Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m09
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.90 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.4  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 260 LQSLRIHNLYSTVPPDLPYCQMEP*KRQPVKVSNPIKN 373
           L+ L + N+  TV     +C+M+P +   + V   IKN
Sbjct: 540 LEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKN 577


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 577 VYIVCYAIGLSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRV 729
           VY +C  IGL+T+     GE+       +    +   T   + +V +LFR+
Sbjct: 28  VYAICKLIGLNTLRIGRKGELKQHKSDYF--YFSFYITSYTLLSVYSLFRI 76


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 577 VYIVCYAIGLSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRV 729
           VY +C  IGL+T+     GE+       +    +   T   + +V +LFR+
Sbjct: 28  VYAICKLIGLNTLRIGRKGELKQHKSDYF--YFSFYITSYTLLSVYSLFRI 76


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 553 WILLVALIVYIVCYAIGLST--VPYVTIGEMFPTNVKL 660
           W+ L+ +    +CYA G  +  V   ++   FP N+ +
Sbjct: 133 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV 170


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 553 WILLVALIVYIVCYAIGLST--VPYVTIGEMFPTNVKL 660
           W+ L+ +    +CYA G  +  V   ++   FP N+ +
Sbjct: 366 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV 403


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 553 WILLVALIVYIVCYAIGLST--VPYVTIGEMFPTNVKL 660
           W+ L+ +    +CYA G  +  V   ++   FP N+ +
Sbjct: 366 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV 403


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 40  YYYLKFERSDRAERSLRSLRSGDIRTELKSIELNV 144
           YY  K +R D  ER  + L    +    ++IE+N+
Sbjct: 401 YYRHKQKRRDERERYFKGLDEEKLPESGENIEINL 435


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 165 RVMERFIHRSHQQK 206
           ++ME+F  RSH+Q+
Sbjct: 311 KLMEKFPERSHEQQ 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,362
Number of Sequences: 336
Number of extensions: 4497
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)