQLIDFLSV 472
++P+VPR + ++IG +PG+G++P L STLI Y +SYK + +Q+ +L+
Sbjct: 78 -LDPKVPRFYGKGTIIGVNPGVGYQPWLKERPDSTLIKYNLRDQKSYKAYLEQMKTYLTK 136
Query: 473 YKKKG-QTAGTGQNIFNCDFRNPPPPGKVCDVDIRSWDP-CIEENHFSFHKSSPCIFL 640
Y +T G N D P C D+ +D C E++ F + PC+ +
Sbjct: 137 YDSNATETRECGAGDSNDDLEK-NPDALPCRFDLSVFDKGCSEKSDFGYKSGKPCVII 193
>Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical
protein F55F3.3 protein.
Length = 317
Score = 85.4 bits (202), Expect = 3e-17
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Frame = +2
Query: 131 KSFQHKFSDFLHNDETGTILGRTPESWSKILVFYTXXXXXXXXXXXXCMVTFLQQFINPR 310
K+ F+ FL+N + GT+LGRT SW +I VFY C+ FL+ ++P+
Sbjct: 20 KAEPETFAQFLYNKDKGTVLGRTGTSWCQITVFYIIFYIFLSAFFIGCLSIFLRT-LDPK 78
Query: 311 VPRLQQEYSVIGTSPGLGFRP-LPADVRSTLIYYKGTGYESYKFWEDQLIDFLSVYKKKG 487
VPR + ++IG +PG+G++P L + STLI + +S++ + QL ++LS YK
Sbjct: 79 VPRFYGKGTIIGVNPGVGYQPWLKENPDSTLIKFNLQDSKSWEPYVKQLDNYLSKYKNTN 138
Query: 488 QTAGTGQNIFNCDFRNPPPPGKVCDVDIRSWDP--CIEENHFSFHKSSPCI 634
+T G + N D C D+ ++ C ++ + + PC+
Sbjct: 139 ETRDCGAS-DNNDALETDTDTFPCRFDLGLFEKANCGAKDQYGYKSGKPCV 188
>Z73906-5|CAA98116.1| 123|Caenorhabditis elegans Hypothetical
protein D2030.4 protein.
Length = 123
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 509 NIFNCDFRNPPPPGKVCDVDIRSWDPCIEENH 604
++ C +N P G CD + +WD C ++H
Sbjct: 68 SLMKCQTQNAPFAGHACDGERGAWDKCEYDDH 99
>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical
protein W09D10.2 protein.
Length = 1335
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = -3
Query: 506 DPCLPSALSSCILTRNQSAGLPKIYSFHILFPCNILVYSLHQREGVGSPSLDLYQSHCTP 327
DP L S L+S +L P F + CN +V + E + P D+ S P
Sbjct: 487 DPALESQLASSVLKLGADIDDPVFAFFLTMAICNTVVVNAKPHEDLMDPDGDIVNSRFAP 546
>Z93372-2|CAB07547.2| 505|Caenorhabditis elegans Hypothetical
protein BE10.2 protein.
Length = 505
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 120 LVSIWNSSSFGFLNISFIFYFFTS*NHLTYIDKTL 16
LV ++ +SSF L ++ F+F NHL+Y+D T+
Sbjct: 367 LVKVYVASSF-LLLLAIFFHFEYDRNHLSYLDCTV 400
>Z81130-8|CAB03416.1| 347|Caenorhabditis elegans Hypothetical
protein T23G11.2 protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 359 LGFRPLPADVRSTLI-YYKGTGYESYKFWEDQLIDFLSVYKKKGQTAGTGQNI-FNCDFR 532
+G L + ++ LI +Y GY + DQ + L +K T G G I FN
Sbjct: 129 IGVYKLSLECKTELIPFYNKFGYSKNLHFLDQRFEELEAPARKSSTPGNGSVILFN---E 185
Query: 533 NPPPPGKVCDVDIRS 577
N P VDIR+
Sbjct: 186 NVLPTNMKLPVDIRA 200
>AY455927-3|AAR26304.1| 347|Caenorhabditis elegans
phosphoglucosamine acetyltransferaseprotein.
Length = 347
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 359 LGFRPLPADVRSTLI-YYKGTGYESYKFWEDQLIDFLSVYKKKGQTAGTGQNI-FNCDFR 532
+G L + ++ LI +Y GY + DQ + L +K T G G I FN
Sbjct: 129 IGVYKLSLECKTELIPFYNKFGYSKNLHFLDQRFEELEAPARKSSTPGNGSVILFN---E 185
Query: 533 NPPPPGKVCDVDIRS 577
N P VDIR+
Sbjct: 186 NVLPTNMKLPVDIRA 200
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,972
Number of Sequences: 27780
Number of extensions: 365063
Number of successful extensions: 1004
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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