Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m06
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34970| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_28168| Best HMM Match : Myb_DNA-binding (HMM E-Value=3) 45 5e-05
SB_35432| Best HMM Match : HALZ (HMM E-Value=1.3) 45 5e-05
SB_3633| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_17228| Best HMM Match : DivIVA (HMM E-Value=2.5) 44 1e-04
SB_43728| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_269| Best HMM Match : ubiquitin (HMM E-Value=1.2e-09) 31 0.81
SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30) 31 1.1
SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9) 31 1.1
SB_11533| Best HMM Match : Baculo_PEP_C (HMM E-Value=3.6) 31 1.1
SB_58109| Best HMM Match : Methylase_S (HMM E-Value=2.4) 30 1.9
SB_51839| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 30 1.9
SB_38578| Best HMM Match : RVT_1 (HMM E-Value=0.018) 30 1.9
SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_26855| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32) 30 1.9
SB_52393| Best HMM Match : LEA_4 (HMM E-Value=8) 30 1.9
SB_41523| Best HMM Match : bZIP_1 (HMM E-Value=8.8) 30 1.9
SB_25123| Best HMM Match : LEA_4 (HMM E-Value=8) 30 1.9
SB_3080| Best HMM Match : Methylase_S (HMM E-Value=2.6) 30 1.9
SB_13289| Best HMM Match : DUF543 (HMM E-Value=10) 29 3.3
SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_36281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_29501| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_9804| Best HMM Match : BSD (HMM E-Value=8.7) 28 7.5
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_34970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 196 QSRKAAPMTKDETMILAELVAAKKHF-NNKATNARNNKLKEQAWQTLVNDFNSSIRRFPR 372
+S++ + +E I+ E VA KK N+K TN+ NKLK W+ + + N ++ PR
Sbjct: 697 KSKRKPNFSIEEITIITESVAEKKEILNSKLTNSVTNKLKNSVWEEIKDKVN-AVGVAPR 755
Query: 373 TPSQLRLKWENL 408
+ +++ KW+NL
Sbjct: 756 SLVEVKDKWKNL 767
>SB_28168| Best HMM Match : Myb_DNA-binding (HMM E-Value=3)
Length = 121
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 196 QSRKAAPMTKDETMILAELVAAKKHF-NNKATNARNNKLKEQAWQTLVNDFNSSIRRFPR 372
+S++ + +E I+ E VA KK N+K TN+ NKLK W+ + + N ++ PR
Sbjct: 5 KSKRKPNFSIEEITIITESVAEKKEILNSKLTNSVTNKLKNSVWEEIKDKVN-AVGVAPR 63
Query: 373 TPSQLRLKWENL 408
+ +++ KW+NL
Sbjct: 64 SLVEVKDKWKNL 75
>SB_35432| Best HMM Match : HALZ (HMM E-Value=1.3)
Length = 206
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 196 QSRKAAPMTKDETMILAELVAAKKHF-NNKATNARNNKLKEQAWQTLVNDFNSSIRRFPR 372
+S++ + +E I+ E VA KK N+K TN+ NKLK W+ + + N ++ PR
Sbjct: 5 KSKRKPNFSIEEITIITESVAEKKEILNSKLTNSVTNKLKNSVWEEIKDKVN-AVGVAPR 63
Query: 373 TPSQLRLKWENL 408
+ +++ KW+NL
Sbjct: 64 SLVEVKDKWKNL 75
>SB_3633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 196 QSRKAAPMTKDETMILAELVAAKKHF-NNKATNARNNKLKEQAWQTLVNDFNSSIRRFPR 372
+S++ + ++ I+ E VA KK N+K TN NKLK W+ + + N ++ PR
Sbjct: 153 KSKRKPNFSIEKITIITESVAEKKEILNSKLTNVVTNKLKNSVWEEIKDKVN-AVGVAPR 211
Query: 373 TPSQLRLKWENL 408
+ +++ KWENL
Sbjct: 212 SLVEVKDKWENL 223
>SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = +1
Query: 196 QSRKAAPMTKDETMILAELVAAKKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
+S++ + +E I+ E VA KK + K TNA NKLK W+ + + N ++ P++
Sbjct: 5 KSKRKPNFSIEEITIITESVAEKKEID-KLTNAVTNKLKNSVWEEIKDKVN-AVGVAPQS 62
Query: 376 PSQLRLKWENL 408
+++ KWENL
Sbjct: 63 LVEVKDKWENL 73
>SB_17228| Best HMM Match : DivIVA (HMM E-Value=2.5)
Length = 160
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 196 QSRKAAPMTKDETMILAELVAAKKHF-NNKATNARNNKLKEQAWQTLVNDFNSSIRRFPR 372
+S++ + +E + E VA KK N+K TNA NKLK W+ + + N ++ PR
Sbjct: 5 KSKRKPNFSIEEITNITESVAEKKEILNSKLTNAVTNKLKNSVWEEIKDKVN-AVGVAPR 63
Query: 373 TPSQLRLKWENL 408
+ +++ KW+NL
Sbjct: 64 SLVEVKDKWKNL 75
>SB_43728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 196 QSRKAAPMTKDETMILAELVAAKKHF-NNKATNARNNKLKEQAWQTLVNDFNS 351
+S++ + +E I+ E VA KK N+K TNA NKLK W+ + + N+
Sbjct: 5 KSKRKPNFSIEEITIITESVAEKKEILNSKLTNAVTNKLKNSVWEEIKDKVNA 57
>SB_269| Best HMM Match : ubiquitin (HMM E-Value=1.2e-09)
Length = 414
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 274 NNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWE 402
+ K TN NN++K++ W + N+ + RT ++R KW+
Sbjct: 245 SKKFTNNLNNQIKQKVWSDITAKVNAVCVAY-RTSDEVRAKWK 286
>SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30)
Length = 575
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + +F +T
Sbjct: 118 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSKFYKT 154
>SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9)
Length = 324
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + +F +T
Sbjct: 118 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSKFYKT 154
>SB_11533| Best HMM Match : Baculo_PEP_C (HMM E-Value=3.6)
Length = 491
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 465 LFVSNNTLINMIFSSGCRSI*NNYALCYRLEVVRIADEIL 584
LF N LIN + + + N LC +LE VR+A E+L
Sbjct: 116 LFKRINELINEVMDAEANDVVNLETLCCQLEGVRVAVEVL 155
>SB_58109| Best HMM Match : Methylase_S (HMM E-Value=2.4)
Length = 228
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 41 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 77
>SB_51839| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 73 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 109
>SB_38578| Best HMM Match : RVT_1 (HMM E-Value=0.018)
Length = 472
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 46 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 82
>SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1800
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 1559 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 1595
>SB_26855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 21 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 57
>SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32)
Length = 775
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 313 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 349
>SB_52393| Best HMM Match : LEA_4 (HMM E-Value=8)
Length = 203
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 156 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 192
>SB_41523| Best HMM Match : bZIP_1 (HMM E-Value=8.8)
Length = 257
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 192 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 228
>SB_25123| Best HMM Match : LEA_4 (HMM E-Value=8)
Length = 294
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 212 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 248
>SB_3080| Best HMM Match : Methylase_S (HMM E-Value=2.6)
Length = 358
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRT 375
K+ + NKATN R +KE WQ +D + F +T
Sbjct: 21 KRKWRNKATNCRRKAIKEY-WQQKADDLKAKPSEFYKT 57
>SB_13289| Best HMM Match : DUF543 (HMM E-Value=10)
Length = 319
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -2
Query: 150 NYYYQCSS*ILTEFILFHCSSLIINTLRIIN 58
N+YYQ SS I+ I+ H SS+I + IIN
Sbjct: 207 NHYYQSSSIIIIIIIINHQSSIINHQSSIIN 237
>SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 839
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -3
Query: 485 CVIRDKQSTNYTNLTKVVSYVAVAFFKFSHFSRSCDGV 372
C + ++S + N+ V+ + + +F+F+ FSR C V
Sbjct: 204 CAEKFRKSLGFRNVGAVLKDIELEYFRFTIFSRKCTQV 241
>SB_36281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 542 KSIIISNTTAT*RKNHVYQCVIRDKQSTNYTNLTKVVSYVAVAFFKFSHFSRSCDGVRGK 363
+S++IS + +T K + ++S + N + V + F K +R+C G RGK
Sbjct: 235 QSLVISESDSTRMKELLRWAEKVKQKSCSVGNFA--TNLVKLLFTKEELLNRNCTGSRGK 292
Query: 362 RRIDELK-SFTRVC 324
+D K +F R C
Sbjct: 293 TALDADKLNFVRYC 306
>SB_29501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 542 KSIIISNTTAT*RKNHVYQCVIRDKQSTNYTNLTKVVSYVAVAFFKFSHFSRSCDGVRGK 363
+S++IS + +T K + ++S + N + V + F K +R+C G RGK
Sbjct: 270 QSLVISESDSTRMKELLRWAEKVKQKSCSVGNFA--TNLVKLLFTKEELLNRNCTGSRGK 327
Query: 362 RRIDELK-SFTRVC 324
+D K +F R C
Sbjct: 328 TALDADKLNFVRYC 341
>SB_9804| Best HMM Match : BSD (HMM E-Value=8.7)
Length = 89
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 247 ELVAAKKHFNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWEN 405
E AAK FNNK ++ + +E +T+ ++ I +L+ KW++
Sbjct: 9 ETPAAKDEFNNKEPENKDKEKEETDKKTVDSENEDKINALLAEKHELQRKWDD 61
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 165 LSSSLENISFSVKKGSTHDKR*DDDSSRTCGGEKT 269
+SS+L+++ SV K S +KR DD GG ++
Sbjct: 144 VSSTLDDMGSSVAKDSDEEKRKSDDDENKEGGVRS 178
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,876,315
Number of Sequences: 59808
Number of extensions: 334648
Number of successful extensions: 816
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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