Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m08
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 173 7e-44
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 100 1e-21
AC084156-2|AAK68490.2| 243|Caenorhabditis elegans Hypothetical ... 88 6e-18
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 40 0.002
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 38 0.007
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 38 0.009
U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical pr... 36 0.021
U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical pr... 31 0.58
U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 30 1.3
AC025726-24|AAK73926.2| 447|Caenorhabditis elegans Hypothetical... 29 2.4
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 29 3.1
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 29 3.1
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 29 3.1
Z81049-5|CAE17733.2| 197|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL023835-9|CAA19493.2| 397|Caenorhabditis elegans Hypothetical ... 28 5.4
U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical pr... 28 7.2
U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine rece... 27 9.5
AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical ... 27 9.5
AF078787-3|AAC26951.1| 335|Caenorhabditis elegans Hypothetical ... 27 9.5
AC024785-4|AAF60602.3| 466|Caenorhabditis elegans C-type lectin... 27 9.5
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 173 bits (422), Expect = 7e-44
Identities = 81/161 (50%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Frame = +2
Query: 206 AEIIPDHILELIFLYLRLRDIRNCALVCKTWYRMLSDENNEVWRYHCYRRLTEEMMKSD- 382
A +P +L IF YL L+D+R+ L C +W LS E++++W+Y ++L E +
Sbjct: 82 ASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSDIWQYLLGKKLPEAAVSDPF 141
Query: 383 LLSCLRTYREKLRAYCHAWNPYDCSRNIYIKPNGFTLHRNPVAQSTDACRGKVGFYRGRH 562
LL+ L + ++KLRA+ AWN D SRN YI+ NGFT+HR PVAQSTD RGK G +G H
Sbjct: 142 LLAELGSAKKKLRAWYFAWNTSDISRNNYIRTNGFTVHRQPVAQSTDGVRGKRGISKGVH 201
Query: 563 AWEIIWEGPLGTVAVIGVSTRDAPLQCXGYVGLLGSDELSW 685
A++I W+GPLGTVAV+G++T+ A L C GYV LLGSD+ SW
Sbjct: 202 AFDITWDGPLGTVAVVGIATKHAALHCVGYVALLGSDDQSW 242
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 100 bits (239), Expect = 1e-21
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +2
Query: 431 HAWNPYDCSRNIYIKPNG-FTLHRNPVAQSTDACRGKVGFYRGRHAWEIIW-EGPLGTVA 604
H+WNP D S NI++K FT HR+PVAQSTD RGK+G+ RG H W+I W E GT A
Sbjct: 114 HSWNPEDRSLNIFVKDEDKFTFHRHPVAQSTDCIRGKMGYSRGFHVWQIEWPERQRGTHA 173
Query: 605 VIGVSTRDAPLQCXGYVGLLGSDELSW 685
V+GV+T++APL GY L+G+ + S+
Sbjct: 174 VVGVATKNAPLHAAGYTALIGTTDESY 200
>AC084156-2|AAK68490.2| 243|Caenorhabditis elegans Hypothetical
protein Y46E12BL.3 protein.
Length = 243
Score = 87.8 bits (208), Expect = 6e-18
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +2
Query: 431 HAWNPYDCSRNIYIKPNG-FTLHRNPVAQSTDACRGKVGFYRGRHAWEIIW-EGPLGTVA 604
H+WNP D S NI +K TL+R+PV TD RGK+G+ RG H W+I W E GT A
Sbjct: 25 HSWNPDDRSPNIIVKDQDKLTLYRHPVPNCTDCIRGKMGYSRGFHVWQIEWPERQRGTHA 84
Query: 605 VIGVSTRDAPLQCXGYVGLLGSDELSW 685
V+GV+T++APLQ Y L+GS+ S+
Sbjct: 85 VVGVATKNAPLQAAEYTTLVGSNNESY 111
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 155 YFYNKMRQIHRYKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWYRMLSDENNEVW 334
+F + +Q + + E +PD +L IF YL + I LVCK W ++ +N +W
Sbjct: 32 FFTDSNQQYYTERNQYTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRW--RVTSQNPLLW 89
Query: 335 RYHCYR 352
++ +R
Sbjct: 90 KFVSFR 95
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 185 RYKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWYRMLSDENNEVWRYHCYR 352
R ++ E +PD +L IF YL + I LVCK W ++ +N +W++ +R
Sbjct: 25 RTRRTKTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRW--RVTSQNPLLWKFVSFR 78
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 209 EIIPDHILELIFLYLRLRDIRNCALVCKTWYRMLSDENNEVWRYHCYR 352
E +PD +L IF YL + I LVCK W ++ +N +W++ +R
Sbjct: 67 EKLPDKVLRDIFQYLSPKQINQVGLVCKRW--RVTSQNPLLWKFVSFR 112
>U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical
protein F56F10.2 protein.
Length = 377
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 206 AEIIPDHILELIFLYLRLRDIRNCALVCKTWYRMLSDENNEVWR 337
A+ HIL +F YL + D+ NC LVC W + + +E+ R
Sbjct: 99 AQDFESHILADVFKYLDIDDLLNCKLVCWKWNATIGENASELAR 142
>U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical
protein F48E8.7a protein.
Length = 421
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 188 YKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWY 301
+KKY+ IPD I E IF L+ +D+ + LVC +Y
Sbjct: 88 FKKYS----IPDEITEQIFSNLKKKDLLSAMLVCHRFY 121
>U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical
protein F48E8.7b protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 188 YKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWY 301
+KKY+ IPD I E IF L+ +D+ + LVC +Y
Sbjct: 85 FKKYS----IPDEITEQIFSNLKKKDLLSAMLVCHRFY 118
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/84 (29%), Positives = 38/84 (45%)
Frame = +2
Query: 179 IHRYKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWYRMLSDENNEVWRYHCYRRL 358
I + KK+ F D + E+I +L L +++ A +L N+ W +HC R+
Sbjct: 126 ISQAKKWIFEYCTSDQLREIILSFL-LNKVKDEASGEYLRLHILYLIND--WAFHCQRKK 182
Query: 359 TEEMMKSDLLSCLRTYREKLRAYC 430
E MK L Y K+ AYC
Sbjct: 183 EENQMK-----MLARYVPKMYAYC 201
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/84 (29%), Positives = 38/84 (45%)
Frame = +2
Query: 179 IHRYKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWYRMLSDENNEVWRYHCYRRL 358
I + KK+ F D + E+I +L L +++ A +L N+ W +HC R+
Sbjct: 126 ISQAKKWIFEYCTSDQLREIILSFL-LNKVKDEASGEYLRLHILYLIND--WAFHCQRKK 182
Query: 359 TEEMMKSDLLSCLRTYREKLRAYC 430
E MK L Y K+ AYC
Sbjct: 183 EENQMK-----MLARYVPKMYAYC 201
>AC025726-24|AAK73926.2| 447|Caenorhabditis elegans Hypothetical
protein Y71G12B.25 protein.
Length = 447
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 386 VNQISSFLLLIFYNNDISTLHYSHH*AFYTKSYIPTHSFEYLSI 255
V ++ F+L I+ + + LHY+ AFYT + + F Y+S+
Sbjct: 385 VQWLTHFILPIYASQLVEHLHYTF--AFYTSALLSVFLFAYISV 426
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 3.1
Identities = 26/106 (24%), Positives = 41/106 (38%)
Frame = +2
Query: 179 IHRYKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWYRMLSDENNEVWRYHCYRRL 358
+H +K A +P H +L +L L R IRN +C YR+ YH R
Sbjct: 262 LHCFKCLPSAADLPTHDCDLTYLCLDCRPIRN---MC-NGYRLFRHRTKFHRGYHSGFRC 317
Query: 359 TEEMMKSDLLSCLRTYREKLRAYCHAWNPYDCSRNIYIKPNGFTLH 496
+ K LR +R+ + + + C +I T+H
Sbjct: 318 PDCNQKFLTPRKLRKHRKMAHVFSRTFQCHFC-EEFFISDTAVTIH 362
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 128 KIVHLKLNAYFYNKMRQIHR-YKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWYR 304
KIVH +L+ Y K+ R + F +P H++ELI + +++C V +W
Sbjct: 58 KIVH-RLSHYQLGKVDNFIRPMLQRDFISNLPAHLVELILFNVNSDSLKSCEEVSTSWRC 116
Query: 305 MLSDENNEVWRYHCYRRLTEEMMKSDLL 388
L+ R +++L E+ ++SD L
Sbjct: 117 ALA-------RGQHWKKLIEKNVRSDSL 137
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 128 KIVHLKLNAYFYNKMRQIHR-YKKYAFAEIIPDHILELIFLYLRLRDIRNCALVCKTWYR 304
KIVH +L+ Y K+ R + F +P H++ELI + +++C V +W
Sbjct: 58 KIVH-RLSHYQLGKVDNFIRPMLQRDFISNLPAHLVELILFNVNSDSLKSCEEVSTSWRC 116
Query: 305 MLSDENNEVWRYHCYRRLTEEMMKSDLL 388
L+ R +++L E+ ++SD L
Sbjct: 117 ALA-------RGQHWKKLIEKNVRSDSL 137
>Z81049-5|CAE17733.2| 197|Caenorhabditis elegans Hypothetical
protein C48D1.5 protein.
Length = 197
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 378 LIYFRASELIEKNLEHIAMLGIRMIVRETFISNQ-MDLLYTEIL*H---RVQMLVEE 536
LI RA + + ++H+ G R VR+TF+ + ++++Y + + R+Q +VE+
Sbjct: 42 LIEMRAGHVYDPLIDHLLEDGCRYPVRQTFLEREFIEVVYGNVTGYVSGRIQTIVED 98
>AL023835-9|CAA19493.2| 397|Caenorhabditis elegans Hypothetical
protein Y37A1B.10 protein.
Length = 397
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = -1
Query: 324 LFSSLSILYQVLHTNAQFRISLNLRYKKISSKIWS 220
LF +LSIL ++H FR+S +Y++++ K++S
Sbjct: 329 LFINLSILNAIVHCVISFRVS--TQYREVAKKLFS 361
>U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical
protein C45G9.8 protein.
Length = 465
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +2
Query: 290 KTWYRMLSDENNEVWRYHCYRRLTEEMMKSDLLSCLRTYREKLRAYCH 433
++++R +S E + R C++ +E +M + LLS ++ R+ R+ H
Sbjct: 22 RSYFRWVSTETSNNTRSKCHKLKSESIMTTSLLSRMQIDRDLRRSTEH 69
>U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine
receptor, class x protein2 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 574 NFPSMTTTIKSNLSSTSICTLCYRISV 494
N+P+M + N +S++I T+CY + V
Sbjct: 174 NYPNMFIDLPLNTTSSTIATICYAMIV 200
>AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical
protein Y39C12A.7 protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +2
Query: 131 IVHLKLNAYFYN-KMRQIHRY---KKYAFAEII 217
I++ KLN Y+YN +R++H Y ++Y +E I
Sbjct: 161 IINYKLNRYYYNCSLRKLHTYSLTERYQISENI 193
>AF078787-3|AAC26951.1| 335|Caenorhabditis elegans Hypothetical
protein T17A3.4 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 416 VFLYKF*GTKVNQISSFLLLIFYNNDISTLHYSH 315
VF +K G + +I++ +L IF+ ++ STL SH
Sbjct: 107 VFEWKPSGIRFKEIANHVLEIFHKSEFSTLMISH 140
>AC024785-4|AAF60602.3| 466|Caenorhabditis elegans C-type lectin
protein 72 protein.
Length = 466
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 356 IFYNNDISTLHYSHH*AFYTKSYIP 282
I+ N D+ T+ + +FYT S+IP
Sbjct: 439 IYTNTDVETMQIRFYSSFYTNSWIP 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,242,928
Number of Sequences: 27780
Number of extensions: 367638
Number of successful extensions: 867
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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