Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m09
(783 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 62 4e-10
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 38 0.007
SB_18456| Best HMM Match : Syja_N (HMM E-Value=1.9e-12) 31 1.1
SB_57705| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_46144| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_35660| Best HMM Match : dTDP_sugar_isom (HMM E-Value=0) 30 1.8
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 30 1.8
SB_3668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08) 29 4.2
SB_23067| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_23855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 62.5 bits (145), Expect = 4e-10
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 17/265 (6%)
Frame = +1
Query: 7 IITFCFLPESPYYYLKFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGSWSDLF 186
++ F+PE+P + L +R A ++ R + E + + D S ++ F
Sbjct: 214 VVLMFFVPETPRWSLSHKRRRDALDAMMWFRGPEADVEEECYRIEATMDNTQSMSCAE-F 272
Query: 187 TEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKSIEPY 366
K ++I++ + QQFCG A++ S IF+ +++ K++
Sbjct: 273 CRPAIMKPLFISIALMFFQQFCGINAILFNSASIFH---------QAGFQDS--KAV--- 318
Query: 367 QESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFY--DTNKQAV 540
S+IIG VQ ++ L+VD+ GRK +G YF Y T +Q
Sbjct: 319 --SVIIGAVQFVGTGIACLVVDKAGRKLLLWTTALGMTVSLIALGFYFELYIPTTQEQPT 376
Query: 541 QN---------------VSWILLVALIVYIVCYAIGLSTVPYVTIGEMFPTNVKLYASCI 675
+SW+ + +++V+ + +A+ VP++ + E+FP + AS I
Sbjct: 377 PTPALLESIHHSIPAGKISWLAITSIVVFNLVFALAWGPVPWLVMSEIFPLQARGIASSI 436
Query: 676 AHIYTGVAMFAVQNLFRVVEQAYKI 750
+ + FAV F +E A I
Sbjct: 437 STLCNWSLAFAVTKTFVNIEDAITI 461
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +1
Query: 358 EPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQA 537
+P I+IG VQ +S+ L+DR GR+ T YF+
Sbjct: 375 DPTGVPILIGAVQFVASAISLALIDRGGRRFLLIVAGVGMSISCFTCAVYFFITVNFGMT 434
Query: 538 VQNVSWILLVALIVYIVCYAI 600
+++W+ + ++ VYIV +A+
Sbjct: 435 EVDIAWLSVTSVAVYIVGFAL 455
>SB_18456| Best HMM Match : Syja_N (HMM E-Value=1.9e-12)
Length = 660
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 326 PFGSMVGPVVQLNINCEYATTAALPQNCCTVKTPKVIHIAFLLVASVNK 180
PF + PVV N+ E+ +PQ C +T K H+ F V K
Sbjct: 9 PFPCLFPPVVPKNVLAEWLDVQKVPQYHC-AETEKYAHVTFFFNGGVEK 56
>SB_57705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 154 MKNRGSWSDLFTEATNKKAMWITLGV--FTVQQFCGSAAVVAYSQFIFNCTTGPTILPNG 327
+K S S + + K +W T + ++F GS V + F+CT GP ++ G
Sbjct: 474 LKPTSSSSQVIDDKCPCKEIWETRNTSKYRRKKFSGSGKV----ESTFSCTCGPNVVQRG 529
Query: 328 TLEETTRK 351
TL + RK
Sbjct: 530 TLLQKKRK 537
>SB_46144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 305 PVVQLNINCEYATTAALPQNCCTVKTPKVI 216
P + + +YAT +LPQ+ C VK PK I
Sbjct: 16 PGSNIYVKRQYATRLSLPQDVCAVKMPKNI 45
>SB_35660| Best HMM Match : dTDP_sugar_isom (HMM E-Value=0)
Length = 229
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +1
Query: 109 IRTELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFI 288
I E+ + ++++ED G W + A NK+ +W+ G G ++F+
Sbjct: 144 ISGEVFDVAVDIREDSPTFGKWVGEYLSAENKRQLWVPEGFAH-----GFYVTSEDAEFV 198
Query: 289 FNCT 300
+ CT
Sbjct: 199 YKCT 202
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +1
Query: 25 LPESPYYYLKFERSDRAERSLRSLRSG-DIRTELKSIELNVQEDMKNRGSWS--DLFTEA 195
LPESP + + + A +L +R D+ EL+++ + + K R +
Sbjct: 228 LPESPRWLISKCKYAEARAALCKIRGRTDVDRELEAVRRTCKVERKERSGQVLIRILRFP 287
Query: 196 TNKKAMWITLGVFTVQQFCGSAAVVAYSQFI 288
++A+ + + +QQ CG V+ YS I
Sbjct: 288 NTRRALLVGCMLQAIQQLCGINTVMYYSATI 318
>SB_3668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 29.9 bits (64), Expect = 2.4
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Frame = +1
Query: 496 IGTYFYFYDTNKQAVQNVSWILLVALIVYIVCYAIGLSTVPYVTIGEMFPTNVKLYASCI 675
+G YF + NV + + + I C+ IGL T+ Y E++ +KL CI
Sbjct: 100 VGPYFLVTMLAPYFIHNVPYSVRIVFIY--ACFTIGLFTIVYAK--EVY---MKLVGICI 152
Query: 676 AHIYTG---VAMFAVQNLF-RVVEQAYKIYTG---VLGIXYF 780
+ G V+ F + + +V AY TG VLG Y+
Sbjct: 153 TSLGAGTGEVSFFTLTAFYEQVTVSAYSAGTGTGFVLGPLYY 194
>SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08)
Length = 857
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 307 PTILPNGTLEETTRKSIEPYQES 375
P LP G L E + K I P+QES
Sbjct: 435 PVALPRGPLREISNKPIPPFQES 457
>SB_23067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 148 EDMKNRGSWSDLFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPT 312
ED + RGSW D + + A W+ + F + VV Y+ + C G T
Sbjct: 152 EDSQPRGSWWDGIRDVVSLWAQWLLMFAFLI-----IYVVVTYATELHGCPRGYT 201
>SB_23855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +1
Query: 523 TNKQAVQNVSWILL-VALIV---YIVCYAIGLSTVPYVTIGEMFPTNVKLYASCIAHIYT 690
TN + N+++++ VA+I Y++ ++ + Y+ TN+ + +A++ T
Sbjct: 6 TNVAVITNMAYLITNVAVITNMAYLITNVAVITNMAYLITNVAVITNMAYLITNMAYLIT 65
Query: 691 GVAMFAVQNLFRVVEQAYKIYTGVLG 768
VA + + AY I T V G
Sbjct: 66 NVAYLITNMAYLITNMAYLI-TNVAG 90
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,896,265
Number of Sequences: 59808
Number of extensions: 599173
Number of successful extensions: 1312
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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